More than 300 homologs were found in PanDaTox collection
for query gene Cphy_3630 on replicon NC_010001
Organism: Clostridium phytofermentans ISDg



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Replicon accession
Locus tag
Product
% identity
Alignment on query gene
Alignment on homolog gene
Length
Bit score

E-value
Organism name
Kingdom
Plasmid clonability
Plasmid unclonability p-value
Fosmid clonability
Fosmid unclonability p-value
Coverage Plot
PanDaTox homologs
Experimental validation
NC_010001  Cphy_3630  two component LuxR family transcriptional regulator  100 
 
 		 232 aa  464  9.999999999999999e-131  Clostridium phytofermentans ISDg  Bacteria  hitchhiker  0.00295856  n/a   
 
 
-
 
NC_014165  Tbis_0775  LuxR family two component transcriptional regulator  36.62 
 
 		 234 aa  143  3e-33  Thermobispora bispora DSM 43833  Bacteria  normal  1  normal  0.336237 
 
 
-
 
NC_010718  Nther_0747  two component transcriptional regulator, LuxR family  34.5 
 
 		 232 aa  141  7e-33  Natranaerobius thermophilus JW/NM-WN-LF  Bacteria  normal  0.643618  normal  0.38139 
 
 
-
 
NC_007413  Ava_2028  two component LuxR family transcriptional regulator  36.7 
 
 		 219 aa  140  1.9999999999999998e-32  Anabaena variabilis ATCC 29413  Bacteria  normal  0.515359  normal  1 
 
 
-
 
NC_009674  Bcer98_0214  two component LuxR family transcriptional regulator  34.4 
 
 		 220 aa  139  3e-32  Bacillus cytotoxicus NVH 391-98  Bacteria  normal  1  n/a   
 
 
-
 
NC_012034  Athe_2627  two component transcriptional regulator, LuxR family  36.36 
 
 		 211 aa  139  3.9999999999999997e-32  Anaerocellum thermophilum DSM 6725  Bacteria  normal  1  n/a   
 
 
-
 
NC_013757  Gobs_4064  two component transcriptional regulator, LuxR family  32.87 
 
 		 217 aa  139  3.9999999999999997e-32  Geodermatophilus obscurus DSM 43160  Bacteria  normal  1  n/a   
 
 
-
 
NC_014248  Aazo_0236  LuxR family two component transcriptional regulator  36.7 
 
 		 218 aa  139  4.999999999999999e-32  'Nostoc azollae' 0708  Bacteria  normal  1  n/a   
 
 
-
 
NC_013595  Sros_1417  response regulator receiver protein  35.21 
 
 		 234 aa  139  4.999999999999999e-32  Streptosporangium roseum DSM 43021  Bacteria  normal  1  normal  0.0224272 
 
 
-
 
NC_013159  Svir_00210  response regulator containing a CheY-like receiver domain protein and an HTH DNA-binding domain protein  34.88 
 
 		 221 aa  136  2e-31  Saccharomonospora viridis DSM 43017  Bacteria  normal  1  normal  0.133182 
 
 
-
 
NC_014210  Ndas_4366  two component transcriptional regulator, LuxR family  33.63 
 
 		 225 aa  137  2e-31  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  1  normal  1 
 
 
-
 
NC_013131  Caci_6963  two component transcriptional regulator, LuxR family  33.49 
 
 		 225 aa  136  3.0000000000000003e-31  Catenulispora acidiphila DSM 44928  Bacteria  normal  0.029709  normal  1 
 
 
-
 
NC_008148  Rxyl_1550  two component LuxR family transcriptional regulator  34.98 
 
 		 220 aa  135  7.000000000000001e-31  Rubrobacter xylanophilus DSM 9941  Bacteria  normal  1  n/a   
 
 
-
 
NC_012803  Mlut_21850  response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain  30.99 
 
 		 222 aa  134  9.999999999999999e-31  Micrococcus luteus NCTC 2665  Bacteria  normal  0.118113  n/a   
 
 
-
 
NC_010184  BcerKBAB4_5205  two component LuxR family transcriptional regulator  34.82 
 
 		 215 aa  133  3e-30  Bacillus weihenstephanensis KBAB4  Bacteria  normal  1  n/a   
 
 
-
 
NC_011884  Cyan7425_1401  two component transcriptional regulator, LuxR family  33.64 
 
 		 217 aa  132  5e-30  Cyanothece sp. PCC 7425  Bacteria  normal  1  normal  0.482316 
 
 
-
 
NC_013947  Snas_3040  two component transcriptional regulator, LuxR family  36.45 
 
 		 224 aa  132  6e-30  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  0.0154763  normal  1 
 
 
-
 
NC_013131  Caci_0175  two component transcriptional regulator, LuxR family  34.08 
 
 		 222 aa  131  6.999999999999999e-30  Catenulispora acidiphila DSM 44928  Bacteria  normal  1  normal  1 
 
 
-
 
NC_011884  Cyan7425_3249  two component transcriptional regulator, LuxR family  35.32 
 
 		 211 aa  131  9e-30  Cyanothece sp. PCC 7425  Bacteria  normal  0.414819  normal  0.558116 
 
 
-
 
NC_011831  Cagg_2804  two component transcriptional regulator, LuxR family  33.94 
 
 		 216 aa  131  1.0000000000000001e-29  Chloroflexus aggregans DSM 9485  Bacteria  normal  0.995251  normal  0.311692 
 
 
-
 
NC_009921  Franean1_5840  two component LuxR family transcriptional regulator  36.74 
 
 		 237 aa  131  1.0000000000000001e-29  Frankia sp. EAN1pec  Bacteria  normal  0.0206065  normal  0.380036 
 
 
-
 
NC_011773  BCAH820_5506  DNA-binding response regulator  34.82 
 
 		 215 aa  130  2.0000000000000002e-29  Bacillus cereus AH820  Bacteria  n/a    normal  1 
 
 
-
 
NC_005945  BAS5263  DNA-binding response regulator  34.82 
 
 		 215 aa  130  2.0000000000000002e-29  Bacillus anthracis str. Sterne  Bacteria  normal  0.24037  n/a   
 
 
-
 
NC_005957  BT9727_5091  response regulator  34.82 
 
 		 215 aa  130  2.0000000000000002e-29  Bacillus thuringiensis serovar konkukian str. 97-27  Bacteria  normal  1  n/a   
 
 
-
 
NC_006274  BCZK5108  response regulator  34.82 
 
 		 215 aa  130  2.0000000000000002e-29  Bacillus cereus E33L  Bacteria  decreased coverage  0.00235048  n/a   
 
 
-
 
NC_013441  Gbro_4528  response regulator receiver  37.04 
 
 		 213 aa  130  2.0000000000000002e-29  Gordonia bronchialis DSM 43247  Bacteria  normal  1  n/a   
 
 
-
 
NC_007530  GBAA_5661  DNA-binding response regulator  34.82 
 
 		 215 aa  130  2.0000000000000002e-29  Bacillus anthracis str. 'Ames Ancestor'  Bacteria  normal  1  n/a   
 
 
-
 
NC_011658  BCAH187_A5591  DNA-binding response regulator  34.82 
 
 		 215 aa  130  2.0000000000000002e-29  Bacillus cereus AH187  Bacteria  normal  1  n/a   
 
 
-
 
NC_012803  Mlut_02970  response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain  31.67 
 
 		 227 aa  130  2.0000000000000002e-29  Micrococcus luteus NCTC 2665  Bacteria  normal  0.611463  n/a   
 
 
-
 
NC_002967  TDE2324  DNA-binding response regulator  34.76 
 
 		 217 aa  129  4.0000000000000003e-29  Treponema denticola ATCC 35405  Bacteria  normal  1  n/a   
 
 
-
 
NC_003909  BCE_5540  DNA-binding response regulator  34.82 
 
 		 215 aa  129  4.0000000000000003e-29  Bacillus cereus ATCC 10987  Bacteria  normal  1  n/a   
 
 
-
 
NC_011725  BCB4264_A5535  DNA-binding response regulator  34.82 
 
 		 215 aa  129  4.0000000000000003e-29  Bacillus cereus B4264  Bacteria  normal  1  n/a   
 
 
-
 
NC_008554  Sfum_1664  two component LuxR family transcriptional regulator  34.21 
 
 		 218 aa  129  6e-29  Syntrophobacter fumaroxidans MPOB  Bacteria  normal  0.49018  normal  1 
 
 
-
 
NC_013204  Elen_2822  two component transcriptional regulator, LuxR family  33.33 
 
 		 228 aa  128  7.000000000000001e-29  Eggerthella lenta DSM 2243  Bacteria  normal  0.0415698  normal  0.590713 
 
 
-
 
NC_011772  BCG9842_B5417  DNA-binding response regulator  34.38 
 
 		 215 aa  128  8.000000000000001e-29  Bacillus cereus G9842  Bacteria  normal  1  normal  1 
 
 
-
 
NC_013510  Tcur_4038  two component transcriptional regulator, LuxR family  33.8 
 
 		 253 aa  128  8.000000000000001e-29  Thermomonospora curvata DSM 43183  Bacteria  normal  1  n/a   
 
 
-
 
NC_011898  Ccel_1863  two component transcriptional regulator, LuxR family  33.48 
 
 		 216 aa  127  1.0000000000000001e-28  Clostridium cellulolyticum H10  Bacteria  hitchhiker  0.00000548978  n/a   
 
 
-
 
NC_014210  Ndas_2024  two component transcriptional regulator, LuxR family  31.98 
 
 		 220 aa  127  1.0000000000000001e-28  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  0.876474  normal  1 
 
 
-
 
NC_013411  GYMC61_3240  two component transcriptional regulator, LuxR family  32.46 
 
 		 224 aa  127  1.0000000000000001e-28  Geobacillus sp. Y412MC61  Bacteria  n/a    n/a   
 
 
-
 
NC_009012  Cthe_1267  two component LuxR family transcriptional regulator  31.74 
 
 		 216 aa  126  2.0000000000000002e-28  Clostridium thermocellum ATCC 27405  Bacteria  normal  1  n/a   
 
 
-
 
NC_010001  Cphy_1240  two component LuxR family transcriptional regulator  33.48 
 
 		 207 aa  127  2.0000000000000002e-28  Clostridium phytofermentans ISDg  Bacteria  normal  1  n/a   
 
 
-
 
NC_009664  Krad_2537  two component transcriptional regulator, LuxR family  31.39 
 
 		 242 aa  126  2.0000000000000002e-28  Kineococcus radiotolerans SRS30216  Bacteria  normal  1  normal  1 
 
 
-
 
NC_011071  Smal_1099  two component transcriptional regulator, LuxR family  32.72 
 
 		 213 aa  126  3e-28  Stenotrophomonas maltophilia R551-3  Bacteria  normal  1  normal  1 
 
 
-
 
NC_009972  Haur_2171  two component LuxR family transcriptional regulator  34.4 
 
 		 218 aa  126  3e-28  Herpetosiphon aurantiacus ATCC 23779  Bacteria  normal  0.0762379  n/a   
 
 
-
 
NC_005945  BAS2109  LuxR family DNA-binding response regulator  33.48 
 
 		 209 aa  125  4.0000000000000003e-28  Bacillus anthracis str. Sterne  Bacteria  normal  1  n/a   
 
 
-
 
NC_011773  BCAH820_2290  DNA-binding response regulator, LuxR family  33.48 
 
 		 209 aa  125  4.0000000000000003e-28  Bacillus cereus AH820  Bacteria  n/a    hitchhiker  0.00000000000000736213 
 
 
-
 
NC_005957  BT9727_2048  response regulator  33.48 
 
 		 209 aa  125  4.0000000000000003e-28  Bacillus thuringiensis serovar konkukian str. 97-27  Bacteria  normal  0.102554  n/a   
 
 
-
 
NC_006274  BCZK2046  response regulator  33.48 
 
 		 209 aa  125  4.0000000000000003e-28  Bacillus cereus E33L  Bacteria  normal  1  n/a   
 
 
-
 
NC_007530  GBAA_2265  LuxR family DNA-binding response regulator  33.48 
 
 		 209 aa  125  4.0000000000000003e-28  Bacillus anthracis str. 'Ames Ancestor'  Bacteria  normal  0.201191  n/a   
 
 
-
 
NC_007777  Francci3_0765  two component LuxR family transcriptional regulator  35.68 
 
 		 237 aa  126  4.0000000000000003e-28  Frankia sp. CcI3  Bacteria  normal  0.272345  normal  1 
 
 
-
 
NC_013757  Gobs_2145  two component transcriptional regulator, LuxR family  30.66 
 
 		 220 aa  126  4.0000000000000003e-28  Geodermatophilus obscurus DSM 43160  Bacteria  normal  0.0196231  n/a   
 
 
-
 
NC_011658  BCAH187_A2375  DNA-binding response regulator, LuxR family  32.59 
 
 		 209 aa  125  4.0000000000000003e-28  Bacillus cereus AH187  Bacteria  normal  0.248491  n/a   
 
 
-
 
NC_009523  RoseRS_3421  two component LuxR family transcriptional regulator  30.88 
 
 		 223 aa  125  7e-28  Roseiflexus sp. RS-1  Bacteria  normal  1  normal  0.0556432 
 
 
-
 
NC_003909  BCE_2293  LuxR family DNA-binding response regulator  33.04 
 
 		 211 aa  125  8.000000000000001e-28  Bacillus cereus ATCC 10987  Bacteria  normal  1  n/a   
 
 
-
 
NC_010001  Cphy_0080  two component LuxR family transcriptional regulator  35.32 
 
 		 212 aa  125  8.000000000000001e-28  Clostridium phytofermentans ISDg  Bacteria  normal  1  n/a   
 
 
-
 
NC_010184  BcerKBAB4_2087  two component LuxR family transcriptional regulator  33.04 
 
 		 213 aa  124  1e-27  Bacillus weihenstephanensis KBAB4  Bacteria  normal  0.0358431  n/a   
 
 
-
 
NC_014151  Cfla_0648  two component transcriptional regulator, LuxR family  30.59 
 
 		 211 aa  124  1e-27  Cellulomonas flavigena DSM 20109  Bacteria  normal  0.0377209  hitchhiker  0.00104431 
 
 
-
 
NC_010717  PXO_04459  two-component system regulatory protein  32.39 
 
 		 213 aa  124  1e-27  Xanthomonas oryzae pv. oryzae PXO99A  Bacteria  normal  1  n/a   
 
 
-
 
NC_011831  Cagg_0340  two component transcriptional regulator, LuxR family  32.88 
 
 		 217 aa  123  2e-27  Chloroflexus aggregans DSM 9485  Bacteria  hitchhiker  0.00614189  hitchhiker  0.00317709 
 
 
-
 
NC_013739  Cwoe_2472  two component transcriptional regulator, LuxR family  30.14 
 
 		 221 aa  124  2e-27  Conexibacter woesei DSM 14684  Bacteria  normal  0.0113125  hitchhiker  0.00367669 
 
 
-
 
NC_006274  BCZK3023  response regulator  33.04 
 
 		 597 aa  123  2e-27  Bacillus cereus E33L  Bacteria  decreased coverage  0.000011368  n/a   
 
 
-
 
NC_007298  Daro_0834  LuxR response regulator receiver  31.39 
 
 		 221 aa  123  2e-27  Dechloromonas aromatica RCB  Bacteria  normal  1  normal  0.0179337 
 
 
-
 
NC_012669  Bcav_0404  two component transcriptional regulator, LuxR family  30.26 
 
 		 218 aa  123  2e-27  Beutenbergia cavernae DSM 12333  Bacteria  normal  0.0987348  normal  1 
 
 
-
 
NC_013411  GYMC61_1059  two component transcriptional regulator, LuxR family  36.24 
 
 		 221 aa  123  2e-27  Geobacillus sp. Y412MC61  Bacteria  n/a    n/a   
 
 
-
 
NC_010816  BLD_0642  putative response regulator  36.4 
 
 		 217 aa  124  2e-27  Bifidobacterium longum DJO10A  Bacteria  normal  1  n/a   
 
 
-
 
NC_013216  Dtox_3754  two component transcriptional regulator, LuxR family  34.26 
 
 		 216 aa  123  2e-27  Desulfotomaculum acetoxidans DSM 771  Bacteria  hitchhiker  0.00290124  normal  1 
 
 
-
 
NC_013385  Adeg_1034  two component transcriptional regulator, LuxR family  32.44 
 
 		 213 aa  123  2e-27  Ammonifex degensii KC4  Bacteria  normal  1  n/a   
 
 
-
 
NC_008699  Noca_1318  response regulator receiver  29.78 
 
 		 225 aa  124  2e-27  Nocardioides sp. JS614  Bacteria  normal  1  n/a   
 
 
-
 
NC_013595  Sros_3331  response regulator receiver protein  32.39 
 
 		 227 aa  124  2e-27  Streptosporangium roseum DSM 43021  Bacteria  normal  0.832029  normal  0.250763 
 
 
-
 
NC_008699  Noca_2635  response regulator receiver  33.03 
 
 		 207 aa  123  2e-27  Nocardioides sp. JS614  Bacteria  normal  1  n/a   
 
 
-
 
NC_009439  Pmen_4183  two component LuxR family transcriptional regulator  30.94 
 
 		 220 aa  123  2e-27  Pseudomonas mendocina ymp  Bacteria  normal  1  normal  1 
 
 
-
 
NC_009523  RoseRS_4258  two component LuxR family transcriptional regulator  33.18 
 
 		 216 aa  123  2e-27  Roseiflexus sp. RS-1  Bacteria  normal  1  normal  1 
 
 
-
 
NC_009767  Rcas_1142  two component LuxR family transcriptional regulator  31.34 
 
 		 222 aa  123  2e-27  Roseiflexus castenholzii DSM 13941  Bacteria  normal  0.661777  normal  1 
 
 
-
 
NC_011725  BCB4264_A2245  DNA-binding response regulator, LuxR family  30.8 
 
 		 213 aa  123  2e-27  Bacillus cereus B4264  Bacteria  normal  1  n/a   
 
 
-
 
NC_013947  Snas_5788  two component transcriptional regulator, LuxR family  31.72 
 
 		 214 aa  123  2e-27  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  1  normal  0.785726 
 
 
-
 
NC_013946  Mrub_1071  two component LuxR family transcriptional regulator  32.74 
 
 		 209 aa  123  3e-27  Meiothermus ruber DSM 1279  Bacteria  normal  1  normal  1 
 
 
-
 
NC_013595  Sros_6211  response regulator receiver protein  32.87 
 
 		 239 aa  123  3e-27  Streptosporangium roseum DSM 43021  Bacteria  normal  1  normal  0.377169 
 
 
-
 
NC_013739  Cwoe_0676  two component transcriptional regulator, LuxR family  30.4 
 
 		 215 aa  123  3e-27  Conexibacter woesei DSM 14684  Bacteria  normal  1  normal  1 
 
 
-
 
NC_003909  BCE_1863  LuxR family DNA-binding response regulator  35.14 
 
 		 218 aa  122  4e-27  Bacillus cereus ATCC 10987  Bacteria  normal  0.345514  n/a   
 
 
-
 
NC_013595  Sros_0553  response regulator receiver protein  32.39 
 
 		 213 aa  122  4e-27  Streptosporangium roseum DSM 43021  Bacteria  normal  0.82888  normal  1 
 
 
-
 
NC_011831  Cagg_1769  two component transcriptional regulator, LuxR family  31.19 
 
 		 219 aa  122  5e-27  Chloroflexus aggregans DSM 9485  Bacteria  normal  0.221401  normal  0.0578747 
 
 
-
 
NC_009664  Krad_4263  two component transcriptional regulator, LuxR family  30.14 
 
 		 230 aa  122  5e-27  Kineococcus radiotolerans SRS30216  Bacteria  normal  1  normal  0.455968 
 
 
-
 
NC_011725  BCB4264_A1802  DNA-binding response regulator, LuxR family  35.87 
 
 		 229 aa  122  5e-27  Bacillus cereus B4264  Bacteria  normal  1  n/a   
 
 
-
 
NC_009972  Haur_1104  two component LuxR family transcriptional regulator  32.68 
 
 		 218 aa  122  5e-27  Herpetosiphon aurantiacus ATCC 23779  Bacteria  normal  0.348687  n/a   
 
 
-
 
NC_011772  BCG9842_B3538  DNA-binding response regulator, LuxR family  35.87 
 
 		 223 aa  122  6e-27  Bacillus cereus G9842  Bacteria  normal  1  normal  1 
 
 
-
 
NC_011901  Tgr7_2171  two component transcriptional regulator, LuxR family  33.49 
 
 		 227 aa  122  7e-27  Thioalkalivibrio sp. HL-EbGR7  Bacteria  normal  1  n/a   
 
 
-
 
NC_013739  Cwoe_4937  two component transcriptional regulator, LuxR family  29.68 
 
 		 224 aa  121  7e-27  Conexibacter woesei DSM 14684  Bacteria  normal  0.570807  normal  0.210467 
 
 
-
 
NC_009664  Krad_3810  two component transcriptional regulator, LuxR family  31.78 
 
 		 236 aa  121  7e-27  Kineococcus radiotolerans SRS30216  Bacteria  normal  0.225059  normal  0.0261757 
 
 
-
 
NC_012792  Vapar_5556  two component transcriptional regulator, LuxR family  30.54 
 
 		 255 aa  121  8e-27  Variovorax paradoxus S110  Bacteria  normal  0.853701  n/a   
 
 
-
 
NC_013093  Amir_4051  two component transcriptional regulator, LuxR family  30.28 
 
 		 225 aa  121  9e-27  Actinosynnema mirum DSM 43827  Bacteria  decreased coverage  0.00308286  n/a   
 
 
-
 
NC_013757  Gobs_1986  two component transcriptional regulator, LuxR family  29.46 
 
 		 226 aa  121  9e-27  Geodermatophilus obscurus DSM 43160  Bacteria  normal  1  n/a   
 
 
-
 
NC_009972  Haur_4485  two component LuxR family transcriptional regulator  31.84 
 
 		 213 aa  121  9e-27  Herpetosiphon aurantiacus ATCC 23779  Bacteria  normal  0.310872  n/a   
 
 
-
 
NC_011658  BCAH187_A1913  DNA-binding response regulator, LuxR family  35 
 
 		 212 aa  120  9.999999999999999e-27  Bacillus cereus AH187  Bacteria  normal  0.605645  n/a   
 
 
-
 
NC_007777  Francci3_1039  two component LuxR family transcriptional regulator  35.65 
 
 		 238 aa  120  9.999999999999999e-27  Frankia sp. CcI3  Bacteria  normal  1  normal  0.135118 
 
 
-
 
NC_008148  Rxyl_2629  two component LuxR family transcriptional regulator  30.52 
 
 		 232 aa  120  9.999999999999999e-27  Rubrobacter xylanophilus DSM 9941  Bacteria  normal  0.312922  n/a   
 
 
-
 
NC_014212  Mesil_1051  two component transcriptional regulator, LuxR family  31.84 
 
 		 211 aa  121  9.999999999999999e-27  Meiothermus silvanus DSM 9946  Bacteria  normal  1  normal  0.0337978 
 
 
-
 
NC_013093  Amir_7009  two component transcriptional regulator, LuxR family  32.24 
 
 		 218 aa  120  1.9999999999999998e-26  Actinosynnema mirum DSM 43827  Bacteria  normal  0.0896567  n/a   
 
 
-
 
NC_011772  BCG9842_B3078  DNA-binding response regulator, LuxR family  30.8 
 
 		 213 aa  120  1.9999999999999998e-26  Bacillus cereus G9842  Bacteria  normal  1  hitchhiker  0.000000185138 
 
 
-
 
NC_008148  Rxyl_2613  two component LuxR family transcriptional regulator  32.27 
 
 		 207 aa  120  1.9999999999999998e-26  Rubrobacter xylanophilus DSM 9941  Bacteria  normal  1  n/a   
 
 
-
 
NC_013510  Tcur_1532  two component transcriptional regulator, LuxR family  31.65 
 
 		 220 aa  120  1.9999999999999998e-26  Thermomonospora curvata DSM 43183  Bacteria  normal  0.0114765  n/a   
 
 
-
 
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