Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cphy_3630 |
Symbol | |
ID | 5742654 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Clostridium phytofermentans ISDg |
Kingdom | Bacteria |
Replicon accession | NC_010001 |
Strand | + |
Start bp | 4481009 |
End bp | 4481707 |
Gene Length | 699 bp |
Protein Length | 232 aa |
Translation table | 11 |
GC content | 35% |
IMG OID | 641294740 |
Product | two component LuxR family transcriptional regulator |
Protein accession | YP_001560716 |
Protein GI | 160881748 |
COG category | [K] Transcription [T] Signal transduction mechanisms |
COG ID | [COG2197] Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 0.00295856 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAATACCA AATATAAAGT ACTGCTTGTA GATGACGAAA CTCTTTTATT AGAGAGCTTA GAAATCATTC TAACCTTATC AGAAGAATAT GAGATCGTCG GCAAAGCCCG CAATGGTTTG GAAGCCCTAG AATGTATCAA TCATATTGTG CCTGACTTGG CTATGATTGA CCTTAACATG GAGACGATTG GTGGGCTTGA ATTAATACGA AATATCCGAA ACCAGTATGA TTCTATGAAA ATTTTAGTAC TAACAACCTT TTATGATGAA AGAAATATTA CTCTAGCTAT GCAATATGGA GCAAATGGTT ATTTATTGAA AGATTCCGGA CGTAATGCGA TTCTTACCGC ACTATTAAAT ATCCGAAATG GTCAAAGCGT AATTGACCAG AAAGTATTAG AAACCTTGAC CAAGCTAATC TCTGATAAGA AGTCTTCAAA AAAATCAAAC ACGATAGCTT CTTTAACAAA TTTGGATTCA CCTCAAAACA TAATACTCCC ACTTTCAGAG TTAACCAAGA GAGAGCATGA AATATGTGCA ATGATAGCAG AAGGTTTTAC TAACTCACAA ATTGCAAGTT TTCTCTATAT ATCAGAAGGA ACCGTAAAAA ACTATATCTC TTCTATCTAT GATAAATTAC AGATTCATGA CCGTGCTGCT CTTGCCGTCG CACTAACCAA GACTAACAGA ATAATTTAA
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Protein sequence | MNTKYKVLLV DDETLLLESL EIILTLSEEY EIVGKARNGL EALECINHIV PDLAMIDLNM ETIGGLELIR NIRNQYDSMK ILVLTTFYDE RNITLAMQYG ANGYLLKDSG RNAILTALLN IRNGQSVIDQ KVLETLTKLI SDKKSSKKSN TIASLTNLDS PQNIILPLSE LTKREHEICA MIAEGFTNSQ IASFLYISEG TVKNYISSIY DKLQIHDRAA LAVALTKTNR II
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