| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | LGAS_1088 |
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| Symbol | |
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| ID | 4439691 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Lactobacillus gasseri ATCC 33323 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008530 |
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| Strand | - |
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| Start bp | 1096824 |
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| End bp | 1097912 |
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| Gene Length | 1089 bp |
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| Protein Length | 362 aa |
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| Translation table | 11 |
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| GC content | 37% |
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| IMG OID | 639672929 |
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| Product | carbamoyl phosphate synthase small subunit |
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| Protein accession | YP_814899 |
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| Protein GI | 116629727 |
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| COG category | [E] Amino acid transport and metabolism
[F] Nucleotide transport and metabolism |
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| COG ID | [COG0505] Carbamoylphosphate synthase small subunit |
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| TIGRFAM ID | [TIGR01368] carbamoyl-phosphate synthase, small subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 43 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 87 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAACGCT ATTTAATTTT AGAAGATGGC AGTATTTATG AAGGAGAAGG CTTCGGAGCT
GACTGCGAAA GTAGTGGTGA GGTTGTTTTT ACAACAGGAA TGACTGGCTA CCAAGAAGCA
ATTACTGATC AAAGTTATGC TGACCAGATT TTAGTTTTTA CCAATCCCTT AATTGGTAAT
TATGGGATTA CTTTAGCCGA CTATGAATCA CTTGAACCGC AAATTAAGGG TGTAGTATGT
CATCAAGTTG CTCGTCATCC TGATAATTGG AGAATGCAAA CAACTTTGCC AAAATTTTTA
GAAAGATTAA ATATTCCCGG TCTACAAGGA ATTGATACGC GCGAATTGGT TAAAAAGCTT
CGAATTCACG GTACATTAAA AGGAAAGATC ACTGATTCTA AAGAAAATGC TGTTAAGATT
GCTCAAGAAT TAAAAGAAAA AAATATTACT CAAGGTGTGA TTAGCCGCGT TTCAACTAAA
AATTCATATC CAGTCCCAGG ATCTAAACGT AACATTGTTG TAGTTGATTT TGGAATTAAG
CATAGTATTT TACGAGAGTT AGCTGAAAGA GATTGTAATT GCATTGTTTT ACCTTACACT
GCAAGTGCTG ATGAAATTTT AAGTCTTAAT CCAGATGGCG TGCTCTTATC TAATGGACCT
GGAGATCCAG AAGAAATGGT TGAAGCTGCA AAGATGGTTC AAGAAGTTGA AAAACATGTT
CCTTTGTTTG GAATTTGTAT GGGGCACCAA GTTTTTGCGC TTGCTAACGG TGCTAAAACC
TACAAGATGA AATTTGGACA CCGTGGGTTT AACCATCCAG TACGAGAAAT TGCAACTGGA
AATATTGGTT TTACTTCGCA AAATCATGGT TATGCAGTTG ATCCTGCCTC AATTGATAAA
GAAAATCTGA TGATTACGCA TGTTGAAGTA AATGACGGGA CTGTTGAAGG TTTACGCCAT
AAAAAGTATC CAGCATTTTC AGTACAATTC CACCCTGATG CAACACCAGG TCCTCATGAT
GAAGATTCAT TATTTGATGA TTTCATGTCA ATGATTGACC AAAGAAAGGA AGAAGAGCGT
CATGCCTAA
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| Protein sequence | MKRYLILEDG SIYEGEGFGA DCESSGEVVF TTGMTGYQEA ITDQSYADQI LVFTNPLIGN
YGITLADYES LEPQIKGVVC HQVARHPDNW RMQTTLPKFL ERLNIPGLQG IDTRELVKKL
RIHGTLKGKI TDSKENAVKI AQELKEKNIT QGVISRVSTK NSYPVPGSKR NIVVVDFGIK
HSILRELAER DCNCIVLPYT ASADEILSLN PDGVLLSNGP GDPEEMVEAA KMVQEVEKHV
PLFGICMGHQ VFALANGAKT YKMKFGHRGF NHPVREIATG NIGFTSQNHG YAVDPASIDK
ENLMITHVEV NDGTVEGLRH KKYPAFSVQF HPDATPGPHD EDSLFDDFMS MIDQRKEEER
HA
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