Gene Hhal_1419 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHhal_1419 
Symbol 
ID4711077 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHalorhodospira halophila SL1 
KingdomBacteria 
Replicon accessionNC_008789 
Strand- 
Start bp1532190 
End bp1532726 
Gene Length537 bp 
Protein Length178 aa 
Translation table11 
GC content66% 
IMG OID639855886 
Producttwo component Fis family transcriptional regulator 
Protein accessionYP_001002988 
Protein GI121998201 
COG category[K] Transcription
[T] Signal transduction mechanisms 
COG ID[COG4567] Response regulator consisting of a CheY-like receiver domain and a Fis-type HTH domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.104403 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTTGAACG GGCCATCGAT CCTGATCATC GATGACGATA CGACCTTCTC CCAGGTGCTG 
GGGCGCTCGC TCTCGCGCCG GGGCTGCCAC GTGGACTCGG CCGAGGAGCC CGAGACCGCC 
TTGCAGAAAG CGCGCAGTCA GCAGCCGCAG TACGTGGTGC TGGATCTCAA GCTCGGTGAG 
CACTCGGGGC TCAATCTGGT CGAGCCCCTC AAGGATGCAC TCCCGCAGGC CCGCATCCTG 
GTGCTGACCG GATACGCGAG CATCCCCACC GCCGTGGAGG CGATTAAGCG TGGGGCTTAC 
AACTACTTGC CCAAGCCCAC GGATGCCGAC ACCGTGCTCG CGACCCTGGA AGGCAAGCCT 
GCCGCTGAGC CGGAAAAGCC GCCGCAGAAG CCGATGTCGC TGCGCCGCCT CGAGTGGGAG 
CAGATCCAGC GGGTGCTCAA TGAGCACGAC GGCAACATCT CGGCGGCGGC CCGGGCGCTG 
GGGATCCATC GTCGCACCCT GCAGCGCAAA CTGAGCAAAC GGCCGGTCAA GCAGTAG
 
Protein sequence
MLNGPSILII DDDTTFSQVL GRSLSRRGCH VDSAEEPETA LQKARSQQPQ YVVLDLKLGE 
HSGLNLVEPL KDALPQARIL VLTGYASIPT AVEAIKRGAY NYLPKPTDAD TVLATLEGKP 
AAEPEKPPQK PMSLRRLEWE QIQRVLNEHD GNISAAARAL GIHRRTLQRK LSKRPVKQ