| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cphy_3630 |
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| Symbol | |
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| ID | 5742654 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Clostridium phytofermentans ISDg |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010001 |
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| Strand | + |
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| Start bp | 4481009 |
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| End bp | 4481707 |
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| Gene Length | 699 bp |
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| Protein Length | 232 aa |
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| Translation table | 11 |
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| GC content | 35% |
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| IMG OID | 641294740 |
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| Product | two component LuxR family transcriptional regulator |
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| Protein accession | YP_001560716 |
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| Protein GI | 160881748 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG2197] Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.00295856 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGAATACCA AATATAAAGT ACTGCTTGTA GATGACGAAA CTCTTTTATT AGAGAGCTTA
GAAATCATTC TAACCTTATC AGAAGAATAT GAGATCGTCG GCAAAGCCCG CAATGGTTTG
GAAGCCCTAG AATGTATCAA TCATATTGTG CCTGACTTGG CTATGATTGA CCTTAACATG
GAGACGATTG GTGGGCTTGA ATTAATACGA AATATCCGAA ACCAGTATGA TTCTATGAAA
ATTTTAGTAC TAACAACCTT TTATGATGAA AGAAATATTA CTCTAGCTAT GCAATATGGA
GCAAATGGTT ATTTATTGAA AGATTCCGGA CGTAATGCGA TTCTTACCGC ACTATTAAAT
ATCCGAAATG GTCAAAGCGT AATTGACCAG AAAGTATTAG AAACCTTGAC CAAGCTAATC
TCTGATAAGA AGTCTTCAAA AAAATCAAAC ACGATAGCTT CTTTAACAAA TTTGGATTCA
CCTCAAAACA TAATACTCCC ACTTTCAGAG TTAACCAAGA GAGAGCATGA AATATGTGCA
ATGATAGCAG AAGGTTTTAC TAACTCACAA ATTGCAAGTT TTCTCTATAT ATCAGAAGGA
ACCGTAAAAA ACTATATCTC TTCTATCTAT GATAAATTAC AGATTCATGA CCGTGCTGCT
CTTGCCGTCG CACTAACCAA GACTAACAGA ATAATTTAA
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| Protein sequence | MNTKYKVLLV DDETLLLESL EIILTLSEEY EIVGKARNGL EALECINHIV PDLAMIDLNM
ETIGGLELIR NIRNQYDSMK ILVLTTFYDE RNITLAMQYG ANGYLLKDSG RNAILTALLN
IRNGQSVIDQ KVLETLTKLI SDKKSSKKSN TIASLTNLDS PQNIILPLSE LTKREHEICA
MIAEGFTNSQ IASFLYISEG TVKNYISSIY DKLQIHDRAA LAVALTKTNR II
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