More than 300 homologs were found in PanDaTox collection
for query gene LGAS_1088 on replicon NC_008530
Organism: Lactobacillus gasseri ATCC 33323



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_008530  LGAS_1088  carbamoyl phosphate synthase small subunit  100 
 
 
362 aa  754    Lactobacillus gasseri ATCC 33323  Bacteria  normal  normal 
 
 
-
 
NC_009513  Lreu_0086  carbamoyl phosphate synthase small subunit  69.34 
 
 
362 aa  542  1e-153  Lactobacillus reuteri DSM 20016  Bacteria  hitchhiker  0.000481793  n/a   
 
 
-
 
NC_004116  SAG1043  carbamoyl phosphate synthase small subunit  60.06 
 
 
358 aa  459  9.999999999999999e-129  Streptococcus agalactiae 2603V/R  Bacteria  normal  n/a   
 
 
-
 
NC_008527  LACR_1709  carbamoyl phosphate synthase small subunit  58.15 
 
 
357 aa  459  9.999999999999999e-129  Lactococcus lactis subsp. cremoris SK11  Bacteria  normal  n/a   
 
 
-
 
NC_008532  STER_0558  carbamoyl phosphate synthase small subunit  58.54 
 
 
362 aa  457  1e-127  Streptococcus thermophilus LMD-9  Bacteria  normal  n/a   
 
 
-
 
NC_003909  BCE_3932  carbamoyl phosphate synthase small subunit  56.15 
 
 
365 aa  438  9.999999999999999e-123  Bacillus cereus ATCC 10987  Bacteria  normal  n/a   
 
 
-
 
NC_011773  BCAH820_3901  carbamoyl phosphate synthase small subunit  56.42 
 
 
365 aa  439  9.999999999999999e-123  Bacillus cereus AH820  Bacteria  n/a    hitchhiker  0.0000000355158 
 
 
-
 
NC_005945  BAS3738  carbamoyl phosphate synthase small subunit  56.42 
 
 
365 aa  439  9.999999999999999e-123  Bacillus anthracis str. Sterne  Bacteria  normal  n/a   
 
 
-
 
NC_005957  BT9727_3629  carbamoyl phosphate synthase small subunit  56.42 
 
 
365 aa  439  9.999999999999999e-123  Bacillus thuringiensis serovar konkukian str. 97-27  Bacteria  normal  n/a   
 
 
-
 
NC_007530  GBAA_4026  carbamoyl phosphate synthase small subunit  56.42 
 
 
365 aa  439  9.999999999999999e-123  Bacillus anthracis str. 'Ames Ancestor'  Bacteria  normal  0.0667428  n/a   
 
 
-
 
NC_011725  BCB4264_A3985  carbamoyl phosphate synthase small subunit  56.15 
 
 
365 aa  438  9.999999999999999e-123  Bacillus cereus B4264  Bacteria  normal  0.289727  n/a   
 
 
-
 
NC_011658  BCAH187_A3936  carbamoyl phosphate synthase small subunit  56.15 
 
 
365 aa  438  9.999999999999999e-123  Bacillus cereus AH187  Bacteria  normal  0.0146429  n/a   
 
 
-
 
NC_010184  BcerKBAB4_3714  carbamoyl phosphate synthase small subunit  56.15 
 
 
365 aa  436  1e-121  Bacillus weihenstephanensis KBAB4  Bacteria  normal  0.971369  n/a   
 
 
-
 
NC_011772  BCG9842_B1256  carbamoyl phosphate synthase small subunit  55.87 
 
 
365 aa  434  1e-121  Bacillus cereus G9842  Bacteria  normal  normal 
 
 
-
 
NC_006274  BCZK3646  carbamoyl phosphate synthase small subunit  56.15 
 
 
365 aa  437  1e-121  Bacillus cereus E33L  Bacteria  normal  n/a   
 
 
-
 
NC_009674  Bcer98_2536  carbamoyl phosphate synthase small subunit  55.59 
 
 
373 aa  433  1e-120  Bacillus cytotoxicus NVH 391-98  Bacteria  normal  0.0261621  n/a   
 
 
-
 
NC_008531  LEUM_1208  carbamoyl-phosphate synthase small subunit  53.46 
 
 
361 aa  425  1e-118  Leuconostoc mesenteroides subsp. mesenteroides ATCC 8293  Bacteria  unclonable  0.0000951644  n/a   
 
 
-
 
NC_012793  GWCH70_1046  carbamoyl phosphate synthase small subunit  54.19 
 
 
364 aa  418  1e-116  Geobacillus sp. WCH70  Bacteria  normal  n/a   
 
 
-
 
NC_002976  SERP0768  carbamoyl phosphate synthase small subunit  53.33 
 
 
366 aa  417  9.999999999999999e-116  Staphylococcus epidermidis RP62A  Bacteria  normal  n/a   
 
 
-
 
NC_009487  SaurJH9_1261  carbamoyl phosphate synthase small subunit  53.06 
 
 
366 aa  413  1e-114  Staphylococcus aureus subsp. aureus JH9  Bacteria  normal  n/a   
 
 
-
 
NC_009632  SaurJH1_1286  carbamoyl phosphate synthase small subunit  53.06 
 
 
366 aa  413  1e-114  Staphylococcus aureus subsp. aureus JH1  Bacteria  normal  0.510283  n/a   
 
 
-
 
NC_008528  OEOE_0260  carbamoyl-phosphate synthase small subunit  53.09 
 
 
363 aa  408  1e-113  Oenococcus oeni PSU-1  Bacteria  normal  0.734432  n/a   
 
 
-
 
NC_013411  GYMC61_1916  carbamoyl phosphate synthase small subunit  53.3 
 
 
364 aa  410  1e-113  Geobacillus sp. Y412MC61  Bacteria  n/a    n/a   
 
 
-
 
NC_014150  Bmur_2483  carbamoyl-phosphate synthase, small subunit  52.26 
 
 
359 aa  404  1e-111  Brachyspira murdochii DSM 12563  Bacteria  hitchhiker  0.0000863462  n/a   
 
 
-
 
NC_013385  Adeg_0372  carbamoyl-phosphate synthase, small subunit  49.72 
 
 
359 aa  375  1e-103  Ammonifex degensii KC4  Bacteria  normal  0.386907  n/a   
 
 
-
 
NC_009253  Dred_1683  carbamoyl-phosphate synthase, small subunit  47.86 
 
 
359 aa  359  5e-98  Desulfotomaculum reducens MI-1  Bacteria  hitchhiker  0.0000104913  n/a   
 
 
-
 
NC_008262  CPR_2577  carbamoyl phosphate synthase small subunit  49.28 
 
 
349 aa  354  1e-96  Clostridium perfringens SM101  Bacteria  normal  n/a   
 
 
-
 
NC_013216  Dtox_2353  carbamoyl-phosphate synthase, small subunit  48.61 
 
 
358 aa  353  2.9999999999999997e-96  Desulfotomaculum acetoxidans DSM 771  Bacteria  decreased coverage  0.00528586  normal 
 
 
-
 
NC_008261  CPF_2898  carbamoyl phosphate synthase small subunit  49 
 
 
349 aa  352  5e-96  Clostridium perfringens ATCC 13124  Bacteria  normal  n/a   
 
 
-
 
NC_009012  Cthe_0950  carbamoyl-phosphate synthase small subunit  47.89 
 
 
357 aa  352  5.9999999999999994e-96  Clostridium thermocellum ATCC 27405  Bacteria  normal  n/a   
 
 
-
 
NC_010320  Teth514_0661  carbamoyl phosphate synthase small subunit  48.07 
 
 
356 aa  350  2e-95  Thermoanaerobacter sp. X514  Bacteria  normal  n/a   
 
 
-
 
NC_009513  Lreu_0930  carbamoyl phosphate synthase small subunit  48.48 
 
 
361 aa  348  8e-95  Lactobacillus reuteri DSM 20016  Bacteria  normal  n/a   
 
 
-
 
NC_007644  Moth_0881  carbamoyl-phosphate synthase small subunit  45.53 
 
 
361 aa  347  2e-94  Moorella thermoacetica ATCC 39073  Bacteria  normal  normal 
 
 
-
 
NC_011830  Dhaf_3203  carbamoyl-phosphate synthase, small subunit  46.01 
 
 
368 aa  346  4e-94  Desulfitobacterium hafniense DCB-2  Bacteria  normal  n/a   
 
 
-
 
NC_011898  Ccel_0615  carbamoyl-phosphate synthase, small subunit  47.49 
 
 
360 aa  341  9e-93  Clostridium cellulolyticum H10  Bacteria  normal  n/a   
 
 
-
 
NC_010424  Daud_1303  carbamoyl-phosphate synthase, small subunit  46.5 
 
 
359 aa  340  2e-92  Candidatus Desulforudis audaxviator MP104C  Bacteria  normal  0.0780078  n/a   
 
 
-
 
NC_008009  Acid345_2194  carbamoyl-phosphate synthase small subunit  45.01 
 
 
373 aa  340  2e-92  Candidatus Koribacter versatilis Ellin345  Bacteria  normal  normal 
 
 
-
 
NC_013525  Tter_1371  carbamoyl-phosphate synthase, small subunit  47.09 
 
 
368 aa  340  2e-92  Thermobaculum terrenum ATCC BAA-798  Bacteria  n/a    n/a   
 
 
-
 
NC_013205  Aaci_1307  carbamoyl-phosphate synthase, small subunit  45.89 
 
 
368 aa  335  5.999999999999999e-91  Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446  Bacteria  normal  n/a   
 
 
-
 
NC_011898  Ccel_2913  carbamoyl-phosphate synthase, small subunit  44.48 
 
 
351 aa  333  3e-90  Clostridium cellulolyticum H10  Bacteria  normal  n/a   
 
 
-
 
NC_011729  PCC7424_3196  carbamoyl phosphate synthase small subunit  46.26 
 
 
379 aa  330  3e-89  Cyanothece sp. PCC 7424  Bacteria  n/a    normal  0.0368063 
 
 
-
 
NC_008531  LEUM_1371  carbamoyl-phosphate synthase small subunit  44.41 
 
 
359 aa  328  1.0000000000000001e-88  Leuconostoc mesenteroides subsp. mesenteroides ATCC 8293  Bacteria  normal  0.850128  n/a   
 
 
-
 
NC_009455  DehaBAV1_1011  carbamoyl phosphate synthase small subunit  44.6 
 
 
364 aa  326  3e-88  Dehalococcoides sp. BAV1  Bacteria  normal  n/a   
 
 
-
 
NC_002936  DET1201  carbamoyl phosphate synthase small subunit  45.98 
 
 
364 aa  325  7e-88  Dehalococcoides ethenogenes 195  Bacteria  normal  n/a   
 
 
-
 
NC_007498  Pcar_1613  carbamoyl phosphate synthase small subunit  43.35 
 
 
376 aa  325  7e-88  Pelobacter carbinolicus DSM 2380  Bacteria  normal  0.0266912  n/a   
 
 
-
 
NC_011884  Cyan7425_1942  carbamoyl phosphate synthase small subunit  42.89 
 
 
389 aa  324  1e-87  Cyanothece sp. PCC 7425  Bacteria  normal  0.230816  normal  0.202912 
 
 
-
 
NC_012034  Athe_1540  carbamoyl-phosphate synthase, small subunit  44.1 
 
 
356 aa  324  2e-87  Anaerocellum thermophilum DSM 6725  Bacteria  normal  n/a   
 
 
-
 
NC_007514  Cag_0107  carbamoyl phosphate synthase small subunit  46.09 
 
 
367 aa  323  3e-87  Chlorobium chlorochromatii CaD3  Bacteria  normal  n/a   
 
 
-
 
NC_008025  Dgeo_2060  carbamoyl phosphate synthase small subunit  44.26 
 
 
394 aa  323  3e-87  Deinococcus geothermalis DSM 11300  Bacteria  normal  normal  0.745912 
 
 
-
 
NC_010655  Amuc_1250  carbamoyl-phosphate synthase, small subunit  44.32 
 
 
372 aa  323  4e-87  Akkermansia muciniphila ATCC BAA-835  Bacteria  normal  normal 
 
 
-
 
NC_007413  Ava_4410  carbamoyl phosphate synthase small subunit  44.27 
 
 
388 aa  322  5e-87  Anabaena variabilis ATCC 29413  Bacteria  normal  normal  0.924948 
 
 
-
 
NC_013552  DhcVS_984  carbamoyl-phosphate synthase, small subunit  45.98 
 
 
364 aa  322  5e-87  Dehalococcoides sp. VS  Bacteria  normal  n/a   
 
 
-
 
NC_014148  Plim_2032  carbamoyl-phosphate synthase, small subunit  42.29 
 
 
383 aa  321  9.999999999999999e-87  Planctomyces limnophilus DSM 3776  Bacteria  unclonable  0.000000277554  n/a   
 
 
-
 
NC_011899  Hore_02880  carbamoyl-phosphate synthase, small subunit  42.47 
 
 
364 aa  321  9.999999999999999e-87  Halothermothrix orenii H 168  Bacteria  normal  0.422195  n/a   
 
 
-
 
NC_008312  Tery_2310  carbamoyl phosphate synthase small subunit  45.31 
 
 
384 aa  320  1.9999999999999998e-86  Trichodesmium erythraeum IMS101  Bacteria  normal  normal  0.162276 
 
 
-
 
NC_011145  AnaeK_2240  carbamoyl phosphate synthase small subunit  44.32 
 
 
373 aa  319  5e-86  Anaeromyxobacter sp. K  Bacteria  normal  0.513182  n/a   
 
 
-
 
NC_008817  P9515_10341  carbamoyl phosphate synthase small subunit  44.74 
 
 
379 aa  318  7.999999999999999e-86  Prochlorococcus marinus str. MIT 9515  Bacteria  normal  n/a   
 
 
-
 
NC_008639  Cpha266_2459  carbamoyl phosphate synthase small subunit  44.9 
 
 
369 aa  318  9e-86  Chlorobium phaeobacteroides DSM 266  Bacteria  normal  0.420642  n/a   
 
 
-
 
NC_007760  Adeh_1620  carbamoyl phosphate synthase small subunit  44.59 
 
 
373 aa  318  1e-85  Anaeromyxobacter dehalogenans 2CP-C  Bacteria  normal  0.394714  n/a   
 
 
-
 
NC_011891  A2cp1_2328  carbamoyl phosphate synthase small subunit  44.05 
 
 
373 aa  317  2e-85  Anaeromyxobacter dehalogenans 2CP-1  Bacteria  normal  n/a   
 
 
-
 
NC_010483  TRQ2_0379  carbamoyl phosphate synthase small subunit  41.34 
 
 
392 aa  316  4e-85  Thermotoga sp. RQ2  Bacteria  normal  n/a   
 
 
-
 
NC_009486  Tpet_0362  carbamoyl phosphate synthase small subunit  41.34 
 
 
392 aa  316  4e-85  Thermotoga petrophila RKU-1  Bacteria  normal  0.0108123  n/a   
 
 
-
 
NC_014248  Aazo_2282  carbamoyl-phosphate synthase small subunit  42.93 
 
 
385 aa  315  5e-85  'Nostoc azollae' 0708  Bacteria  normal  0.332421  n/a   
 
 
-
 
NC_007512  Plut_0156  carbamoyl phosphate synthase small subunit  44.2 
 
 
369 aa  315  5e-85  Chlorobium luteolum DSM 273  Bacteria  normal  0.983052  normal  0.416855 
 
 
-
 
NC_011059  Paes_2113  carbamoyl phosphate synthase small subunit  44.35 
 
 
371 aa  315  8e-85  Prosthecochloris aestuarii DSM 271  Bacteria  unclonable  0.000000000982338  normal  0.988223 
 
 
-
 
NC_010718  Nther_2445  carbamoyl-phosphate synthase, small subunit  45 
 
 
399 aa  315  9e-85  Natranaerobius thermophilus JW/NM-WN-LF  Bacteria  normal  normal 
 
 
-
 
NC_004116  SAG1363  carbamoyl phosphate synthase small subunit  42.37 
 
 
356 aa  314  9.999999999999999e-85  Streptococcus agalactiae 2603V/R  Bacteria  normal  0.013904  n/a   
 
 
-
 
NC_013517  Sterm_2670  carbamoyl-phosphate synthase, small subunit  44.54 
 
 
351 aa  314  9.999999999999999e-85  Sebaldella termitidis ATCC 33386  Bacteria  normal  n/a   
 
 
-
 
NC_010831  Cphamn1_2349  carbamoyl phosphate synthase small subunit  44.13 
 
 
366 aa  313  2.9999999999999996e-84  Chlorobium phaeobacteroides BS1  Bacteria  normal  normal 
 
 
-
 
NC_010571  Oter_1915  carbamoyl-phosphate synthase, small subunit  42.59 
 
 
390 aa  313  3.9999999999999997e-84  Opitutus terrae PB90-1  Bacteria  normal  normal 
 
 
-
 
NC_011060  Ppha_0218  carbamoyl phosphate synthase small subunit  44.29 
 
 
367 aa  312  4.999999999999999e-84  Pelodictyon phaeoclathratiforme BU-1  Bacteria  normal  n/a   
 
 
-
 
NC_009675  Anae109_2191  carbamoyl phosphate synthase small subunit  43.36 
 
 
372 aa  312  6.999999999999999e-84  Anaeromyxobacter sp. Fw109-5  Bacteria  normal  normal  0.352304 
 
 
-
 
NC_013037  Dfer_4372  carbamoyl phosphate synthase small subunit  45 
 
 
368 aa  311  1e-83  Dyadobacter fermentans DSM 18053  Bacteria  normal  normal 
 
 
-
 
NC_007604  Synpcc7942_2122  carbamoyl phosphate synthase small subunit  43.36 
 
 
391 aa  311  1e-83  Synechococcus elongatus PCC 7942  Bacteria  normal  normal  0.618886 
 
 
-
 
NC_008576  Mmc1_3019  carbamoyl-phosphate synthase small subunit  43.24 
 
 
377 aa  310  2e-83  Magnetococcus sp. MC-1  Bacteria  normal  normal 
 
 
-
 
NC_008819  NATL1_09281  carbamoyl phosphate synthase small subunit  42.47 
 
 
384 aa  310  2e-83  Prochlorococcus marinus str. NATL1A  Bacteria  normal  0.87193  normal  0.0301636 
 
 
-
 
NC_013946  Mrub_2703  carbamoyl-phosphate synthase small subunit  43.96 
 
 
388 aa  310  2.9999999999999997e-83  Meiothermus ruber DSM 1279  Bacteria  normal  normal  0.614253 
 
 
-
 
NC_011726  PCC8801_0381  carbamoyl phosphate synthase small subunit  42.63 
 
 
380 aa  309  5.9999999999999995e-83  Cyanothece sp. PCC 8801  Bacteria  n/a    n/a   
 
 
-
 
NC_013161  Cyan8802_0390  carbamoyl phosphate synthase small subunit  42.63 
 
 
380 aa  309  5.9999999999999995e-83  Cyanothece sp. PCC 8802  Bacteria  normal  normal 
 
 
-
 
NC_007335  PMN2A_0259  carbamoyl phosphate synthase small subunit  42.2 
 
 
384 aa  308  1.0000000000000001e-82  Prochlorococcus marinus str. NATL2A  Bacteria  normal  n/a   
 
 
-
 
NC_008816  A9601_09091  carbamoyl phosphate synthase small subunit  43.94 
 
 
379 aa  308  1.0000000000000001e-82  Prochlorococcus marinus str. AS9601  Bacteria  normal  0.347132  n/a   
 
 
-
 
NC_014212  Mesil_2356  carbamoyl-phosphate synthase, small subunit  44.51 
 
 
388 aa  307  1.0000000000000001e-82  Meiothermus silvanus DSM 9946  Bacteria  normal  normal 
 
 
-
 
NC_009091  P9301_09071  carbamoyl phosphate synthase small subunit  44.5 
 
 
379 aa  306  3e-82  Prochlorococcus marinus str. MIT 9301  Bacteria  normal  n/a   
 
 
-
 
NC_008740  Maqu_3359  carbamoyl-phosphate synthase, small subunit  44.05 
 
 
381 aa  306  5.0000000000000004e-82  Marinobacter aquaeolei VT8  Bacteria  normal  0.365692  n/a   
 
 
-
 
NC_009635  Maeo_0466  carbamoyl phosphate synthase small subunit  42.06 
 
 
357 aa  305  6e-82  Methanococcus aeolicus Nankai-3  Archaea  normal  n/a   
 
 
-
 
NC_007513  Syncc9902_1307  carbamoyl phosphate synthase small subunit  40.32 
 
 
398 aa  303  2.0000000000000002e-81  Synechococcus sp. CC9902  Bacteria  normal  0.786161  n/a   
 
 
-
 
NC_009943  Dole_0120  carbamoyl-phosphate synthase, small subunit  40.32 
 
 
380 aa  303  2.0000000000000002e-81  Desulfococcus oleovorans Hxd3  Bacteria  normal  n/a   
 
 
-
 
NC_008554  Sfum_0009  carbamoyl phosphate synthase small subunit  40.82 
 
 
391 aa  302  5.000000000000001e-81  Syntrophobacter fumaroxidans MPOB  Bacteria  normal  0.35972  normal 
 
 
-
 
NC_008781  Pnap_1774  carbamoyl phosphate synthase small subunit  42.19 
 
 
393 aa  302  6.000000000000001e-81  Polaromonas naphthalenivorans CJ2  Bacteria  normal  normal  0.0283036 
 
 
-
 
NC_010003  Pmob_1699  carbamoyl phosphate synthase small subunit  42.09 
 
 
347 aa  301  8.000000000000001e-81  Petrotoga mobilis SJ95  Bacteria  normal  0.213064  n/a   
 
 
-
 
NC_011126  HY04AAS1_0951  carbamoyl-phosphate synthase, small subunit  44.66 
 
 
352 aa  301  1e-80  Hydrogenobaculum sp. Y04AAS1  Bacteria  hitchhiker  0.00000000113034  n/a   
 
 
-
 
NC_011769  DvMF_2370  carbamoyl phosphate synthase small subunit  40.27 
 
 
376 aa  301  1e-80  Desulfovibrio vulgaris str. 'Miyazaki F'  Bacteria  n/a    normal  0.82733 
 
 
-
 
NC_010717  PXO_00088  carbamoyl phosphate synthase small subunit  43.63 
 
 
390 aa  301  1e-80  Xanthomonas oryzae pv. oryzae PXO99A  Bacteria  normal  0.562291  n/a   
 
 
-
 
NC_013223  Dret_1071  carbamoyl-phosphate synthase, small subunit  40.49 
 
 
369 aa  301  1e-80  Desulfohalobium retbaense DSM 5692  Bacteria  normal  0.0749952  normal  0.228018 
 
 
-
 
NC_008820  P9303_15771  carbamoyl phosphate synthase small subunit  41.24 
 
 
379 aa  300  2e-80  Prochlorococcus marinus str. MIT 9303  Bacteria  n/a    normal 
 
 
-
 
NC_009976  P9211_06931  carbamoyl phosphate synthase small subunit  41.18 
 
 
380 aa  300  2e-80  Prochlorococcus marinus str. MIT 9211  Bacteria  normal  0.0298336  normal  0.187512 
 
 
-
 
NC_007912  Sde_2729  carbamoyl-phosphate synthase small subunit  44.12 
 
 
387 aa  300  2e-80  Saccharophagus degradans 2-40  Bacteria  normal  0.422158  normal 
 
 
-
 
NC_007516  Syncc9605_1152  carbamoyl phosphate synthase small subunit  40.64 
 
 
386 aa  300  3e-80  Synechococcus sp. CC9605  Bacteria  normal  normal 
 
 
-
 
NC_010803  Clim_2299  carbamoyl phosphate synthase small subunit  42.51 
 
 
369 aa  299  6e-80  Chlorobium limicola DSM 245  Bacteria  hitchhiker  0.0000401664  n/a   
 
 
-
 
NC_011071  Smal_1811  carbamoyl phosphate synthase small subunit  42.82 
 
 
393 aa  298  8e-80  Stenotrophomonas maltophilia R551-3  Bacteria  normal  normal  0.0542874 
 
 
-
 
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