More than 300 homologs were found in PanDaTox collection
for query gene LEUM_1371 on replicon NC_008531
Organism: Leuconostoc mesenteroides subsp. mesenteroides ATCC 8293



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_008531  LEUM_1371  carbamoyl-phosphate synthase small subunit  100 
 
 
359 aa  730    Leuconostoc mesenteroides subsp. mesenteroides ATCC 8293  Bacteria  normal  0.850128  n/a   
 
 
-
 
NC_009513  Lreu_0930  carbamoyl phosphate synthase small subunit  54.75 
 
 
361 aa  420  1e-116  Lactobacillus reuteri DSM 20016  Bacteria  normal  n/a   
 
 
-
 
NC_008527  LACR_1709  carbamoyl phosphate synthase small subunit  45.48 
 
 
357 aa  340  2e-92  Lactococcus lactis subsp. cremoris SK11  Bacteria  normal  n/a   
 
 
-
 
NC_005945  BAS3738  carbamoyl phosphate synthase small subunit  44.66 
 
 
365 aa  333  2e-90  Bacillus anthracis str. Sterne  Bacteria  normal  n/a   
 
 
-
 
NC_005957  BT9727_3629  carbamoyl phosphate synthase small subunit  44.66 
 
 
365 aa  333  2e-90  Bacillus thuringiensis serovar konkukian str. 97-27  Bacteria  normal  n/a   
 
 
-
 
NC_011773  BCAH820_3901  carbamoyl phosphate synthase small subunit  44.66 
 
 
365 aa  333  2e-90  Bacillus cereus AH820  Bacteria  n/a    hitchhiker  0.0000000355158 
 
 
-
 
NC_007530  GBAA_4026  carbamoyl phosphate synthase small subunit  44.66 
 
 
365 aa  333  2e-90  Bacillus anthracis str. 'Ames Ancestor'  Bacteria  normal  0.0667428  n/a   
 
 
-
 
NC_004116  SAG1043  carbamoyl phosphate synthase small subunit  44.38 
 
 
358 aa  333  3e-90  Streptococcus agalactiae 2603V/R  Bacteria  normal  n/a   
 
 
-
 
NC_008532  STER_0558  carbamoyl phosphate synthase small subunit  45.2 
 
 
362 aa  333  4e-90  Streptococcus thermophilus LMD-9  Bacteria  normal  n/a   
 
 
-
 
NC_003909  BCE_3932  carbamoyl phosphate synthase small subunit  44.38 
 
 
365 aa  332  5e-90  Bacillus cereus ATCC 10987  Bacteria  normal  n/a   
 
 
-
 
NC_009674  Bcer98_2536  carbamoyl phosphate synthase small subunit  45.22 
 
 
373 aa  332  5e-90  Bacillus cytotoxicus NVH 391-98  Bacteria  normal  0.0261621  n/a   
 
 
-
 
NC_011658  BCAH187_A3936  carbamoyl phosphate synthase small subunit  44.38 
 
 
365 aa  332  5e-90  Bacillus cereus AH187  Bacteria  normal  0.0146429  n/a   
 
 
-
 
NC_011725  BCB4264_A3985  carbamoyl phosphate synthase small subunit  44.38 
 
 
365 aa  332  8e-90  Bacillus cereus B4264  Bacteria  normal  0.289727  n/a   
 
 
-
 
NC_011772  BCG9842_B1256  carbamoyl phosphate synthase small subunit  44.94 
 
 
365 aa  332  8e-90  Bacillus cereus G9842  Bacteria  normal  normal 
 
 
-
 
NC_006274  BCZK3646  carbamoyl phosphate synthase small subunit  44.38 
 
 
365 aa  331  1e-89  Bacillus cereus E33L  Bacteria  normal  n/a   
 
 
-
 
NC_010184  BcerKBAB4_3714  carbamoyl phosphate synthase small subunit  44.66 
 
 
365 aa  328  7e-89  Bacillus weihenstephanensis KBAB4  Bacteria  normal  0.971369  n/a   
 
 
-
 
NC_008530  LGAS_1088  carbamoyl phosphate synthase small subunit  44.41 
 
 
362 aa  328  1.0000000000000001e-88  Lactobacillus gasseri ATCC 33323  Bacteria  normal  normal 
 
 
-
 
NC_012793  GWCH70_1046  carbamoyl phosphate synthase small subunit  44.66 
 
 
364 aa  325  1e-87  Geobacillus sp. WCH70  Bacteria  normal  n/a   
 
 
-
 
NC_009513  Lreu_0086  carbamoyl phosphate synthase small subunit  43.58 
 
 
362 aa  318  1e-85  Lactobacillus reuteri DSM 20016  Bacteria  hitchhiker  0.000481793  n/a   
 
 
-
 
NC_013411  GYMC61_1916  carbamoyl phosphate synthase small subunit  43.82 
 
 
364 aa  311  9e-84  Geobacillus sp. Y412MC61  Bacteria  n/a    n/a   
 
 
-
 
NC_004116  SAG1363  carbamoyl phosphate synthase small subunit  44.44 
 
 
356 aa  307  2.0000000000000002e-82  Streptococcus agalactiae 2603V/R  Bacteria  normal  0.013904  n/a   
 
 
-
 
NC_008528  OEOE_0260  carbamoyl-phosphate synthase small subunit  43.02 
 
 
363 aa  306  4.0000000000000004e-82  Oenococcus oeni PSU-1  Bacteria  normal  0.734432  n/a   
 
 
-
 
NC_014150  Bmur_2483  carbamoyl-phosphate synthase, small subunit  40.39 
 
 
359 aa  295  1e-78  Brachyspira murdochii DSM 12563  Bacteria  hitchhiker  0.0000863462  n/a   
 
 
-
 
NC_002976  SERP0768  carbamoyl phosphate synthase small subunit  41.01 
 
 
366 aa  290  2e-77  Staphylococcus epidermidis RP62A  Bacteria  normal  n/a   
 
 
-
 
NC_008531  LEUM_1208  carbamoyl-phosphate synthase small subunit  41.03 
 
 
361 aa  288  1e-76  Leuconostoc mesenteroides subsp. mesenteroides ATCC 8293  Bacteria  unclonable  0.0000951644  n/a   
 
 
-
 
NC_009632  SaurJH1_1286  carbamoyl phosphate synthase small subunit  40.22 
 
 
366 aa  283  3.0000000000000004e-75  Staphylococcus aureus subsp. aureus JH1  Bacteria  normal  0.510283  n/a   
 
 
-
 
NC_009487  SaurJH9_1261  carbamoyl phosphate synthase small subunit  40.22 
 
 
366 aa  283  3.0000000000000004e-75  Staphylococcus aureus subsp. aureus JH9  Bacteria  normal  n/a   
 
 
-
 
NC_009012  Cthe_0950  carbamoyl-phosphate synthase small subunit  39.38 
 
 
357 aa  280  4e-74  Clostridium thermocellum ATCC 27405  Bacteria  normal  n/a   
 
 
-
 
NC_007644  Moth_0881  carbamoyl-phosphate synthase small subunit  39.27 
 
 
361 aa  271  1e-71  Moorella thermoacetica ATCC 39073  Bacteria  normal  normal 
 
 
-
 
NC_013385  Adeg_0372  carbamoyl-phosphate synthase, small subunit  40.56 
 
 
359 aa  270  2.9999999999999997e-71  Ammonifex degensii KC4  Bacteria  normal  0.386907  n/a   
 
 
-
 
NC_012034  Athe_1540  carbamoyl-phosphate synthase, small subunit  37.07 
 
 
356 aa  268  1e-70  Anaerocellum thermophilum DSM 6725  Bacteria  normal  n/a   
 
 
-
 
NC_003910  CPS_3459  carbamoyl phosphate synthase small subunit  38.62 
 
 
383 aa  267  2e-70  Colwellia psychrerythraea 34H  Bacteria  normal  n/a   
 
 
-
 
NC_011899  Hore_02880  carbamoyl-phosphate synthase, small subunit  38.7 
 
 
364 aa  266  5.999999999999999e-70  Halothermothrix orenii H 168  Bacteria  normal  0.422195  n/a   
 
 
-
 
NC_008009  Acid345_2194  carbamoyl-phosphate synthase small subunit  37.94 
 
 
373 aa  265  8.999999999999999e-70  Candidatus Koribacter versatilis Ellin345  Bacteria  normal  normal 
 
 
-
 
NC_009253  Dred_1683  carbamoyl-phosphate synthase, small subunit  38.33 
 
 
359 aa  265  1e-69  Desulfotomaculum reducens MI-1  Bacteria  hitchhiker  0.0000104913  n/a   
 
 
-
 
NC_008709  Ping_0896  carbamoyl-phosphate synthase, small subunit  38.24 
 
 
378 aa  264  2e-69  Psychromonas ingrahamii 37  Bacteria  normal  0.348294  normal  0.560722 
 
 
-
 
NC_011083  SeHA_C0070  carbamoyl phosphate synthase small subunit  39.04 
 
 
391 aa  263  4e-69  Salmonella enterica subsp. enterica serovar Heidelberg str. SL476  Bacteria  normal  normal 
 
 
-
 
NC_011898  Ccel_0615  carbamoyl-phosphate synthase, small subunit  39.23 
 
 
360 aa  263  4e-69  Clostridium cellulolyticum H10  Bacteria  normal  n/a   
 
 
-
 
NC_011205  SeD_A0072  carbamoyl phosphate synthase small subunit  39.04 
 
 
382 aa  262  4.999999999999999e-69  Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853  Bacteria  normal  0.399436  normal  0.955538 
 
 
-
 
NC_011884  Cyan7425_1942  carbamoyl phosphate synthase small subunit  37.14 
 
 
389 aa  262  6e-69  Cyanothece sp. PCC 7425  Bacteria  normal  0.230816  normal  0.202912 
 
 
-
 
NC_011080  SNSL254_A0070  carbamoyl phosphate synthase small subunit  39.04 
 
 
382 aa  262  6e-69  Salmonella enterica subsp. enterica serovar Newport str. SL254  Bacteria  normal  normal 
 
 
-
 
NC_011149  SeAg_B0073  carbamoyl phosphate synthase small subunit  38.77 
 
 
382 aa  262  8.999999999999999e-69  Salmonella enterica subsp. enterica serovar Agona str. SL483  Bacteria  normal  n/a   
 
 
-
 
NC_011094  SeSA_A0074  carbamoyl phosphate synthase small subunit  38.77 
 
 
382 aa  261  1e-68  Salmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633  Bacteria  normal  normal 
 
 
-
 
NC_010320  Teth514_0661  carbamoyl phosphate synthase small subunit  39.44 
 
 
356 aa  261  1e-68  Thermoanaerobacter sp. X514  Bacteria  normal  n/a   
 
 
-
 
NC_011138  MADE_02244  carbamoyl-phosphate synthase small subunit  36.86 
 
 
440 aa  260  3e-68  Alteromonas macleodii 'Deep ecotype'  Bacteria  normal  0.0231375  n/a   
 
 
-
 
NC_013525  Tter_1371  carbamoyl-phosphate synthase, small subunit  37.64 
 
 
368 aa  259  4e-68  Thermobaculum terrenum ATCC BAA-798  Bacteria  n/a    n/a   
 
 
-
 
NC_012880  Dd703_0592  carbamoyl-phosphate synthase, small subunit  38.4 
 
 
382 aa  259  6e-68  Dickeya dadantii Ech703  Bacteria  normal  n/a   
 
 
-
 
NC_008639  Cpha266_2459  carbamoyl phosphate synthase small subunit  38.7 
 
 
369 aa  259  7e-68  Chlorobium phaeobacteroides DSM 266  Bacteria  normal  0.420642  n/a   
 
 
-
 
NC_011898  Ccel_2913  carbamoyl-phosphate synthase, small subunit  37.71 
 
 
351 aa  258  1e-67  Clostridium cellulolyticum H10  Bacteria  normal  n/a   
 
 
-
 
NC_013216  Dtox_2353  carbamoyl-phosphate synthase, small subunit  36.97 
 
 
358 aa  257  2e-67  Desulfotomaculum acetoxidans DSM 771  Bacteria  decreased coverage  0.00528586  normal 
 
 
-
 
NC_004347  SO_1141  carbamoyl phosphate synthase small subunit  38.4 
 
 
386 aa  257  2e-67  Shewanella oneidensis MR-1  Bacteria  n/a    n/a   
 
 
-
 
NC_010498  EcSMS35_0032  carbamoyl phosphate synthase small subunit  37.9 
 
 
391 aa  257  2e-67  Escherichia coli SMS-3-5  Bacteria  normal  normal 
 
 
-
 
NC_008312  Tery_2310  carbamoyl phosphate synthase small subunit  37.57 
 
 
384 aa  257  2e-67  Trichodesmium erythraeum IMS101  Bacteria  normal  normal  0.162276 
 
 
-
 
NC_010468  EcolC_3623  carbamoyl phosphate synthase small subunit  38.71 
 
 
382 aa  257  3e-67  Escherichia coli ATCC 8739  Bacteria  normal  normal  0.314254 
 
 
-
 
NC_013422  Hneap_1563  carbamoyl-phosphate synthase, small subunit  37.6 
 
 
377 aa  256  4e-67  Halothiobacillus neapolitanus c2  Bacteria  normal  0.878317  n/a   
 
 
-
 
CP001509  ECD_00036  carbamoyl-phosphate synthase small subunit  38.71 
 
 
382 aa  256  5e-67  Escherichia coli BL21(DE3)  Bacteria  normal  0.53844  n/a   
 
 
-
 
CP001637  EcDH1_3567  carbamoyl-phosphate synthase, small subunit  38.71 
 
 
382 aa  256  5e-67  Escherichia coli DH1  Bacteria  normal  n/a   
 
 
-
 
NC_011353  ECH74115_0035  carbamoyl phosphate synthase small subunit  38.71 
 
 
382 aa  256  5e-67  Escherichia coli O157:H7 str. EC4115  Bacteria  normal  normal 
 
 
-
 
NC_009800  EcHS_A0035  carbamoyl phosphate synthase small subunit  38.71 
 
 
382 aa  256  5e-67  Escherichia coli HS  Bacteria  normal  n/a   
 
 
-
 
NC_010658  SbBS512_E0036  carbamoyl phosphate synthase small subunit  38.71 
 
 
382 aa  256  5e-67  Shigella boydii CDC 3083-94  Bacteria  normal  n/a   
 
 
-
 
NC_009801  EcE24377A_0033  carbamoyl phosphate synthase small subunit  38.71 
 
 
382 aa  256  5e-67  Escherichia coli E24377A  Bacteria  normal  n/a   
 
 
-
 
NC_012892  B21_00035  hypothetical protein  38.71 
 
 
382 aa  256  5e-67  Escherichia coli BL21  Bacteria  normal  0.457385  n/a   
 
 
-
 
NC_008228  Patl_2215  carbamoyl-phosphate synthase, small subunit  37 
 
 
381 aa  256  6e-67  Pseudoalteromonas atlantica T6c  Bacteria  hitchhiker  0.000311671  n/a   
 
 
-
 
NC_011761  AFE_0640  carbamoyl-phosphate synthase, small subunit  36.53 
 
 
380 aa  255  8e-67  Acidithiobacillus ferrooxidans ATCC 23270  Bacteria  normal  n/a   
 
 
-
 
NC_011206  Lferr_0790  carbamoyl-phosphate synthase, small subunit  36.53 
 
 
380 aa  255  8e-67  Acidithiobacillus ferrooxidans ATCC 53993  Bacteria  normal  normal 
 
 
-
 
NC_010159  YpAngola_A0784  carbamoyl phosphate synthase small subunit  37.6 
 
 
391 aa  254  1.0000000000000001e-66  Yersinia pestis Angola  Bacteria  normal  0.594963  normal  0.491126 
 
 
-
 
NC_009708  YpsIP31758_3454  carbamoyl phosphate synthase small subunit  37.6 
 
 
391 aa  254  1.0000000000000001e-66  Yersinia pseudotuberculosis IP 31758  Bacteria  normal  n/a   
 
 
-
 
NC_011312  VSAL_I0585  carbamoyl phosphate synthase small subunit  36.6 
 
 
384 aa  254  2.0000000000000002e-66  Aliivibrio salmonicida LFI1238  Bacteria  normal  0.0152244  n/a   
 
 
-
 
NC_011060  Ppha_0218  carbamoyl phosphate synthase small subunit  39.55 
 
 
367 aa  254  2.0000000000000002e-66  Pelodictyon phaeoclathratiforme BU-1  Bacteria  normal  n/a   
 
 
-
 
NC_011729  PCC7424_3196  carbamoyl phosphate synthase small subunit  37.9 
 
 
379 aa  254  2.0000000000000002e-66  Cyanothece sp. PCC 7424  Bacteria  n/a    normal  0.0368063 
 
 
-
 
NC_008261  CPF_2898  carbamoyl phosphate synthase small subunit  37.43 
 
 
349 aa  254  2.0000000000000002e-66  Clostridium perfringens ATCC 13124  Bacteria  normal  n/a   
 
 
-
 
NC_008262  CPR_2577  carbamoyl phosphate synthase small subunit  37.43 
 
 
349 aa  254  2.0000000000000002e-66  Clostridium perfringens SM101  Bacteria  normal  n/a   
 
 
-
 
NC_007520  Tcr_0878  carbamoyl-phosphate synthase, small subunit  37.47 
 
 
378 aa  253  3e-66  Thiomicrospira crunogena XCL-2  Bacteria  normal  n/a   
 
 
-
 
NC_010465  YPK_3583  carbamoyl phosphate synthase small subunit  37.33 
 
 
391 aa  253  4.0000000000000004e-66  Yersinia pseudotuberculosis YPIII  Bacteria  normal  n/a   
 
 
-
 
NC_008781  Pnap_1774  carbamoyl phosphate synthase small subunit  38.16 
 
 
393 aa  253  4.0000000000000004e-66  Polaromonas naphthalenivorans CJ2  Bacteria  normal  normal  0.0283036 
 
 
-
 
NC_009092  Shew_2839  carbamoyl phosphate synthase small subunit  39.08 
 
 
390 aa  253  4.0000000000000004e-66  Shewanella loihica PV-4  Bacteria  hitchhiker  0.00340084  normal  0.0286195 
 
 
-
 
NC_008321  Shewmr4_0965  carbamoyl phosphate synthase small subunit  37.83 
 
 
386 aa  253  5.000000000000001e-66  Shewanella sp. MR-4  Bacteria  normal  0.0738044  normal 
 
 
-
 
NC_009457  VC0395_A1968  carbamoyl phosphate synthase small subunit  37.43 
 
 
379 aa  252  7e-66  Vibrio cholerae O395  Bacteria  normal  0.837999  n/a   
 
 
-
 
NC_007604  Synpcc7942_2122  carbamoyl phosphate synthase small subunit  38.96 
 
 
391 aa  252  8.000000000000001e-66  Synechococcus elongatus PCC 7942  Bacteria  normal  normal  0.618886 
 
 
-
 
NC_007947  Mfla_0778  carbamoyl-phosphate synthase small subunit  38.02 
 
 
376 aa  251  9.000000000000001e-66  Methylobacillus flagellatus KT  Bacteria  normal  0.42563  hitchhiker  0.000147727 
 
 
-
 
NC_008345  Sfri_0975  carbamoyl phosphate synthase small subunit  37.57 
 
 
381 aa  252  9.000000000000001e-66  Shewanella frigidimarina NCIMB 400  Bacteria  hitchhiker  0.00141878  n/a   
 
 
-
 
NC_008577  Shewana3_0967  carbamoyl phosphate synthase small subunit  37.83 
 
 
386 aa  252  9.000000000000001e-66  Shewanella sp. ANA-3  Bacteria  hitchhiker  0.00370508  normal 
 
 
-
 
NC_009831  Ssed_3404  carbamoyl phosphate synthase small subunit  38.56 
 
 
385 aa  251  1e-65  Shewanella sediminis HAW-EB3  Bacteria  normal  hitchhiker  0.0000786314 
 
 
-
 
NC_009438  Sputcn32_2940  carbamoyl phosphate synthase small subunit  37.93 
 
 
386 aa  251  1e-65  Shewanella putrefaciens CN-32  Bacteria  normal  0.185194  n/a   
 
 
-
 
NC_013205  Aaci_1307  carbamoyl-phosphate synthase, small subunit  38.79 
 
 
368 aa  251  1e-65  Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446  Bacteria  normal  n/a   
 
 
-
 
NC_008740  Maqu_3359  carbamoyl-phosphate synthase, small subunit  36.78 
 
 
381 aa  251  1e-65  Marinobacter aquaeolei VT8  Bacteria  normal  0.365692  n/a   
 
 
-
 
NC_013889  TK90_0698  carbamoyl-phosphate synthase, small subunit  39.45 
 
 
377 aa  251  1e-65  Thioalkalivibrio sp. K90mix  Bacteria  normal  normal  0.110228 
 
 
-
 
NC_009832  Spro_0713  carbamoyl phosphate synthase small subunit  38.98 
 
 
382 aa  251  1e-65  Serratia proteamaculans 568  Bacteria  normal  normal  0.123455 
 
 
-
 
NC_008322  Shewmr7_1003  carbamoyl phosphate synthase small subunit  37.57 
 
 
386 aa  251  1e-65  Shewanella sp. MR-7  Bacteria  normal  0.0354323  normal 
 
 
-
 
NC_010506  Swoo_3578  carbamoyl phosphate synthase small subunit  38.77 
 
 
381 aa  251  1e-65  Shewanella woodyi ATCC 51908  Bacteria  normal  0.0674639  normal  0.11278 
 
 
-
 
NC_009997  Sbal195_3526  carbamoyl phosphate synthase small subunit  37.47 
 
 
386 aa  250  2e-65  Shewanella baltica OS195  Bacteria  normal  normal 
 
 
-
 
NC_009783  VIBHAR_00912  carbamoyl phosphate synthase small subunit  36.6 
 
 
416 aa  251  2e-65  Vibrio harveyi ATCC BAA-1116  Bacteria  n/a    n/a   
 
 
-
 
NC_009654  Mmwyl1_4035  carbamoyl phosphate synthase small subunit  37.06 
 
 
396 aa  250  3e-65  Marinomonas sp. MWYL1  Bacteria  normal  0.311643  normal 
 
 
-
 
NC_007298  Daro_0938  carbamoyl-phosphate synthase small subunit  38.74 
 
 
385 aa  249  4e-65  Dechloromonas aromatica RCB  Bacteria  normal  0.742428  normal 
 
 
-
 
NC_011663  Sbal223_1051  carbamoyl phosphate synthase small subunit  37.77 
 
 
387 aa  249  4e-65  Shewanella baltica OS223  Bacteria  normal  0.098868  hitchhiker  0.0000017806 
 
 
-
 
NC_012917  PC1_3648  carbamoyl phosphate synthase small subunit  37.37 
 
 
382 aa  249  4e-65  Pectobacterium carotovorum subsp. carotovorum PC1  Bacteria  normal  0.48497  n/a   
 
 
-
 
NC_009436  Ent638_0591  carbamoyl phosphate synthase small subunit  38.17 
 
 
382 aa  249  4e-65  Enterobacter sp. 638  Bacteria  normal  normal 
 
 
-
 
NC_008700  Sama_2504  carbamoyl phosphate synthase small subunit  37.74 
 
 
381 aa  249  4e-65  Shewanella amazonensis SB2B  Bacteria  normal  0.323519  normal 
 
 
-
 
NC_009665  Shew185_3401  carbamoyl phosphate synthase small subunit  37.77 
 
 
391 aa  249  5e-65  Shewanella baltica OS185  Bacteria  hitchhiker  0.00720177  n/a   
 
 
-
 
NC_009052  Sbal_3305  carbamoyl phosphate synthase small subunit  37.2 
 
 
386 aa  248  8e-65  Shewanella baltica OS155  Bacteria  normal  0.314757  n/a   
 
 
-
 
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