More than 300 homologs were found in PanDaTox collection
for query gene Lreu_0930 on replicon NC_009513
Organism: Lactobacillus reuteri DSM 20016



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_009513  Lreu_0930  carbamoyl phosphate synthase small subunit  100 
 
 
361 aa  737    Lactobacillus reuteri DSM 20016  Bacteria  normal  n/a   
 
 
-
 
NC_008531  LEUM_1371  carbamoyl-phosphate synthase small subunit  54.75 
 
 
359 aa  420  1e-116  Leuconostoc mesenteroides subsp. mesenteroides ATCC 8293  Bacteria  normal  0.850128  n/a   
 
 
-
 
NC_008527  LACR_1709  carbamoyl phosphate synthase small subunit  49.3 
 
 
357 aa  356  2.9999999999999997e-97  Lactococcus lactis subsp. cremoris SK11  Bacteria  normal  n/a   
 
 
-
 
NC_008532  STER_0558  carbamoyl phosphate synthase small subunit  48.74 
 
 
362 aa  355  5.999999999999999e-97  Streptococcus thermophilus LMD-9  Bacteria  normal  n/a   
 
 
-
 
NC_004116  SAG1043  carbamoyl phosphate synthase small subunit  48.31 
 
 
358 aa  348  7e-95  Streptococcus agalactiae 2603V/R  Bacteria  normal  n/a   
 
 
-
 
NC_008530  LGAS_1088  carbamoyl phosphate synthase small subunit  48.48 
 
 
362 aa  348  8e-95  Lactobacillus gasseri ATCC 33323  Bacteria  normal  normal 
 
 
-
 
NC_012793  GWCH70_1046  carbamoyl phosphate synthase small subunit  45.89 
 
 
364 aa  336  2.9999999999999997e-91  Geobacillus sp. WCH70  Bacteria  normal  n/a   
 
 
-
 
NC_013411  GYMC61_1916  carbamoyl phosphate synthase small subunit  46.54 
 
 
364 aa  331  1e-89  Geobacillus sp. Y412MC61  Bacteria  n/a    n/a   
 
 
-
 
NC_011773  BCAH820_3901  carbamoyl phosphate synthase small subunit  45.71 
 
 
365 aa  331  2e-89  Bacillus cereus AH820  Bacteria  n/a    hitchhiker  0.0000000355158 
 
 
-
 
NC_005945  BAS3738  carbamoyl phosphate synthase small subunit  45.71 
 
 
365 aa  331  2e-89  Bacillus anthracis str. Sterne  Bacteria  normal  n/a   
 
 
-
 
NC_005957  BT9727_3629  carbamoyl phosphate synthase small subunit  45.71 
 
 
365 aa  331  2e-89  Bacillus thuringiensis serovar konkukian str. 97-27  Bacteria  normal  n/a   
 
 
-
 
NC_007530  GBAA_4026  carbamoyl phosphate synthase small subunit  45.71 
 
 
365 aa  331  2e-89  Bacillus anthracis str. 'Ames Ancestor'  Bacteria  normal  0.0667428  n/a   
 
 
-
 
NC_003909  BCE_3932  carbamoyl phosphate synthase small subunit  45.43 
 
 
365 aa  330  3e-89  Bacillus cereus ATCC 10987  Bacteria  normal  n/a   
 
 
-
 
NC_011772  BCG9842_B1256  carbamoyl phosphate synthase small subunit  45.04 
 
 
365 aa  330  3e-89  Bacillus cereus G9842  Bacteria  normal  normal 
 
 
-
 
NC_011658  BCAH187_A3936  carbamoyl phosphate synthase small subunit  45.43 
 
 
365 aa  330  3e-89  Bacillus cereus AH187  Bacteria  normal  0.0146429  n/a   
 
 
-
 
NC_006274  BCZK3646  carbamoyl phosphate synthase small subunit  45.43 
 
 
365 aa  329  5.0000000000000004e-89  Bacillus cereus E33L  Bacteria  normal  n/a   
 
 
-
 
NC_011725  BCB4264_A3985  carbamoyl phosphate synthase small subunit  45.43 
 
 
365 aa  329  5.0000000000000004e-89  Bacillus cereus B4264  Bacteria  normal  0.289727  n/a   
 
 
-
 
NC_009674  Bcer98_2536  carbamoyl phosphate synthase small subunit  45.43 
 
 
373 aa  328  1.0000000000000001e-88  Bacillus cytotoxicus NVH 391-98  Bacteria  normal  0.0261621  n/a   
 
 
-
 
NC_010184  BcerKBAB4_3714  carbamoyl phosphate synthase small subunit  45.43 
 
 
365 aa  327  3e-88  Bacillus weihenstephanensis KBAB4  Bacteria  normal  0.971369  n/a   
 
 
-
 
NC_009513  Lreu_0086  carbamoyl phosphate synthase small subunit  43.75 
 
 
362 aa  310  2e-83  Lactobacillus reuteri DSM 20016  Bacteria  hitchhiker  0.000481793  n/a   
 
 
-
 
NC_008528  OEOE_0260  carbamoyl-phosphate synthase small subunit  41.83 
 
 
363 aa  310  2.9999999999999997e-83  Oenococcus oeni PSU-1  Bacteria  normal  0.734432  n/a   
 
 
-
 
NC_002976  SERP0768  carbamoyl phosphate synthase small subunit  43.54 
 
 
366 aa  307  2.0000000000000002e-82  Staphylococcus epidermidis RP62A  Bacteria  normal  n/a   
 
 
-
 
NC_014150  Bmur_2483  carbamoyl-phosphate synthase, small subunit  43.1 
 
 
359 aa  304  1.0000000000000001e-81  Brachyspira murdochii DSM 12563  Bacteria  hitchhiker  0.0000863462  n/a   
 
 
-
 
NC_009487  SaurJH9_1261  carbamoyl phosphate synthase small subunit  43.8 
 
 
366 aa  304  2.0000000000000002e-81  Staphylococcus aureus subsp. aureus JH9  Bacteria  normal  n/a   
 
 
-
 
NC_009632  SaurJH1_1286  carbamoyl phosphate synthase small subunit  43.8 
 
 
366 aa  304  2.0000000000000002e-81  Staphylococcus aureus subsp. aureus JH1  Bacteria  normal  0.510283  n/a   
 
 
-
 
NC_004116  SAG1363  carbamoyl phosphate synthase small subunit  41.67 
 
 
356 aa  302  5.000000000000001e-81  Streptococcus agalactiae 2603V/R  Bacteria  normal  0.013904  n/a   
 
 
-
 
NC_008531  LEUM_1208  carbamoyl-phosphate synthase small subunit  40.96 
 
 
361 aa  296  3e-79  Leuconostoc mesenteroides subsp. mesenteroides ATCC 8293  Bacteria  unclonable  0.0000951644  n/a   
 
 
-
 
NC_009012  Cthe_0950  carbamoyl-phosphate synthase small subunit  42.09 
 
 
357 aa  288  8e-77  Clostridium thermocellum ATCC 27405  Bacteria  normal  n/a   
 
 
-
 
NC_009253  Dred_1683  carbamoyl-phosphate synthase, small subunit  38.48 
 
 
359 aa  265  1e-69  Desulfotomaculum reducens MI-1  Bacteria  hitchhiker  0.0000104913  n/a   
 
 
-
 
NC_013205  Aaci_1307  carbamoyl-phosphate synthase, small subunit  40.06 
 
 
368 aa  263  4e-69  Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446  Bacteria  normal  n/a   
 
 
-
 
NC_013525  Tter_1371  carbamoyl-phosphate synthase, small subunit  39.84 
 
 
368 aa  262  6e-69  Thermobaculum terrenum ATCC BAA-798  Bacteria  n/a    n/a   
 
 
-
 
NC_007644  Moth_0881  carbamoyl-phosphate synthase small subunit  38.75 
 
 
361 aa  258  8e-68  Moorella thermoacetica ATCC 39073  Bacteria  normal  normal 
 
 
-
 
NC_011899  Hore_02880  carbamoyl-phosphate synthase, small subunit  39.34 
 
 
364 aa  258  8e-68  Halothermothrix orenii H 168  Bacteria  normal  0.422195  n/a   
 
 
-
 
NC_011898  Ccel_2913  carbamoyl-phosphate synthase, small subunit  38.7 
 
 
351 aa  251  1e-65  Clostridium cellulolyticum H10  Bacteria  normal  n/a   
 
 
-
 
NC_013385  Adeg_0372  carbamoyl-phosphate synthase, small subunit  37.29 
 
 
359 aa  251  2e-65  Ammonifex degensii KC4  Bacteria  normal  0.386907  n/a   
 
 
-
 
NC_008261  CPF_2898  carbamoyl phosphate synthase small subunit  40.11 
 
 
349 aa  250  3e-65  Clostridium perfringens ATCC 13124  Bacteria  normal  n/a   
 
 
-
 
NC_009012  Cthe_1867  carbamoyl-phosphate synthase small subunit  38.76 
 
 
354 aa  250  3e-65  Clostridium thermocellum ATCC 27405  Bacteria  normal  n/a   
 
 
-
 
NC_011898  Ccel_0615  carbamoyl-phosphate synthase, small subunit  39.04 
 
 
360 aa  249  4e-65  Clostridium cellulolyticum H10  Bacteria  normal  n/a   
 
 
-
 
NC_013216  Dtox_2353  carbamoyl-phosphate synthase, small subunit  37.15 
 
 
358 aa  248  8e-65  Desulfotomaculum acetoxidans DSM 771  Bacteria  decreased coverage  0.00528586  normal 
 
 
-
 
NC_008262  CPR_2577  carbamoyl phosphate synthase small subunit  39.83 
 
 
349 aa  248  1e-64  Clostridium perfringens SM101  Bacteria  normal  n/a   
 
 
-
 
NC_011884  Cyan7425_1942  carbamoyl phosphate synthase small subunit  36.83 
 
 
389 aa  248  1e-64  Cyanothece sp. PCC 7425  Bacteria  normal  0.230816  normal  0.202912 
 
 
-
 
NC_008639  Cpha266_2459  carbamoyl phosphate synthase small subunit  37.67 
 
 
369 aa  248  1e-64  Chlorobium phaeobacteroides DSM 266  Bacteria  normal  0.420642  n/a   
 
 
-
 
NC_012034  Athe_1540  carbamoyl-phosphate synthase, small subunit  36.77 
 
 
356 aa  246  6e-64  Anaerocellum thermophilum DSM 6725  Bacteria  normal  n/a   
 
 
-
 
NC_007604  Synpcc7942_2122  carbamoyl phosphate synthase small subunit  38.4 
 
 
391 aa  244  9.999999999999999e-64  Synechococcus elongatus PCC 7942  Bacteria  normal  normal  0.618886 
 
 
-
 
NC_011059  Paes_2113  carbamoyl phosphate synthase small subunit  37.77 
 
 
371 aa  243  3.9999999999999997e-63  Prosthecochloris aestuarii DSM 271  Bacteria  unclonable  0.000000000982338  normal  0.988223 
 
 
-
 
NC_008009  Acid345_2194  carbamoyl-phosphate synthase small subunit  37.5 
 
 
373 aa  243  3.9999999999999997e-63  Candidatus Koribacter versatilis Ellin345  Bacteria  normal  normal 
 
 
-
 
NC_010320  Teth514_0661  carbamoyl phosphate synthase small subunit  36.39 
 
 
356 aa  242  6e-63  Thermoanaerobacter sp. X514  Bacteria  normal  n/a   
 
 
-
 
NC_007512  Plut_0156  carbamoyl phosphate synthase small subunit  37.33 
 
 
369 aa  241  2e-62  Chlorobium luteolum DSM 273  Bacteria  normal  0.983052  normal  0.416855 
 
 
-
 
NC_010831  Cphamn1_2349  carbamoyl phosphate synthase small subunit  38.5 
 
 
366 aa  241  2e-62  Chlorobium phaeobacteroides BS1  Bacteria  normal  normal 
 
 
-
 
NC_011729  PCC7424_3196  carbamoyl phosphate synthase small subunit  36.93 
 
 
379 aa  238  1e-61  Cyanothece sp. PCC 7424  Bacteria  n/a    normal  0.0368063 
 
 
-
 
NC_008312  Tery_2310  carbamoyl phosphate synthase small subunit  36.24 
 
 
384 aa  238  1e-61  Trichodesmium erythraeum IMS101  Bacteria  normal  normal  0.162276 
 
 
-
 
NC_007514  Cag_0107  carbamoyl phosphate synthase small subunit  37.74 
 
 
367 aa  236  6e-61  Chlorobium chlorochromatii CaD3  Bacteria  normal  n/a   
 
 
-
 
NC_012793  GWCH70_0740  carbamoyl phosphate synthase small subunit  37.01 
 
 
356 aa  236  6e-61  Geobacillus sp. WCH70  Bacteria  normal  n/a   
 
 
-
 
NC_011830  Dhaf_3203  carbamoyl-phosphate synthase, small subunit  37.87 
 
 
368 aa  236  6e-61  Desulfitobacterium hafniense DCB-2  Bacteria  normal  n/a   
 
 
-
 
NC_003910  CPS_3459  carbamoyl phosphate synthase small subunit  36 
 
 
383 aa  235  8e-61  Colwellia psychrerythraea 34H  Bacteria  normal  n/a   
 
 
-
 
NC_011138  MADE_02244  carbamoyl-phosphate synthase small subunit  36.22 
 
 
440 aa  233  5e-60  Alteromonas macleodii 'Deep ecotype'  Bacteria  normal  0.0231375  n/a   
 
 
-
 
NC_007413  Ava_4410  carbamoyl phosphate synthase small subunit  35.5 
 
 
388 aa  232  9e-60  Anabaena variabilis ATCC 29413  Bacteria  normal  normal  0.924948 
 
 
-
 
NC_008228  Patl_2215  carbamoyl-phosphate synthase, small subunit  37.6 
 
 
381 aa  232  9e-60  Pseudoalteromonas atlantica T6c  Bacteria  hitchhiker  0.000311671  n/a   
 
 
-
 
NC_011894  Mnod_4526  carbamoyl-phosphate synthase, small subunit  38.16 
 
 
405 aa  231  1e-59  Methylobacterium nodulans ORS 2060  Bacteria  normal  0.717788  n/a   
 
 
-
 
NC_011761  AFE_0640  carbamoyl-phosphate synthase, small subunit  34.31 
 
 
380 aa  231  1e-59  Acidithiobacillus ferrooxidans ATCC 23270  Bacteria  normal  n/a   
 
 
-
 
NC_011206  Lferr_0790  carbamoyl-phosphate synthase, small subunit  34.31 
 
 
380 aa  231  1e-59  Acidithiobacillus ferrooxidans ATCC 53993  Bacteria  normal  normal 
 
 
-
 
NC_011060  Ppha_0218  carbamoyl phosphate synthase small subunit  36.41 
 
 
367 aa  230  3e-59  Pelodictyon phaeoclathratiforme BU-1  Bacteria  normal  n/a   
 
 
-
 
NC_013411  GYMC61_1597  carbamoyl phosphate synthase small subunit  36.77 
 
 
354 aa  230  4e-59  Geobacillus sp. Y412MC61  Bacteria  n/a    n/a   
 
 
-
 
NC_011830  Dhaf_4017  carbamoyl-phosphate synthase, small subunit  35.67 
 
 
367 aa  229  4e-59  Desulfitobacterium hafniense DCB-2  Bacteria  normal  n/a   
 
 
-
 
NC_014148  Plim_2032  carbamoyl-phosphate synthase, small subunit  35.75 
 
 
383 aa  229  6e-59  Planctomyces limnophilus DSM 3776  Bacteria  unclonable  0.000000277554  n/a   
 
 
-
 
NC_011126  HY04AAS1_0951  carbamoyl-phosphate synthase, small subunit  37.29 
 
 
352 aa  229  6e-59  Hydrogenobaculum sp. Y04AAS1  Bacteria  hitchhiker  0.00000000113034  n/a   
 
 
-
 
NC_008740  Maqu_3359  carbamoyl-phosphate synthase, small subunit  35.47 
 
 
381 aa  228  1e-58  Marinobacter aquaeolei VT8  Bacteria  normal  0.365692  n/a   
 
 
-
 
NC_007298  Daro_0938  carbamoyl-phosphate synthase small subunit  35.66 
 
 
385 aa  227  2e-58  Dechloromonas aromatica RCB  Bacteria  normal  0.742428  normal 
 
 
-
 
NC_010424  Daud_1303  carbamoyl-phosphate synthase, small subunit  35.1 
 
 
359 aa  227  2e-58  Candidatus Desulforudis audaxviator MP104C  Bacteria  normal  0.0780078  n/a   
 
 
-
 
NC_014248  Aazo_2282  carbamoyl-phosphate synthase small subunit  33.6 
 
 
385 aa  226  3e-58  'Nostoc azollae' 0708  Bacteria  normal  0.332421  n/a   
 
 
-
 
NC_007912  Sde_2729  carbamoyl-phosphate synthase small subunit  37.2 
 
 
387 aa  226  4e-58  Saccharophagus degradans 2-40  Bacteria  normal  0.422158  normal 
 
 
-
 
NC_007498  Pcar_1613  carbamoyl phosphate synthase small subunit  36.59 
 
 
376 aa  226  5.0000000000000005e-58  Pelobacter carbinolicus DSM 2380  Bacteria  normal  0.0266912  n/a   
 
 
-
 
NC_008817  P9515_10341  carbamoyl phosphate synthase small subunit  35.71 
 
 
379 aa  225  1e-57  Prochlorococcus marinus str. MIT 9515  Bacteria  normal  n/a   
 
 
-
 
NC_010511  M446_3210  carbamoyl-phosphate synthase, small subunit  36.68 
 
 
405 aa  224  1e-57  Methylobacterium sp. 4-46  Bacteria  normal  normal  0.295908 
 
 
-
 
NC_008700  Sama_2504  carbamoyl phosphate synthase small subunit  34.32 
 
 
381 aa  225  1e-57  Shewanella amazonensis SB2B  Bacteria  normal  0.323519  normal 
 
 
-
 
NC_008025  Dgeo_2060  carbamoyl phosphate synthase small subunit  34.68 
 
 
394 aa  224  1e-57  Deinococcus geothermalis DSM 11300  Bacteria  normal  normal  0.745912 
 
 
-
 
NC_009901  Spea_3075  carbamoyl phosphate synthase small subunit  34.86 
 
 
381 aa  224  2e-57  Shewanella pealeana ATCC 700345  Bacteria  normal  0.0335125  n/a   
 
 
-
 
NC_007614  Nmul_A0478  carbamoyl-phosphate synthase, small subunit  35.48 
 
 
383 aa  224  2e-57  Nitrosospira multiformis ATCC 25196  Bacteria  normal  n/a   
 
 
-
 
NC_007947  Mfla_0778  carbamoyl-phosphate synthase small subunit  34.85 
 
 
376 aa  224  2e-57  Methylobacillus flagellatus KT  Bacteria  normal  0.42563  hitchhiker  0.000147727 
 
 
-
 
NC_009438  Sputcn32_2940  carbamoyl phosphate synthase small subunit  34.95 
 
 
386 aa  224  2e-57  Shewanella putrefaciens CN-32  Bacteria  normal  0.185194  n/a   
 
 
-
 
NC_008345  Sfri_0975  carbamoyl phosphate synthase small subunit  34.23 
 
 
381 aa  224  2e-57  Shewanella frigidimarina NCIMB 400  Bacteria  hitchhiker  0.00141878  n/a   
 
 
-
 
NC_013421  Pecwa_3841  carbamoyl phosphate synthase small subunit  34.13 
 
 
382 aa  224  2e-57  Pectobacterium wasabiae WPP163  Bacteria  normal  n/a   
 
 
-
 
NC_013552  DhcVS_984  carbamoyl-phosphate synthase, small subunit  35.91 
 
 
364 aa  223  3e-57  Dehalococcoides sp. VS  Bacteria  normal  n/a   
 
 
-
 
NC_010803  Clim_2299  carbamoyl phosphate synthase small subunit  35.97 
 
 
369 aa  223  3e-57  Chlorobium limicola DSM 245  Bacteria  hitchhiker  0.0000401664  n/a   
 
 
-
 
NC_002936  DET1201  carbamoyl phosphate synthase small subunit  36.19 
 
 
364 aa  223  4e-57  Dehalococcoides ethenogenes 195  Bacteria  normal  n/a   
 
 
-
 
NC_009455  DehaBAV1_1011  carbamoyl phosphate synthase small subunit  36.39 
 
 
364 aa  223  4e-57  Dehalococcoides sp. BAV1  Bacteria  normal  n/a   
 
 
-
 
NC_013161  Cyan8802_0390  carbamoyl phosphate synthase small subunit  35.03 
 
 
380 aa  223  4.9999999999999996e-57  Cyanothece sp. PCC 8802  Bacteria  normal  normal 
 
 
-
 
NC_011726  PCC8801_0381  carbamoyl phosphate synthase small subunit  35.03 
 
 
380 aa  223  4.9999999999999996e-57  Cyanothece sp. PCC 8801  Bacteria  n/a    n/a   
 
 
-
 
NC_012917  PC1_3648  carbamoyl phosphate synthase small subunit  34.13 
 
 
382 aa  223  4.9999999999999996e-57  Pectobacterium carotovorum subsp. carotovorum PC1  Bacteria  normal  0.48497  n/a   
 
 
-
 
NC_009379  Pnuc_1019  carbamoyl-phosphate synthase, small subunit  35.17 
 
 
397 aa  223  4.9999999999999996e-57  Polynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1  Bacteria  normal  n/a   
 
 
-
 
NC_008554  Sfum_0009  carbamoyl phosphate synthase small subunit  35.33 
 
 
391 aa  223  4.9999999999999996e-57  Syntrophobacter fumaroxidans MPOB  Bacteria  normal  0.35972  normal 
 
 
-
 
NC_008576  Mmc1_3019  carbamoyl-phosphate synthase small subunit  35.66 
 
 
377 aa  223  4.9999999999999996e-57  Magnetococcus sp. MC-1  Bacteria  normal  normal 
 
 
-
 
NC_007954  Sden_0995  carbamoyl phosphate synthase small subunit  34.95 
 
 
381 aa  222  6e-57  Shewanella denitrificans OS217  Bacteria  normal  0.055995  n/a   
 
 
-
 
NC_010003  Pmob_1699  carbamoyl phosphate synthase small subunit  34.54 
 
 
347 aa  222  7e-57  Petrotoga mobilis SJ95  Bacteria  normal  0.213064  n/a   
 
 
-
 
NC_011312  VSAL_I0585  carbamoyl phosphate synthase small subunit  34.13 
 
 
384 aa  222  7e-57  Aliivibrio salmonicida LFI1238  Bacteria  normal  0.0152244  n/a   
 
 
-
 
NC_004347  SO_1141  carbamoyl phosphate synthase small subunit  35.5 
 
 
386 aa  222  8e-57  Shewanella oneidensis MR-1  Bacteria  n/a    n/a   
 
 
-
 
NC_010718  Nther_2445  carbamoyl-phosphate synthase, small subunit  34.63 
 
 
399 aa  222  8e-57  Natranaerobius thermophilus JW/NM-WN-LF  Bacteria  normal  normal 
 
 
-
 
NC_009831  Ssed_3404  carbamoyl phosphate synthase small subunit  34.51 
 
 
385 aa  222  8e-57  Shewanella sediminis HAW-EB3  Bacteria  normal  hitchhiker  0.0000786314 
 
 
-
 
NC_009091  P9301_09071  carbamoyl phosphate synthase small subunit  34.58 
 
 
379 aa  222  9e-57  Prochlorococcus marinus str. MIT 9301  Bacteria  normal  n/a   
 
 
-
 
NC_009092  Shew_2839  carbamoyl phosphate synthase small subunit  33.96 
 
 
390 aa  222  9e-57  Shewanella loihica PV-4  Bacteria  hitchhiker  0.00340084  normal  0.0286195 
 
 
-
 
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