| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pfl01_0821 |
|---|
| Symbol | |
|---|
| ID | 3715477 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas fluorescens Pf0-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007492 |
|---|
| Strand | + |
|---|
| Start bp | 968853 |
|---|
| End bp | 969413 |
|---|
| Gene Length | 561 bp |
|---|
| Protein Length | 186 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 65% |
|---|
| IMG OID | |
|---|
| Product | two component Fis family transcriptional regulator |
|---|
| Protein accession | YP_346553 |
|---|
| Protein GI | 77457048 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 23 |
|---|
| Plasmid unclonability p-value | 0.0974274 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 10 |
|---|
| Fosmid unclonability p-value | 0.860547 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGTGACG AAATCCAAGT CGAAGGCGAA GAACTGCCGC ATTTGCTGCT GGTCGACGAT
GACGCGACCT TCACCCGGGT GATGGCCCGT GCCATGGCCC GCCGTGGTTT CCGCGTCAGC
ACCGCCGGTT CCGCCGAGGA AGGCCTGACC ATCGCCCAGG CCGATCTGCC GGATTACGCC
GCGCTGGACC TGAAAATGGA CGGCGATTCC GGTCTGGTGC TGCTGCCAAA ACTGCTGGAG
CTGGACCCGG AAATGCGCGT GGTGATCCTC ACCGGTTACT CGAGCATTGC CACGGCGGTT
GAAGCGATCA AGCGCGGCGC CTGCAACTAT CTGTGCAAAC CGGCGGATGC CGACGATGTG
CTGGCAGCGC TGCTGTCCGA ACACGCCGAC CTCGACAGCC TGGTGCCGGA AAACCCGATG
TCGGTGGATC GCCTGCAGTG GGAGCACATC CAGCGCGTGC TGACCGAGCA CGAAGGCAAC
ATCTCCGCCA CGGCCCGCGC CCTGGGCATG CACCGCCGCA CCCTGCAGCG CAAATTGCAG
AAGCGCCCGG TTCGTCGCTG A
|
|---|
| Protein sequence | MSDEIQVEGE ELPHLLLVDD DATFTRVMAR AMARRGFRVS TAGSAEEGLT IAQADLPDYA
ALDLKMDGDS GLVLLPKLLE LDPEMRVVIL TGYSSIATAV EAIKRGACNY LCKPADADDV
LAALLSEHAD LDSLVPENPM SVDRLQWEHI QRVLTEHEGN ISATARALGM HRRTLQRKLQ
KRPVRR
|
|---|
| |