More than 300 homologs were found in PanDaTox collection
for query gene Cthe_1867 on replicon NC_009012
Organism: Clostridium thermocellum ATCC 27405



Page 1 of 3    << first  < prev  1  2  3    next >  last >>   


Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_009012  Cthe_1867  carbamoyl-phosphate synthase small subunit  100 
 
 
354 aa  728    Clostridium thermocellum ATCC 27405  Bacteria  normal  n/a   
 
 
-
 
NC_011898  Ccel_2913  carbamoyl-phosphate synthase, small subunit  65.53 
 
 
351 aa  488  1e-137  Clostridium cellulolyticum H10  Bacteria  normal  n/a   
 
 
-
 
NC_012034  Athe_1540  carbamoyl-phosphate synthase, small subunit  55.93 
 
 
356 aa  399  9.999999999999999e-111  Anaerocellum thermophilum DSM 6725  Bacteria  normal  n/a   
 
 
-
 
NC_009253  Dred_1683  carbamoyl-phosphate synthase, small subunit  50.99 
 
 
359 aa  372  1e-102  Desulfotomaculum reducens MI-1  Bacteria  hitchhiker  0.0000104913  n/a   
 
 
-
 
NC_009012  Cthe_0950  carbamoyl-phosphate synthase small subunit  52.26 
 
 
357 aa  369  1e-101  Clostridium thermocellum ATCC 27405  Bacteria  normal  n/a   
 
 
-
 
NC_013385  Adeg_0372  carbamoyl-phosphate synthase, small subunit  47.61 
 
 
359 aa  367  1e-100  Ammonifex degensii KC4  Bacteria  normal  0.386907  n/a   
 
 
-
 
NC_007498  Pcar_1613  carbamoyl phosphate synthase small subunit  48.79 
 
 
376 aa  361  1e-98  Pelobacter carbinolicus DSM 2380  Bacteria  normal  0.0266912  n/a   
 
 
-
 
NC_013216  Dtox_2353  carbamoyl-phosphate synthase, small subunit  49.44 
 
 
358 aa  360  1e-98  Desulfotomaculum acetoxidans DSM 771  Bacteria  decreased coverage  0.00528586  normal 
 
 
-
 
NC_012793  GWCH70_1046  carbamoyl phosphate synthase small subunit  50 
 
 
364 aa  360  2e-98  Geobacillus sp. WCH70  Bacteria  normal  n/a   
 
 
-
 
NC_011899  Hore_02880  carbamoyl-phosphate synthase, small subunit  53.12 
 
 
364 aa  360  2e-98  Halothermothrix orenii H 168  Bacteria  normal  0.422195  n/a   
 
 
-
 
NC_007644  Moth_0881  carbamoyl-phosphate synthase small subunit  49.16 
 
 
361 aa  358  6e-98  Moorella thermoacetica ATCC 39073  Bacteria  normal  normal 
 
 
-
 
NC_013411  GYMC61_1916  carbamoyl phosphate synthase small subunit  49.58 
 
 
364 aa  358  8e-98  Geobacillus sp. Y412MC61  Bacteria  n/a    n/a   
 
 
-
 
NC_004116  SAG1043  carbamoyl phosphate synthase small subunit  49.58 
 
 
358 aa  350  2e-95  Streptococcus agalactiae 2603V/R  Bacteria  normal  n/a   
 
 
-
 
NC_008261  CPF_2898  carbamoyl phosphate synthase small subunit  49.28 
 
 
349 aa  349  3e-95  Clostridium perfringens ATCC 13124  Bacteria  normal  n/a   
 
 
-
 
NC_013517  Sterm_2670  carbamoyl-phosphate synthase, small subunit  48.16 
 
 
351 aa  348  1e-94  Sebaldella termitidis ATCC 33386  Bacteria  normal  n/a   
 
 
-
 
NC_008262  CPR_2577  carbamoyl phosphate synthase small subunit  49.28 
 
 
349 aa  347  1e-94  Clostridium perfringens SM101  Bacteria  normal  n/a   
 
 
-
 
NC_011830  Dhaf_3203  carbamoyl-phosphate synthase, small subunit  49.45 
 
 
368 aa  348  1e-94  Desulfitobacterium hafniense DCB-2  Bacteria  normal  n/a   
 
 
-
 
NC_013205  Aaci_1307  carbamoyl-phosphate synthase, small subunit  47.9 
 
 
368 aa  344  1e-93  Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446  Bacteria  normal  n/a   
 
 
-
 
NC_011725  BCB4264_A3985  carbamoyl phosphate synthase small subunit  48.03 
 
 
365 aa  343  2e-93  Bacillus cereus B4264  Bacteria  normal  0.289727  n/a   
 
 
-
 
NC_003909  BCE_3932  carbamoyl phosphate synthase small subunit  47.75 
 
 
365 aa  342  7e-93  Bacillus cereus ATCC 10987  Bacteria  normal  n/a   
 
 
-
 
NC_011658  BCAH187_A3936  carbamoyl phosphate synthase small subunit  47.75 
 
 
365 aa  342  7e-93  Bacillus cereus AH187  Bacteria  normal  0.0146429  n/a   
 
 
-
 
NC_005945  BAS3738  carbamoyl phosphate synthase small subunit  47.75 
 
 
365 aa  342  8e-93  Bacillus anthracis str. Sterne  Bacteria  normal  n/a   
 
 
-
 
NC_005957  BT9727_3629  carbamoyl phosphate synthase small subunit  47.75 
 
 
365 aa  342  8e-93  Bacillus thuringiensis serovar konkukian str. 97-27  Bacteria  normal  n/a   
 
 
-
 
NC_007530  GBAA_4026  carbamoyl phosphate synthase small subunit  47.75 
 
 
365 aa  342  8e-93  Bacillus anthracis str. 'Ames Ancestor'  Bacteria  normal  0.0667428  n/a   
 
 
-
 
NC_011773  BCAH820_3901  carbamoyl phosphate synthase small subunit  47.75 
 
 
365 aa  342  8e-93  Bacillus cereus AH820  Bacteria  n/a    hitchhiker  0.0000000355158 
 
 
-
 
NC_006274  BCZK3646  carbamoyl phosphate synthase small subunit  47.75 
 
 
365 aa  341  1e-92  Bacillus cereus E33L  Bacteria  normal  n/a   
 
 
-
 
NC_011898  Ccel_0615  carbamoyl-phosphate synthase, small subunit  49.01 
 
 
360 aa  341  1e-92  Clostridium cellulolyticum H10  Bacteria  normal  n/a   
 
 
-
 
NC_011772  BCG9842_B1256  carbamoyl phosphate synthase small subunit  47.47 
 
 
365 aa  340  2.9999999999999998e-92  Bacillus cereus G9842  Bacteria  normal  normal 
 
 
-
 
NC_010424  Daud_1303  carbamoyl-phosphate synthase, small subunit  45.48 
 
 
359 aa  339  4e-92  Candidatus Desulforudis audaxviator MP104C  Bacteria  normal  0.0780078  n/a   
 
 
-
 
NC_010184  BcerKBAB4_3714  carbamoyl phosphate synthase small subunit  47.75 
 
 
365 aa  339  4e-92  Bacillus weihenstephanensis KBAB4  Bacteria  normal  0.971369  n/a   
 
 
-
 
NC_008554  Sfum_0009  carbamoyl phosphate synthase small subunit  46.32 
 
 
391 aa  339  5e-92  Syntrophobacter fumaroxidans MPOB  Bacteria  normal  0.35972  normal 
 
 
-
 
NC_009674  Bcer98_2536  carbamoyl phosphate synthase small subunit  48.31 
 
 
373 aa  338  5.9999999999999996e-92  Bacillus cytotoxicus NVH 391-98  Bacteria  normal  0.0261621  n/a   
 
 
-
 
NC_007519  Dde_3646  carbamoyl phosphate synthase small subunit  45.53 
 
 
375 aa  337  1.9999999999999998e-91  Desulfovibrio desulfuricans subsp. desulfuricans str. G20  Bacteria  normal  n/a   
 
 
-
 
NC_014150  Bmur_2483  carbamoyl-phosphate synthase, small subunit  48.31 
 
 
359 aa  337  1.9999999999999998e-91  Brachyspira murdochii DSM 12563  Bacteria  hitchhiker  0.0000863462  n/a   
 
 
-
 
NC_009943  Dole_0120  carbamoyl-phosphate synthase, small subunit  45.89 
 
 
380 aa  334  1e-90  Desulfococcus oleovorans Hxd3  Bacteria  normal  n/a   
 
 
-
 
NC_008609  Ppro_2527  carbamoyl phosphate synthase small subunit  46.13 
 
 
373 aa  334  1e-90  Pelobacter propionicus DSM 2379  Bacteria  normal  n/a   
 
 
-
 
NC_009483  Gura_1858  carbamoyl phosphate synthase small subunit  45.19 
 
 
373 aa  333  3e-90  Geobacter uraniireducens Rf4  Bacteria  normal  n/a   
 
 
-
 
NC_008527  LACR_1709  carbamoyl phosphate synthase small subunit  44.63 
 
 
357 aa  332  4e-90  Lactococcus lactis subsp. cremoris SK11  Bacteria  normal  n/a   
 
 
-
 
NC_002939  GSU1273  carbamoyl phosphate synthase small subunit  45.19 
 
 
374 aa  332  6e-90  Geobacter sulfurreducens PCA  Bacteria  normal  0.0567002  n/a   
 
 
-
 
NC_014148  Plim_2032  carbamoyl-phosphate synthase, small subunit  44.35 
 
 
383 aa  331  1e-89  Planctomyces limnophilus DSM 3776  Bacteria  unclonable  0.000000277554  n/a   
 
 
-
 
NC_007517  Gmet_1771  carbamoyl phosphate synthase small subunit  45.19 
 
 
374 aa  330  2e-89  Geobacter metallireducens GS-15  Bacteria  normal  0.0224697  normal  0.089739 
 
 
-
 
NC_008532  STER_0558  carbamoyl phosphate synthase small subunit  45.74 
 
 
362 aa  330  2e-89  Streptococcus thermophilus LMD-9  Bacteria  normal  n/a   
 
 
-
 
NC_008751  Dvul_0268  carbamoyl phosphate synthase small subunit  44.44 
 
 
375 aa  329  4e-89  Desulfovibrio vulgaris DP4  Bacteria  normal  normal  0.583908 
 
 
-
 
NC_009675  Anae109_2191  carbamoyl phosphate synthase small subunit  44.02 
 
 
372 aa  327  1.0000000000000001e-88  Anaeromyxobacter sp. Fw109-5  Bacteria  normal  normal  0.352304 
 
 
-
 
NC_012918  GM21_2310  carbamoyl phosphate synthase small subunit  45.45 
 
 
374 aa  328  1.0000000000000001e-88  Geobacter sp. M21  Bacteria  n/a    normal 
 
 
-
 
NC_011769  DvMF_2370  carbamoyl phosphate synthase small subunit  44.05 
 
 
376 aa  327  2.0000000000000001e-88  Desulfovibrio vulgaris str. 'Miyazaki F'  Bacteria  n/a    normal  0.82733 
 
 
-
 
NC_010814  Glov_2083  carbamoyl phosphate synthase small subunit  46.09 
 
 
373 aa  326  4.0000000000000003e-88  Geobacter lovleyi SZ  Bacteria  normal  n/a   
 
 
-
 
NC_011146  Gbem_1898  carbamoyl phosphate synthase small subunit  45.72 
 
 
374 aa  326  4.0000000000000003e-88  Geobacter bemidjiensis Bem  Bacteria  normal  n/a   
 
 
-
 
NC_013223  Dret_1071  carbamoyl-phosphate synthase, small subunit  44.26 
 
 
369 aa  326  4.0000000000000003e-88  Desulfohalobium retbaense DSM 5692  Bacteria  normal  0.0749952  normal  0.228018 
 
 
-
 
NC_008639  Cpha266_2459  carbamoyl phosphate synthase small subunit  44.32 
 
 
369 aa  326  4.0000000000000003e-88  Chlorobium phaeobacteroides DSM 266  Bacteria  normal  0.420642  n/a   
 
 
-
 
NC_010655  Amuc_1250  carbamoyl-phosphate synthase, small subunit  45.73 
 
 
372 aa  325  9e-88  Akkermansia muciniphila ATCC BAA-835  Bacteria  normal  normal 
 
 
-
 
NC_008025  Dgeo_2060  carbamoyl phosphate synthase small subunit  44.74 
 
 
394 aa  325  9e-88  Deinococcus geothermalis DSM 11300  Bacteria  normal  normal  0.745912 
 
 
-
 
NC_011145  AnaeK_2240  carbamoyl phosphate synthase small subunit  42.16 
 
 
373 aa  323  4e-87  Anaeromyxobacter sp. K  Bacteria  normal  0.513182  n/a   
 
 
-
 
NC_011891  A2cp1_2328  carbamoyl phosphate synthase small subunit  41.73 
 
 
373 aa  322  6e-87  Anaeromyxobacter dehalogenans 2CP-1  Bacteria  normal  n/a   
 
 
-
 
NC_010320  Teth514_0661  carbamoyl phosphate synthase small subunit  46.61 
 
 
356 aa  322  6e-87  Thermoanaerobacter sp. X514  Bacteria  normal  n/a   
 
 
-
 
NC_013946  Mrub_2703  carbamoyl-phosphate synthase small subunit  46.32 
 
 
388 aa  321  9.999999999999999e-87  Meiothermus ruber DSM 1279  Bacteria  normal  normal  0.614253 
 
 
-
 
NC_002976  SERP0768  carbamoyl phosphate synthase small subunit  45.92 
 
 
366 aa  320  1.9999999999999998e-86  Staphylococcus epidermidis RP62A  Bacteria  normal  n/a   
 
 
-
 
NC_013173  Dbac_0133  carbamoyl-phosphate synthase, small subunit  45.77 
 
 
378 aa  320  1.9999999999999998e-86  Desulfomicrobium baculatum DSM 4028  Bacteria  normal  n/a   
 
 
-
 
NC_007760  Adeh_1620  carbamoyl phosphate synthase small subunit  42.16 
 
 
373 aa  320  1.9999999999999998e-86  Anaeromyxobacter dehalogenans 2CP-C  Bacteria  normal  0.394714  n/a   
 
 
-
 
NC_008009  Acid345_2194  carbamoyl-phosphate synthase small subunit  41.3 
 
 
373 aa  320  3e-86  Candidatus Koribacter versatilis Ellin345  Bacteria  normal  normal 
 
 
-
 
NC_009635  Maeo_0466  carbamoyl phosphate synthase small subunit  48.17 
 
 
357 aa  319  5e-86  Methanococcus aeolicus Nankai-3  Archaea  normal  n/a   
 
 
-
 
NC_011831  Cagg_2643  carbamoyl-phosphate synthase, small subunit  44.72 
 
 
374 aa  318  7e-86  Chloroflexus aggregans DSM 9485  Bacteria  normal  normal 
 
 
-
 
NC_011060  Ppha_0218  carbamoyl phosphate synthase small subunit  44.97 
 
 
367 aa  317  2e-85  Pelodictyon phaeoclathratiforme BU-1  Bacteria  normal  n/a   
 
 
-
 
NC_011126  HY04AAS1_0951  carbamoyl-phosphate synthase, small subunit  48.16 
 
 
352 aa  316  3e-85  Hydrogenobaculum sp. Y04AAS1  Bacteria  hitchhiker  0.00000000113034  n/a   
 
 
-
 
NC_007512  Plut_0156  carbamoyl phosphate synthase small subunit  43.21 
 
 
369 aa  315  8e-85  Chlorobium luteolum DSM 273  Bacteria  normal  0.983052  normal  0.416855 
 
 
-
 
NC_010803  Clim_2299  carbamoyl phosphate synthase small subunit  44.29 
 
 
369 aa  314  9.999999999999999e-85  Chlorobium limicola DSM 245  Bacteria  hitchhiker  0.0000401664  n/a   
 
 
-
 
NC_009513  Lreu_0086  carbamoyl phosphate synthase small subunit  43.66 
 
 
362 aa  313  2.9999999999999996e-84  Lactobacillus reuteri DSM 20016  Bacteria  hitchhiker  0.000481793  n/a   
 
 
-
 
NC_011661  Dtur_1783  carbamoyl-phosphate synthase, small subunit  44.63 
 
 
358 aa  313  2.9999999999999996e-84  Dictyoglomus turgidum DSM 6724  Bacteria  normal  n/a   
 
 
-
 
NC_009523  RoseRS_4055  carbamoyl-phosphate synthase, small subunit  42.28 
 
 
386 aa  311  1e-83  Roseiflexus sp. RS-1  Bacteria  normal  0.103191  normal 
 
 
-
 
NC_009632  SaurJH1_1286  carbamoyl phosphate synthase small subunit  45.07 
 
 
366 aa  310  2e-83  Staphylococcus aureus subsp. aureus JH1  Bacteria  normal  0.510283  n/a   
 
 
-
 
NC_007516  Syncc9605_1152  carbamoyl phosphate synthase small subunit  43.24 
 
 
386 aa  310  2e-83  Synechococcus sp. CC9605  Bacteria  normal  normal 
 
 
-
 
NC_009487  SaurJH9_1261  carbamoyl phosphate synthase small subunit  45.07 
 
 
366 aa  310  2e-83  Staphylococcus aureus subsp. aureus JH9  Bacteria  normal  n/a   
 
 
-
 
NC_009767  Rcas_3359  carbamoyl-phosphate synthase, small subunit  42.7 
 
 
386 aa  309  5e-83  Roseiflexus castenholzii DSM 13941  Bacteria  normal  0.663891  normal 
 
 
-
 
NC_014212  Mesil_2356  carbamoyl-phosphate synthase, small subunit  43.87 
 
 
388 aa  308  9e-83  Meiothermus silvanus DSM 9946  Bacteria  normal  normal 
 
 
-
 
NC_011884  Cyan7425_1942  carbamoyl phosphate synthase small subunit  43.78 
 
 
389 aa  306  2.0000000000000002e-82  Cyanothece sp. PCC 7425  Bacteria  normal  0.230816  normal  0.202912 
 
 
-
 
NC_011729  PCC7424_3196  carbamoyl phosphate synthase small subunit  43.9 
 
 
379 aa  307  2.0000000000000002e-82  Cyanothece sp. PCC 7424  Bacteria  n/a    normal  0.0368063 
 
 
-
 
NC_010831  Cphamn1_2349  carbamoyl phosphate synthase small subunit  44.54 
 
 
366 aa  306  4.0000000000000004e-82  Chlorobium phaeobacteroides BS1  Bacteria  normal  normal 
 
 
-
 
NC_008530  LGAS_1088  carbamoyl phosphate synthase small subunit  43.38 
 
 
362 aa  306  5.0000000000000004e-82  Lactobacillus gasseri ATCC 33323  Bacteria  normal  normal 
 
 
-
 
NC_010718  Nther_2445  carbamoyl-phosphate synthase, small subunit  43.33 
 
 
399 aa  305  6e-82  Natranaerobius thermophilus JW/NM-WN-LF  Bacteria  normal  normal 
 
 
-
 
NC_008312  Tery_2310  carbamoyl phosphate synthase small subunit  43.67 
 
 
384 aa  305  6e-82  Trichodesmium erythraeum IMS101  Bacteria  normal  normal  0.162276 
 
 
-
 
NC_007604  Synpcc7942_2122  carbamoyl phosphate synthase small subunit  43.9 
 
 
391 aa  303  2.0000000000000002e-81  Synechococcus elongatus PCC 7942  Bacteria  normal  normal  0.618886 
 
 
-
 
NC_007514  Cag_0107  carbamoyl phosphate synthase small subunit  41.94 
 
 
367 aa  303  3.0000000000000004e-81  Chlorobium chlorochromatii CaD3  Bacteria  normal  n/a   
 
 
-
 
NC_008820  P9303_15771  carbamoyl phosphate synthase small subunit  42.09 
 
 
379 aa  303  3.0000000000000004e-81  Prochlorococcus marinus str. MIT 9303  Bacteria  n/a    normal 
 
 
-
 
NC_008817  P9515_10341  carbamoyl phosphate synthase small subunit  44.57 
 
 
379 aa  303  3.0000000000000004e-81  Prochlorococcus marinus str. MIT 9515  Bacteria  normal  n/a   
 
 
-
 
NC_008819  NATL1_09281  carbamoyl phosphate synthase small subunit  44.62 
 
 
384 aa  300  2e-80  Prochlorococcus marinus str. NATL1A  Bacteria  normal  0.87193  normal  0.0301636 
 
 
-
 
NC_007335  PMN2A_0259  carbamoyl phosphate synthase small subunit  44.35 
 
 
384 aa  300  3e-80  Prochlorococcus marinus str. NATL2A  Bacteria  normal  n/a   
 
 
-
 
NC_013510  Tcur_3013  carbamoyl-phosphate synthase, small subunit  43.37 
 
 
377 aa  299  4e-80  Thermomonospora curvata DSM 43183  Bacteria  normal  0.225095  n/a   
 
 
-
 
NC_013161  Cyan8802_0390  carbamoyl phosphate synthase small subunit  43.09 
 
 
380 aa  299  5e-80  Cyanothece sp. PCC 8802  Bacteria  normal  normal 
 
 
-
 
NC_011726  PCC8801_0381  carbamoyl phosphate synthase small subunit  43.09 
 
 
380 aa  299  5e-80  Cyanothece sp. PCC 8801  Bacteria  n/a    n/a   
 
 
-
 
NC_008576  Mmc1_3019  carbamoyl-phosphate synthase small subunit  43.09 
 
 
377 aa  299  5e-80  Magnetococcus sp. MC-1  Bacteria  normal  normal 
 
 
-
 
NC_011059  Paes_2113  carbamoyl phosphate synthase small subunit  42.9 
 
 
371 aa  298  8e-80  Prosthecochloris aestuarii DSM 271  Bacteria  unclonable  0.000000000982338  normal  0.988223 
 
 
-
 
NC_010730  SYO3AOP1_1361  carbamoyl phosphate synthase small subunit  43.58 
 
 
376 aa  298  9e-80  Sulfurihydrogenibium sp. YO3AOP1  Bacteria  normal  n/a   
 
 
-
 
NC_009972  Haur_4242  carbamoyl-phosphate synthase, small subunit  40.86 
 
 
376 aa  297  2e-79  Herpetosiphon aurantiacus ATCC 23779  Bacteria  normal  n/a   
 
 
-
 
NC_008531  LEUM_1208  carbamoyl-phosphate synthase small subunit  42.61 
 
 
361 aa  297  2e-79  Leuconostoc mesenteroides subsp. mesenteroides ATCC 8293  Bacteria  unclonable  0.0000951644  n/a   
 
 
-
 
NC_009455  DehaBAV1_1011  carbamoyl phosphate synthase small subunit  42.3 
 
 
364 aa  296  3e-79  Dehalococcoides sp. BAV1  Bacteria  normal  n/a   
 
 
-
 
NC_002936  DET1201  carbamoyl phosphate synthase small subunit  43.38 
 
 
364 aa  296  5e-79  Dehalococcoides ethenogenes 195  Bacteria  normal  n/a   
 
 
-
 
NC_013552  DhcVS_984  carbamoyl-phosphate synthase, small subunit  43.1 
 
 
364 aa  295  6e-79  Dehalococcoides sp. VS  Bacteria  normal  n/a   
 
 
-
 
NC_014248  Aazo_2282  carbamoyl-phosphate synthase small subunit  42.78 
 
 
385 aa  295  7e-79  'Nostoc azollae' 0708  Bacteria  normal  0.332421  n/a   
 
 
-
 
NC_013174  Jden_1322  carbamoyl-phosphate synthase, small subunit  41.95 
 
 
414 aa  295  8e-79  Jonesia denitrificans DSM 20603  Bacteria  normal  normal  0.125881 
 
 
-
 
NC_013203  Apar_0612  carbamoyl-phosphate synthase, small subunit  39.23 
 
 
417 aa  295  9e-79  Atopobium parvulum DSM 20469  Bacteria  normal  normal  0.348525 
 
 
-
 
Page 1 of 3    << first  < prev  1  2  3    next >  last >>