| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputW619_4290 |
|---|
| Symbol | |
|---|
| ID | 6113259 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas putida W619 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010501 |
|---|
| Strand | - |
|---|
| Start bp | 4727722 |
|---|
| End bp | 4728285 |
|---|
| Gene Length | 564 bp |
|---|
| Protein Length | 187 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 64% |
|---|
| IMG OID | 641624084 |
|---|
| Product | two component Fis family transcriptional regulator |
|---|
| Protein accession | YP_001751139 |
|---|
| Protein GI | 170723451 |
|---|
| COG category | [K] Transcription
[T] Signal transduction mechanisms |
|---|
| COG ID | [COG4567] Response regulator consisting of a CheY-like receiver domain and a Fis-type HTH domain |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 20 |
|---|
| Plasmid unclonability p-value | 0.566048 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 40 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGATGAGCG AAGAAAACCA GGTCGAAAGC GAAGAGCTGC CGCACCTGCT GCTGGTGGAT
GACGATTCCA CCTTTACGCG GGTCATGGCC CGTGCCATGA GCCGTCGCGG TTTCCGCGTG
AGCACTGCCA GCTCCGCAGA GGAAGGCCTG GTCCTGGCGC AGAACGATCT GCCGGACTAC
GCCACGCTGG ACTTGAAGAT GGAGGGCGAC TCCGGCCTGG TGCTGCTGCC CAAGCTGCTG
GAACTGGACC CGGAAATGCG CGTGGTGATC CTCACCGGCT ACTCAAGCAT TGCCACGGCG
GTCGAGGCGG TCAAGCGCGG GGCGTGCAAC TACCTGTGCA AACCGGCCGA CGCCGATGAT
GTGTTGGCCG CACTGCTCTC GGAGCATACG GACCTGGACA CGCTGGTGCC GGAAAACCCC
ATGTCGGTGG ATCGCTTGCA GTGGGAGCAC ATCCAGCGCG TGCTCAGCGA GCACGAGGGT
AATATCTCCG CTACCGCGCG GGCGCTGGGT ATGCACCGGC GCACGTTGCA GCGCAAGCTG
CAGAAACGGC CTGTGCGGCG CTGA
|
|---|
| Protein sequence | MMSEENQVES EELPHLLLVD DDSTFTRVMA RAMSRRGFRV STASSAEEGL VLAQNDLPDY
ATLDLKMEGD SGLVLLPKLL ELDPEMRVVI LTGYSSIATA VEAVKRGACN YLCKPADADD
VLAALLSEHT DLDTLVPENP MSVDRLQWEH IQRVLSEHEG NISATARALG MHRRTLQRKL
QKRPVRR
|
|---|
| |