More than 300 homologs were found in PanDaTox collection
for query gene STER_0558 on replicon NC_008532
Organism: Streptococcus thermophilus LMD-9



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_008532  STER_0558  carbamoyl phosphate synthase small subunit  100 
 
 
362 aa  754    Streptococcus thermophilus LMD-9  Bacteria  normal  n/a   
 
 
-
 
NC_008527  LACR_1709  carbamoyl phosphate synthase small subunit  74.72 
 
 
357 aa  590  1e-168  Lactococcus lactis subsp. cremoris SK11  Bacteria  normal  n/a   
 
 
-
 
NC_004116  SAG1043  carbamoyl phosphate synthase small subunit  74.51 
 
 
358 aa  576  1.0000000000000001e-163  Streptococcus agalactiae 2603V/R  Bacteria  normal  n/a   
 
 
-
 
NC_009674  Bcer98_2536  carbamoyl phosphate synthase small subunit  57.7 
 
 
373 aa  457  9.999999999999999e-129  Bacillus cytotoxicus NVH 391-98  Bacteria  normal  0.0261621  n/a   
 
 
-
 
NC_012793  GWCH70_1046  carbamoyl phosphate synthase small subunit  58.54 
 
 
364 aa  458  9.999999999999999e-129  Geobacillus sp. WCH70  Bacteria  normal  n/a   
 
 
-
 
NC_011772  BCG9842_B1256  carbamoyl phosphate synthase small subunit  57.14 
 
 
365 aa  457  1e-127  Bacillus cereus G9842  Bacteria  normal  normal 
 
 
-
 
NC_003909  BCE_3932  carbamoyl phosphate synthase small subunit  56.86 
 
 
365 aa  455  1e-127  Bacillus cereus ATCC 10987  Bacteria  normal  n/a   
 
 
-
 
NC_011658  BCAH187_A3936  carbamoyl phosphate synthase small subunit  56.86 
 
 
365 aa  455  1e-127  Bacillus cereus AH187  Bacteria  normal  0.0146429  n/a   
 
 
-
 
NC_005945  BAS3738  carbamoyl phosphate synthase small subunit  57.14 
 
 
365 aa  456  1e-127  Bacillus anthracis str. Sterne  Bacteria  normal  n/a   
 
 
-
 
NC_005957  BT9727_3629  carbamoyl phosphate synthase small subunit  57.14 
 
 
365 aa  456  1e-127  Bacillus thuringiensis serovar konkukian str. 97-27  Bacteria  normal  n/a   
 
 
-
 
NC_011725  BCB4264_A3985  carbamoyl phosphate synthase small subunit  56.86 
 
 
365 aa  455  1e-127  Bacillus cereus B4264  Bacteria  normal  0.289727  n/a   
 
 
-
 
NC_013411  GYMC61_1916  carbamoyl phosphate synthase small subunit  59.1 
 
 
364 aa  454  1e-127  Geobacillus sp. Y412MC61  Bacteria  n/a    n/a   
 
 
-
 
NC_007530  GBAA_4026  carbamoyl phosphate synthase small subunit  57.14 
 
 
365 aa  456  1e-127  Bacillus anthracis str. 'Ames Ancestor'  Bacteria  normal  0.0667428  n/a   
 
 
-
 
NC_011773  BCAH820_3901  carbamoyl phosphate synthase small subunit  57.14 
 
 
365 aa  456  1e-127  Bacillus cereus AH820  Bacteria  n/a    hitchhiker  0.0000000355158 
 
 
-
 
NC_008530  LGAS_1088  carbamoyl phosphate synthase small subunit  58.54 
 
 
362 aa  457  1e-127  Lactobacillus gasseri ATCC 33323  Bacteria  normal  normal 
 
 
-
 
NC_006274  BCZK3646  carbamoyl phosphate synthase small subunit  56.86 
 
 
365 aa  454  1.0000000000000001e-126  Bacillus cereus E33L  Bacteria  normal  n/a   
 
 
-
 
NC_010184  BcerKBAB4_3714  carbamoyl phosphate synthase small subunit  56.86 
 
 
365 aa  452  1.0000000000000001e-126  Bacillus weihenstephanensis KBAB4  Bacteria  normal  0.971369  n/a   
 
 
-
 
NC_008531  LEUM_1208  carbamoyl-phosphate synthase small subunit  58.64 
 
 
361 aa  451  1.0000000000000001e-126  Leuconostoc mesenteroides subsp. mesenteroides ATCC 8293  Bacteria  unclonable  0.0000951644  n/a   
 
 
-
 
NC_002976  SERP0768  carbamoyl phosphate synthase small subunit  57.94 
 
 
366 aa  451  1e-125  Staphylococcus epidermidis RP62A  Bacteria  normal  n/a   
 
 
-
 
NC_004116  SAG1363  carbamoyl phosphate synthase small subunit  57.06 
 
 
356 aa  439  9.999999999999999e-123  Streptococcus agalactiae 2603V/R  Bacteria  normal  0.013904  n/a   
 
 
-
 
NC_009632  SaurJH1_1286  carbamoyl phosphate synthase small subunit  57.54 
 
 
366 aa  439  9.999999999999999e-123  Staphylococcus aureus subsp. aureus JH1  Bacteria  normal  0.510283  n/a   
 
 
-
 
NC_009487  SaurJH9_1261  carbamoyl phosphate synthase small subunit  57.54 
 
 
366 aa  439  9.999999999999999e-123  Staphylococcus aureus subsp. aureus JH9  Bacteria  normal  n/a   
 
 
-
 
NC_008528  OEOE_0260  carbamoyl-phosphate synthase small subunit  54.35 
 
 
363 aa  433  1e-120  Oenococcus oeni PSU-1  Bacteria  normal  0.734432  n/a   
 
 
-
 
NC_009513  Lreu_0086  carbamoyl phosphate synthase small subunit  53.26 
 
 
362 aa  413  1e-114  Lactobacillus reuteri DSM 20016  Bacteria  hitchhiker  0.000481793  n/a   
 
 
-
 
NC_014150  Bmur_2483  carbamoyl-phosphate synthase, small subunit  52.84 
 
 
359 aa  409  1e-113  Brachyspira murdochii DSM 12563  Bacteria  hitchhiker  0.0000863462  n/a   
 
 
-
 
NC_009253  Dred_1683  carbamoyl-phosphate synthase, small subunit  51.97 
 
 
359 aa  394  1e-109  Desulfotomaculum reducens MI-1  Bacteria  hitchhiker  0.0000104913  n/a   
 
 
-
 
NC_008261  CPF_2898  carbamoyl phosphate synthase small subunit  50.86 
 
 
349 aa  378  1e-104  Clostridium perfringens ATCC 13124  Bacteria  normal  n/a   
 
 
-
 
NC_008262  CPR_2577  carbamoyl phosphate synthase small subunit  50.86 
 
 
349 aa  378  1e-104  Clostridium perfringens SM101  Bacteria  normal  n/a   
 
 
-
 
NC_013385  Adeg_0372  carbamoyl-phosphate synthase, small subunit  49.15 
 
 
359 aa  374  1e-103  Ammonifex degensii KC4  Bacteria  normal  0.386907  n/a   
 
 
-
 
NC_009012  Cthe_0950  carbamoyl-phosphate synthase small subunit  50.42 
 
 
357 aa  375  1e-103  Clostridium thermocellum ATCC 27405  Bacteria  normal  n/a   
 
 
-
 
NC_007644  Moth_0881  carbamoyl-phosphate synthase small subunit  47.77 
 
 
361 aa  369  1e-101  Moorella thermoacetica ATCC 39073  Bacteria  normal  normal 
 
 
-
 
NC_013216  Dtox_2353  carbamoyl-phosphate synthase, small subunit  49.43 
 
 
358 aa  370  1e-101  Desulfotomaculum acetoxidans DSM 771  Bacteria  decreased coverage  0.00528586  normal 
 
 
-
 
NC_011898  Ccel_0615  carbamoyl-phosphate synthase, small subunit  51.13 
 
 
360 aa  366  1e-100  Clostridium cellulolyticum H10  Bacteria  normal  n/a   
 
 
-
 
NC_013205  Aaci_1307  carbamoyl-phosphate synthase, small subunit  51.72 
 
 
368 aa  368  1e-100  Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446  Bacteria  normal  n/a   
 
 
-
 
NC_011898  Ccel_2913  carbamoyl-phosphate synthase, small subunit  47.58 
 
 
351 aa  355  5.999999999999999e-97  Clostridium cellulolyticum H10  Bacteria  normal  n/a   
 
 
-
 
NC_009513  Lreu_0930  carbamoyl phosphate synthase small subunit  48.74 
 
 
361 aa  355  5.999999999999999e-97  Lactobacillus reuteri DSM 20016  Bacteria  normal  n/a   
 
 
-
 
NC_011830  Dhaf_3203  carbamoyl-phosphate synthase, small subunit  45.73 
 
 
368 aa  354  1e-96  Desulfitobacterium hafniense DCB-2  Bacteria  normal  n/a   
 
 
-
 
NC_014148  Plim_2032  carbamoyl-phosphate synthase, small subunit  47.67 
 
 
383 aa  349  4e-95  Planctomyces limnophilus DSM 3776  Bacteria  unclonable  0.000000277554  n/a   
 
 
-
 
NC_010424  Daud_1303  carbamoyl-phosphate synthase, small subunit  47.59 
 
 
359 aa  348  8e-95  Candidatus Desulforudis audaxviator MP104C  Bacteria  normal  0.0780078  n/a   
 
 
-
 
NC_012034  Athe_1540  carbamoyl-phosphate synthase, small subunit  46.91 
 
 
356 aa  348  1e-94  Anaerocellum thermophilum DSM 6725  Bacteria  normal  n/a   
 
 
-
 
NC_008576  Mmc1_3019  carbamoyl-phosphate synthase small subunit  46.49 
 
 
377 aa  345  8.999999999999999e-94  Magnetococcus sp. MC-1  Bacteria  normal  normal 
 
 
-
 
NC_008639  Cpha266_2459  carbamoyl phosphate synthase small subunit  46.98 
 
 
369 aa  343  2.9999999999999997e-93  Chlorobium phaeobacteroides DSM 266  Bacteria  normal  0.420642  n/a   
 
 
-
 
NC_013525  Tter_1371  carbamoyl-phosphate synthase, small subunit  47.08 
 
 
368 aa  342  5e-93  Thermobaculum terrenum ATCC BAA-798  Bacteria  n/a    n/a   
 
 
-
 
NC_007498  Pcar_1613  carbamoyl phosphate synthase small subunit  45.92 
 
 
376 aa  342  7e-93  Pelobacter carbinolicus DSM 2380  Bacteria  normal  0.0266912  n/a   
 
 
-
 
NC_010831  Cphamn1_2349  carbamoyl phosphate synthase small subunit  46.52 
 
 
366 aa  336  2.9999999999999997e-91  Chlorobium phaeobacteroides BS1  Bacteria  normal  normal 
 
 
-
 
NC_010718  Nther_2445  carbamoyl-phosphate synthase, small subunit  45.4 
 
 
399 aa  337  2.9999999999999997e-91  Natranaerobius thermophilus JW/NM-WN-LF  Bacteria  normal  normal 
 
 
-
 
NC_008554  Sfum_0009  carbamoyl phosphate synthase small subunit  44.59 
 
 
391 aa  335  5e-91  Syntrophobacter fumaroxidans MPOB  Bacteria  normal  0.35972  normal 
 
 
-
 
NC_011899  Hore_02880  carbamoyl-phosphate synthase, small subunit  45.95 
 
 
364 aa  335  5.999999999999999e-91  Halothermothrix orenii H 168  Bacteria  normal  0.422195  n/a   
 
 
-
 
NC_010655  Amuc_1250  carbamoyl-phosphate synthase, small subunit  44.92 
 
 
372 aa  333  2e-90  Akkermansia muciniphila ATCC BAA-835  Bacteria  normal  normal 
 
 
-
 
NC_007514  Cag_0107  carbamoyl phosphate synthase small subunit  45.71 
 
 
367 aa  333  2e-90  Chlorobium chlorochromatii CaD3  Bacteria  normal  n/a   
 
 
-
 
NC_008531  LEUM_1371  carbamoyl-phosphate synthase small subunit  45.2 
 
 
359 aa  333  4e-90  Leuconostoc mesenteroides subsp. mesenteroides ATCC 8293  Bacteria  normal  0.850128  n/a   
 
 
-
 
NC_007512  Plut_0156  carbamoyl phosphate synthase small subunit  44.6 
 
 
369 aa  330  3e-89  Chlorobium luteolum DSM 273  Bacteria  normal  0.983052  normal  0.416855 
 
 
-
 
NC_011729  PCC7424_3196  carbamoyl phosphate synthase small subunit  44.86 
 
 
379 aa  330  3e-89  Cyanothece sp. PCC 7424  Bacteria  n/a    normal  0.0368063 
 
 
-
 
NC_009438  Sputcn32_2940  carbamoyl phosphate synthase small subunit  46.17 
 
 
386 aa  330  3e-89  Shewanella putrefaciens CN-32  Bacteria  normal  0.185194  n/a   
 
 
-
 
NC_008009  Acid345_2194  carbamoyl-phosphate synthase small subunit  43.28 
 
 
373 aa  329  4e-89  Candidatus Koribacter versatilis Ellin345  Bacteria  normal  normal 
 
 
-
 
NC_013517  Sterm_2670  carbamoyl-phosphate synthase, small subunit  43.71 
 
 
351 aa  329  5.0000000000000004e-89  Sebaldella termitidis ATCC 33386  Bacteria  normal  n/a   
 
 
-
 
NC_014248  Aazo_2282  carbamoyl-phosphate synthase small subunit  45.69 
 
 
385 aa  329  5.0000000000000004e-89  'Nostoc azollae' 0708  Bacteria  normal  0.332421  n/a   
 
 
-
 
NC_009457  VC0395_A1968  carbamoyl phosphate synthase small subunit  45.6 
 
 
379 aa  328  6e-89  Vibrio cholerae O395  Bacteria  normal  0.837999  n/a   
 
 
-
 
NC_008321  Shewmr4_0965  carbamoyl phosphate synthase small subunit  46.17 
 
 
386 aa  328  6e-89  Shewanella sp. MR-4  Bacteria  normal  0.0738044  normal 
 
 
-
 
NC_009635  Maeo_0466  carbamoyl phosphate synthase small subunit  44.29 
 
 
357 aa  328  8e-89  Methanococcus aeolicus Nankai-3  Archaea  normal  n/a   
 
 
-
 
NC_011884  Cyan7425_1942  carbamoyl phosphate synthase small subunit  43.8 
 
 
389 aa  328  1.0000000000000001e-88  Cyanothece sp. PCC 7425  Bacteria  normal  0.230816  normal  0.202912 
 
 
-
 
NC_009052  Sbal_3305  carbamoyl phosphate synthase small subunit  45.91 
 
 
386 aa  327  2.0000000000000001e-88  Shewanella baltica OS155  Bacteria  normal  0.314757  n/a   
 
 
-
 
NC_011145  AnaeK_2240  carbamoyl phosphate synthase small subunit  44.5 
 
 
373 aa  327  2.0000000000000001e-88  Anaeromyxobacter sp. K  Bacteria  normal  0.513182  n/a   
 
 
-
 
NC_007604  Synpcc7942_2122  carbamoyl phosphate synthase small subunit  45.75 
 
 
391 aa  327  2.0000000000000001e-88  Synechococcus elongatus PCC 7942  Bacteria  normal  normal  0.618886 
 
 
-
 
NC_013552  DhcVS_984  carbamoyl-phosphate synthase, small subunit  46.46 
 
 
364 aa  327  2.0000000000000001e-88  Dehalococcoides sp. VS  Bacteria  normal  n/a   
 
 
-
 
NC_008322  Shewmr7_1003  carbamoyl phosphate synthase small subunit  45.91 
 
 
386 aa  327  2.0000000000000001e-88  Shewanella sp. MR-7  Bacteria  normal  0.0354323  normal 
 
 
-
 
NC_011831  Cagg_2643  carbamoyl-phosphate synthase, small subunit  44.84 
 
 
374 aa  327  2.0000000000000001e-88  Chloroflexus aggregans DSM 9485  Bacteria  normal  normal 
 
 
-
 
NC_009675  Anae109_2191  carbamoyl phosphate synthase small subunit  45.16 
 
 
372 aa  326  3e-88  Anaeromyxobacter sp. Fw109-5  Bacteria  normal  normal  0.352304 
 
 
-
 
NC_011891  A2cp1_2328  carbamoyl phosphate synthase small subunit  44.5 
 
 
373 aa  327  3e-88  Anaeromyxobacter dehalogenans 2CP-1  Bacteria  normal  n/a   
 
 
-
 
NC_002936  DET1201  carbamoyl phosphate synthase small subunit  46.18 
 
 
364 aa  326  4.0000000000000003e-88  Dehalococcoides ethenogenes 195  Bacteria  normal  n/a   
 
 
-
 
NC_009831  Ssed_3404  carbamoyl phosphate synthase small subunit  45.33 
 
 
385 aa  326  4.0000000000000003e-88  Shewanella sediminis HAW-EB3  Bacteria  normal  hitchhiker  0.0000786314 
 
 
-
 
NC_010320  Teth514_0661  carbamoyl phosphate synthase small subunit  42.98 
 
 
356 aa  326  4.0000000000000003e-88  Thermoanaerobacter sp. X514  Bacteria  normal  n/a   
 
 
-
 
NC_004347  SO_1141  carbamoyl phosphate synthase small subunit  45.65 
 
 
386 aa  326  5e-88  Shewanella oneidensis MR-1  Bacteria  n/a    n/a   
 
 
-
 
NC_007413  Ava_4410  carbamoyl phosphate synthase small subunit  45.08 
 
 
388 aa  325  5e-88  Anabaena variabilis ATCC 29413  Bacteria  normal  normal  0.924948 
 
 
-
 
NC_011059  Paes_2113  carbamoyl phosphate synthase small subunit  44.17 
 
 
371 aa  325  6e-88  Prosthecochloris aestuarii DSM 271  Bacteria  unclonable  0.000000000982338  normal  0.988223 
 
 
-
 
NC_003910  CPS_3459  carbamoyl phosphate synthase small subunit  45.77 
 
 
383 aa  325  6e-88  Colwellia psychrerythraea 34H  Bacteria  normal  n/a   
 
 
-
 
NC_008577  Shewana3_0967  carbamoyl phosphate synthase small subunit  45.65 
 
 
386 aa  325  9e-88  Shewanella sp. ANA-3  Bacteria  hitchhiker  0.00370508  normal 
 
 
-
 
NC_010803  Clim_2299  carbamoyl phosphate synthase small subunit  44.81 
 
 
369 aa  324  1e-87  Chlorobium limicola DSM 245  Bacteria  hitchhiker  0.0000401664  n/a   
 
 
-
 
NC_009767  Rcas_3359  carbamoyl-phosphate synthase, small subunit  46.56 
 
 
386 aa  323  2e-87  Roseiflexus castenholzii DSM 13941  Bacteria  normal  0.663891  normal 
 
 
-
 
NC_009012  Cthe_1867  carbamoyl-phosphate synthase small subunit  45.74 
 
 
354 aa  323  2e-87  Clostridium thermocellum ATCC 27405  Bacteria  normal  n/a   
 
 
-
 
NC_008312  Tery_2310  carbamoyl phosphate synthase small subunit  45.11 
 
 
384 aa  323  2e-87  Trichodesmium erythraeum IMS101  Bacteria  normal  normal  0.162276 
 
 
-
 
NC_007760  Adeh_1620  carbamoyl phosphate synthase small subunit  44.24 
 
 
373 aa  323  3e-87  Anaeromyxobacter dehalogenans 2CP-C  Bacteria  normal  0.394714  n/a   
 
 
-
 
NC_009997  Sbal195_3526  carbamoyl phosphate synthase small subunit  45.65 
 
 
386 aa  323  3e-87  Shewanella baltica OS195  Bacteria  normal  normal 
 
 
-
 
NC_011138  MADE_02244  carbamoyl-phosphate synthase small subunit  45.38 
 
 
440 aa  322  5e-87  Alteromonas macleodii 'Deep ecotype'  Bacteria  normal  0.0231375  n/a   
 
 
-
 
NC_009665  Shew185_3401  carbamoyl phosphate synthase small subunit  45.26 
 
 
391 aa  322  5e-87  Shewanella baltica OS185  Bacteria  hitchhiker  0.00720177  n/a   
 
 
-
 
NC_010506  Swoo_3578  carbamoyl phosphate synthase small subunit  44.83 
 
 
381 aa  322  5e-87  Shewanella woodyi ATCC 51908  Bacteria  normal  0.0674639  normal  0.11278 
 
 
-
 
NC_008228  Patl_2215  carbamoyl-phosphate synthase, small subunit  45.72 
 
 
381 aa  322  5e-87  Pseudoalteromonas atlantica T6c  Bacteria  hitchhiker  0.000311671  n/a   
 
 
-
 
NC_011663  Sbal223_1051  carbamoyl phosphate synthase small subunit  45.17 
 
 
387 aa  322  7e-87  Shewanella baltica OS223  Bacteria  normal  0.098868  hitchhiker  0.0000017806 
 
 
-
 
NC_011060  Ppha_0218  carbamoyl phosphate synthase small subunit  44.2 
 
 
367 aa  322  8e-87  Pelodictyon phaeoclathratiforme BU-1  Bacteria  normal  n/a   
 
 
-
 
NC_007912  Sde_2729  carbamoyl-phosphate synthase small subunit  44.35 
 
 
387 aa  322  9.000000000000001e-87  Saccharophagus degradans 2-40  Bacteria  normal  0.422158  normal 
 
 
-
 
NC_008025  Dgeo_2060  carbamoyl phosphate synthase small subunit  43.39 
 
 
394 aa  321  9.999999999999999e-87  Deinococcus geothermalis DSM 11300  Bacteria  normal  normal  0.745912 
 
 
-
 
NC_008740  Maqu_3359  carbamoyl-phosphate synthase, small subunit  43.55 
 
 
381 aa  321  9.999999999999999e-87  Marinobacter aquaeolei VT8  Bacteria  normal  0.365692  n/a   
 
 
-
 
NC_009654  Mmwyl1_4035  carbamoyl phosphate synthase small subunit  44.35 
 
 
396 aa  320  1.9999999999999998e-86  Marinomonas sp. MWYL1  Bacteria  normal  0.311643  normal 
 
 
-
 
NC_009783  VIBHAR_00912  carbamoyl phosphate synthase small subunit  44.59 
 
 
416 aa  320  3e-86  Vibrio harveyi ATCC BAA-1116  Bacteria  n/a    n/a   
 
 
-
 
NC_011312  VSAL_I0585  carbamoyl phosphate synthase small subunit  44.06 
 
 
384 aa  319  3.9999999999999996e-86  Aliivibrio salmonicida LFI1238  Bacteria  normal  0.0152244  n/a   
 
 
-
 
NC_009455  DehaBAV1_1011  carbamoyl phosphate synthase small subunit  44.35 
 
 
364 aa  318  7.999999999999999e-86  Dehalococcoides sp. BAV1  Bacteria  normal  n/a   
 
 
-
 
NC_013456  VEA_004479  carbamoyl-phosphate synthase small chain  44.27 
 
 
379 aa  318  9e-86  Vibrio sp. Ex25  Bacteria  normal  n/a   
 
 
-
 
NC_009523  RoseRS_4055  carbamoyl-phosphate synthase, small subunit  46.03 
 
 
386 aa  318  9e-86  Roseiflexus sp. RS-1  Bacteria  normal  0.103191  normal 
 
 
-
 
NC_007298  Daro_0938  carbamoyl-phosphate synthase small subunit  44.81 
 
 
385 aa  318  1e-85  Dechloromonas aromatica RCB  Bacteria  normal  0.742428  normal 
 
 
-
 
NC_007954  Sden_0995  carbamoyl phosphate synthase small subunit  44.65 
 
 
381 aa  318  1e-85  Shewanella denitrificans OS217  Bacteria  normal  0.055995  n/a   
 
 
-
 
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