| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Gura_1886 |
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| Symbol | |
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| ID | 5165162 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Geobacter uraniireducens Rf4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009483 |
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| Strand | + |
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| Start bp | 2188167 |
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| End bp | 2189555 |
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| Gene Length | 1389 bp |
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| Protein Length | 462 aa |
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| Translation table | 11 |
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| GC content | 51% |
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| IMG OID | 640549377 |
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| Product | diguanylate cyclase |
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| Protein accession | YP_001230649 |
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| Protein GI | 148263943 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG2199] FOG: GGDEF domain
[COG2204] Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains |
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| TIGRFAM ID | [TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGAGAGGA TTCTTGTAGT TGAAGATGAT AGTTTTTTCA GGGAGGTATT TGCCGATCTC
CTCATCGAAG ACGGTTTCCA TGTCGATGTG GCCGCTTCAG GTGAACAGGC CCTGGTAATG
GTACAAAACC GTGAATACCA GCTTGTGGTG ACCGATCTTG TAATGCCGGA TATCACCGGG
CTTGACATTC TATCCAAGGT CAAGCAGCTC GATCCCACCA TTGATGTCAT TATGGTTACC
GGCCATGCCA ACATGGAAAC GGCGATATTC GCCTTGAAAA ACGGCGCCAG GGATTATCTG
GTCAAGCCGA TAAACCACGA CGAATTCAAG CATGCAGTCG CCTTGTGTTT CGAGCAGCGA
CGGCTTCTCG ACGAAAATCA GGAATTGAAG GGGCTGATAA ATCTCTATCA TGTAAGTCAG
ACCATAGCGA ACTGTCTTGA CCTTGAGCGT ATTCATACGC TGCTCGTCGA TTCGTTGGCC
AAGGAATTCG CCGTAAGCCG GGGGCTTGGA TACTTTCTGG ACGGTGCCGA CAACCTGGAG
TTGAAAGCGC TTAAAGGGGT AAGCGAGGCC AGTGCCGGAC GGCTTGGGGA GTTGATCCTA
TCCAGATACA ACGTGCAGGG GGAAGATTCC CGCAGTTTTG TTCTGCTCCA TGACTTCATG
CAGCCTGATG CGGATTTCGG CTTGGGGACT GACGGAGACA TGAAAGAGGC GATGCTCTTT
TTTGTCCGGT CCAGAACAGT TCTCCAGGGT ATTGTGATTC TTTTCAGTGA ACCGGGGACA
AGTTTTCCGG CGGATATCCA GTTCAAGAAT ATTAATTTCC TGCTCGATCA GTCTTCCTTG
GCGCTGGAAA ATGCGGTTCG CTACAACAAT GCCAAGAATC TCCTCTATAT CGACGAACTT
ACCGGCCTTT TCAATTACCG CTATCTGGAC GTTGCCCTTG AACGCGAGAT CAGGAGGGCC
GAGCGGTACG GCTCCCACAT ATCGGTTATC TTCCTCGATA TCGACCTGTT CAAGCGGGTT
AATGACATGT ATGGACACCT CGTCGGCAGC AGGGCGCTGA ACGAAGTGGG GATACTGCTG
AAAAAGTCGG TGCGCGACGT GGACACGGTT ATTCGATACG GGGGAGATGA GTACACCATT
ATCCTCATCG AAACCGGGAT CGATGGGGCT GCAGCCGTCG CAGAACGTAT CCGCAGATCG
ATTGAAGCGC ACGGTTTTAT GGCGGCAGAC GGCCTGAACC TCAAGCTGAC CGCCAGCCTG
GGATACGCCT GTTATCCTGA AGACGCAAAA ACGAAGACGG AACTCCTGGA GCTGGCTGAT
CAGGCCATGT ATCGCGGTAA GGCCGACGGC AAAAACAGGG TTTTTTATGT TTCCGCGAAA
AATAACTAA
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| Protein sequence | MERILVVEDD SFFREVFADL LIEDGFHVDV AASGEQALVM VQNREYQLVV TDLVMPDITG
LDILSKVKQL DPTIDVIMVT GHANMETAIF ALKNGARDYL VKPINHDEFK HAVALCFEQR
RLLDENQELK GLINLYHVSQ TIANCLDLER IHTLLVDSLA KEFAVSRGLG YFLDGADNLE
LKALKGVSEA SAGRLGELIL SRYNVQGEDS RSFVLLHDFM QPDADFGLGT DGDMKEAMLF
FVRSRTVLQG IVILFSEPGT SFPADIQFKN INFLLDQSSL ALENAVRYNN AKNLLYIDEL
TGLFNYRYLD VALEREIRRA ERYGSHISVI FLDIDLFKRV NDMYGHLVGS RALNEVGILL
KKSVRDVDTV IRYGGDEYTI ILIETGIDGA AAVAERIRRS IEAHGFMAAD GLNLKLTASL
GYACYPEDAK TKTELLELAD QAMYRGKADG KNRVFYVSAK NN
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