Gene AFE_2901 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAFE_2901 
SymbolntrC 
ID7136313 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidithiobacillus ferrooxidans ATCC 23270 
KingdomBacteria 
Replicon accessionNC_011761 
Strand
Start bp2577223 
End bp2578629 
Gene Length1407 bp 
Protein Length468 aa 
Translation table11 
GC content63% 
IMG OID643531253 
Productnitrogen regulation protein NR(I) 
Protein accessionYP_002427269 
Protein GI218667003 
COG category[T] Signal transduction mechanisms 
COG ID[COG2204] Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains 
TIGRFAM ID[TIGR01818] nitrogen regulation protein NR(I) 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACACAAG TCTGGATTAT CGATGACGAC CCTTCCATTC GCTGGGTTTT GGAGAAGGCG 
TTGACTCAGG CCGATATCCT GGTGCGCAGC TTTGCAGACG CCGACAGCGC GCTGCGGGCC
TTGGGGCGTG AGCAGCCAGG GGCCGTTGTC ACCGATCTGC GTATGCCCGG CCTGGACGGA
TTGGCGTTTC TGCGCGAAGT TCAGTCGCGC TGGCCAAAAC TGCCGGTGAT CGTGATGACG
GCGCACTCTG ATCTCGACAA TGCCGTCGCC GCTTTTCAAA GTGGGGCCTT TGAGTATCTG
CCCAAGCCGT TTGACATGGA CGAGGCGGTT ACGCTGGTGC AGCGCGCCCT CGGCAGCCGG
GCTGGACCGG GCGCGGCGGG TGTGGAGGAG AGCGATCCGG CGGAAATGAT CGGTGAGGCT
CCGGCCATGC AAGAGGTGTT TCGTGCCATC GGGCGTCTGT CGCGCTCACA GATCAATGTG
CTGATTACCG GCGAATCGGG ATCCGGCAAG GAACTGGTGG CCAGTGCACT GCACCGGCAC
AGCCCCCGTG CGCGCGGACC TTTCATTGCC ATCAACACGG CGGCCATTCC CGCCGAGTTG
CTGGAATCGG AACTTTTCGG CCATGAAAAG GGCGCTTTTA CCGGGGCGGT GCAGACTCGG
CAGGGGCGCT TCGAGCAGGC CTCCGGGGGA ACCCTCTTTC TGGATGAAAT CGGCGATATG
CCGGCCGCCC TGCAAACGCG CCTGCTGCGG GTGCTTTCCG ACGGCACTTT CTATCGGGTC
GGTGGCCACG CGCCCCAGCG TGCGGACGTC CGCGTCCTCG CCGCGACCCA CCAGAACCTC
GAAGCCAAGG TGCGCGATGG CAGCTTCCGG GAAGATCTCT ACCACCGTCT CAACGTCATC
CATATCCATC TTCCGCCCAT ACGCGAGCGG CGTGAGGACA TTCCGCGTCT GGCCCGCCAT
TTTCTCCGTC GTAGCGCGGA GCAACTGGAT GTCGAGCGGC GAATATTGAG CCCGGAGGCG
GAGTCCGCCT TCATGAACTG GCATTGGCCC GGCAATGTGC GCCAATTGGA AAACGTCTGT
CGCTGGATTA CGGTGATGGC ACCCACCCGC GAGGTCCAGG TGACGGATTT GCCGCCGGAA
ATGGCCGCAT CGCCGATGTC CGCCATGATG CCGGATCCGA ACACCCAGGA TTGGCGCCTG
CTGCTGGGGG CGGTGGTGCG GCAGCGTCTC GCTGGCGGTG AAGAAGCCTT GCTGGACAAG
ATTCAGCCGC TGTTCGAACG CTGTCTGCTG GAAGCGGCCC TGCAACATAC CCGTGGCCAT
AAGCAGAGCG CCGCGCACAA ACTCGGGTGG GGGCGCAATA CGCTCACCCG CAAGCTGAAA
GAGTTGGGCA TGGCGGAGGA TACGTAA
 
Protein sequence
MTQVWIIDDD PSIRWVLEKA LTQADILVRS FADADSALRA LGREQPGAVV TDLRMPGLDG 
LAFLREVQSR WPKLPVIVMT AHSDLDNAVA AFQSGAFEYL PKPFDMDEAV TLVQRALGSR
AGPGAAGVEE SDPAEMIGEA PAMQEVFRAI GRLSRSQINV LITGESGSGK ELVASALHRH
SPRARGPFIA INTAAIPAEL LESELFGHEK GAFTGAVQTR QGRFEQASGG TLFLDEIGDM
PAALQTRLLR VLSDGTFYRV GGHAPQRADV RVLAATHQNL EAKVRDGSFR EDLYHRLNVI
HIHLPPIRER REDIPRLARH FLRRSAEQLD VERRILSPEA ESAFMNWHWP GNVRQLENVC
RWITVMAPTR EVQVTDLPPE MAASPMSAMM PDPNTQDWRL LLGAVVRQRL AGGEEALLDK
IQPLFERCLL EAALQHTRGH KQSAAHKLGW GRNTLTRKLK ELGMAEDT