More than 300 homologs were found in PanDaTox collection
for query gene VC0395_1019 on replicon NC_009456
Organism: Vibrio cholerae O395



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_009456  VC0395_1019  putative response regulator  100 
 
 
522 aa  1079    Vibrio cholerae O395  Bacteria  normal  n/a   
 
 
-
 
NC_009997  Sbal195_3014  response regulator receiver modulated metal dependent phosphohydrolase  42.77 
 
 
513 aa  420  1e-116  Shewanella baltica OS195  Bacteria  normal  normal  0.152382 
 
 
-
 
NC_011663  Sbal223_1491  response regulator receiver modulated metal dependent phosphohydrolase  42.77 
 
 
513 aa  421  1e-116  Shewanella baltica OS223  Bacteria  normal  0.0411849  normal  0.405552 
 
 
-
 
NC_009665  Shew185_2885  response regulator receiver modulated metal dependent phosphohydrolase  42.77 
 
 
513 aa  420  1e-116  Shewanella baltica OS185  Bacteria  normal  n/a   
 
 
-
 
NC_007954  Sden_2546  metal-dependent phosphohydrolase  42.5 
 
 
515 aa  419  1e-116  Shewanella denitrificans OS217  Bacteria  normal  n/a   
 
 
-
 
NC_009052  Sbal_2868  response regulator receiver modulated metal dependent phosphohydrolase  42.77 
 
 
513 aa  419  1e-116  Shewanella baltica OS155  Bacteria  normal  n/a   
 
 
-
 
NC_008345  Sfri_2755  response regulator receiver modulated metal dependent phosphohydrolase  42.33 
 
 
520 aa  419  1e-116  Shewanella frigidimarina NCIMB 400  Bacteria  normal  n/a   
 
 
-
 
NC_010506  Swoo_2427  response regulator receiver modulated metal dependent phosphohydrolase  41.49 
 
 
521 aa  412  1e-114  Shewanella woodyi ATCC 51908  Bacteria  normal  0.219655  hitchhiker  0.000118537 
 
 
-
 
NC_009665  Shew185_2172  response regulator receiver modulated metal dependent phosphohydrolase  40.78 
 
 
523 aa  413  1e-114  Shewanella baltica OS185  Bacteria  normal  0.0465103  n/a   
 
 
-
 
NC_011663  Sbal223_2212  response regulator receiver modulated metal dependent phosphohydrolase  40.59 
 
 
523 aa  410  1e-113  Shewanella baltica OS223  Bacteria  normal  0.16257  normal  0.683218 
 
 
-
 
NC_004347  SO_2366  response regulator  40.08 
 
 
525 aa  412  1e-113  Shewanella oneidensis MR-1  Bacteria  n/a    n/a   
 
 
-
 
NC_009997  Sbal195_2222  response regulator receiver modulated metal dependent phosphohydrolase  40.78 
 
 
523 aa  412  1e-113  Shewanella baltica OS195  Bacteria  normal  0.151758  normal  0.307874 
 
 
-
 
NC_008577  Shewana3_2105  response regulator receiver modulated metal dependent phosphohydrolase  39.66 
 
 
525 aa  410  1e-113  Shewanella sp. ANA-3  Bacteria  hitchhiker  0.00173233  normal  0.407049 
 
 
-
 
NC_009035  Sbal_4485  hypothetical protein  40.39 
 
 
523 aa  408  1.0000000000000001e-112  Shewanella baltica OS155  Bacteria  n/a    n/a   
 
 
-
 
NC_009052  Sbal_2199  response regulator receiver modulated metal dependent phosphohydrolase  40.39 
 
 
523 aa  408  1.0000000000000001e-112  Shewanella baltica OS155  Bacteria  normal  0.179718  n/a   
 
 
-
 
NC_008321  Shewmr4_2004  response regulator receiver modulated metal dependent phosphohydrolase  40.51 
 
 
525 aa  407  1.0000000000000001e-112  Shewanella sp. MR-4  Bacteria  normal  0.0562345  hitchhiker  0.000000282251 
 
 
-
 
NC_008322  Shewmr7_1971  response regulator receiver modulated metal dependent phosphohydrolase  40.51 
 
 
525 aa  407  1.0000000000000001e-112  Shewanella sp. MR-7  Bacteria  normal  0.0825869  normal  0.0109864 
 
 
-
 
NC_008700  Sama_1789  response regulator receiver protein  40.76 
 
 
524 aa  408  1.0000000000000001e-112  Shewanella amazonensis SB2B  Bacteria  normal  0.0101023  normal  0.210198 
 
 
-
 
NC_011138  MADE_01215  Response regulator  42.45 
 
 
509 aa  402  1e-111  Alteromonas macleodii 'Deep ecotype'  Bacteria  normal  0.204793  n/a   
 
 
-
 
NC_007954  Sden_1853  metal-dependent phosphohydrolase  41.11 
 
 
527 aa  403  1e-111  Shewanella denitrificans OS217  Bacteria  normal  0.0219327  n/a   
 
 
-
 
NC_013173  Dbac_0491  response regulator receiver modulated metal dependent phosphohydrolase  40.04 
 
 
522 aa  403  1e-111  Desulfomicrobium baculatum DSM 4028  Bacteria  normal  0.165576  n/a   
 
 
-
 
NC_007519  Dde_3114  metal dependent phosphohydrolase  42.68 
 
 
523 aa  400  9.999999999999999e-111  Desulfovibrio desulfuricans subsp. desulfuricans str. G20  Bacteria  hitchhiker  0.00390297  n/a   
 
 
-
 
NC_008751  Dvul_2247  response regulator receiver modulated metal dependent phosphohydrolase  41.7 
 
 
518 aa  400  9.999999999999999e-111  Desulfovibrio vulgaris DP4  Bacteria  normal  0.77168  normal 
 
 
-
 
NC_009092  Shew_1983  response regulator receiver modulated metal dependent phosphohydrolase  38.87 
 
 
523 aa  395  1e-109  Shewanella loihica PV-4  Bacteria  hitchhiker  0.00722808  normal 
 
 
-
 
NC_009831  Ssed_2209  response regulator receiver modulated metal dependent phosphohydrolase  39.45 
 
 
526 aa  395  1e-108  Shewanella sediminis HAW-EB3  Bacteria  normal  0.195398  normal 
 
 
-
 
NC_009831  Ssed_1780  response regulator receiver modulated metal dependent phosphohydrolase  40.41 
 
 
525 aa  389  1e-107  Shewanella sediminis HAW-EB3  Bacteria  normal  0.33037  normal 
 
 
-
 
NC_013173  Dbac_0215  response regulator receiver modulated metal dependent phosphohydrolase  42.21 
 
 
536 aa  386  1e-106  Desulfomicrobium baculatum DSM 4028  Bacteria  normal  n/a   
 
 
-
 
NC_013173  Dbac_0493  response regulator receiver modulated metal dependent phosphohydrolase  41.52 
 
 
531 aa  375  1e-102  Desulfomicrobium baculatum DSM 4028  Bacteria  normal  0.366798  n/a   
 
 
-
 
NC_013173  Dbac_0492  response regulator receiver modulated metal dependent phosphohydrolase  42.12 
 
 
508 aa  360  3e-98  Desulfomicrobium baculatum DSM 4028  Bacteria  normal  0.0844408  n/a   
 
 
-
 
NC_011138  MADE_02571  response regulator  37.33 
 
 
521 aa  333  4e-90  Alteromonas macleodii 'Deep ecotype'  Bacteria  normal  n/a   
 
 
-
 
NC_009438  Sputcn32_1988  response regulator receiver modulated metal dependent phosphohydrolase  42.4 
 
 
437 aa  331  2e-89  Shewanella putrefaciens CN-32  Bacteria  normal  n/a   
 
 
-
 
NC_008576  Mmc1_1813  response regulator receiver modulated metal dependent phosphohydrolase  35.77 
 
 
512 aa  314  1.9999999999999998e-84  Magnetococcus sp. MC-1  Bacteria  normal  0.0479529  normal  0.434013 
 
 
-
 
NC_008228  Patl_2561  response regulator receiver modulated metal dependent phosphohydrolase  35.24 
 
 
517 aa  310  5e-83  Pseudoalteromonas atlantica T6c  Bacteria  hitchhiker  0.00356747  n/a   
 
 
-
 
NC_009718  Fnod_1705  response regulator receiver modulated metal dependent phosphohydrolase  34.99 
 
 
471 aa  305  1.0000000000000001e-81  Fervidobacterium nodosum Rt17-B1  Bacteria  normal  n/a   
 
 
-
 
NC_009052  Sbal_2012  response regulator receiver modulated metal dependent phosphohydrolase  35.41 
 
 
531 aa  293  6e-78  Shewanella baltica OS155  Bacteria  normal  0.0999069  n/a   
 
 
-
 
NC_009052  Sbal_3786  response regulator receiver modulated metal dependent phosphohydrolase  34.8 
 
 
529 aa  290  4e-77  Shewanella baltica OS155  Bacteria  normal  n/a   
 
 
-
 
NC_009616  Tmel_0497  response regulator receiver modulated metal dependent phosphohydrolase  34.58 
 
 
432 aa  281  2e-74  Thermosipho melanesiensis BI429  Bacteria  normal  n/a   
 
 
-
 
NC_009718  Fnod_1101  response regulator receiver modulated metal dependent phosphohydrolase  33.05 
 
 
450 aa  249  1e-64  Fervidobacterium nodosum Rt17-B1  Bacteria  normal  n/a   
 
 
-
 
NC_008709  Ping_0306  metal dependent phosphohydrolase  52.91 
 
 
361 aa  224  3e-57  Psychromonas ingrahamii 37  Bacteria  normal  normal 
 
 
-
 
NC_009997  Sbal195_0871  response regulator receiver modulated metal dependent phosphohydrolase  53.61 
 
 
338 aa  216  9.999999999999999e-55  Shewanella baltica OS195  Bacteria  normal  normal 
 
 
-
 
NC_009438  Sputcn32_3141  response regulator receiver modulated metal dependent phosphohydrolase  52.58 
 
 
338 aa  214  1.9999999999999998e-54  Shewanella putrefaciens CN-32  Bacteria  normal  n/a   
 
 
-
 
NC_009665  Shew185_0836  response regulator receiver modulated metal dependent phosphohydrolase  53.61 
 
 
338 aa  215  1.9999999999999998e-54  Shewanella baltica OS185  Bacteria  normal  n/a   
 
 
-
 
NC_011663  Sbal223_0859  response regulator receiver modulated metal dependent phosphohydrolase  53.61 
 
 
338 aa  215  1.9999999999999998e-54  Shewanella baltica OS223  Bacteria  normal  normal 
 
 
-
 
NC_009052  Sbal_3504  response regulator receiver modulated metal dependent phosphohydrolase  53.61 
 
 
338 aa  215  1.9999999999999998e-54  Shewanella baltica OS155  Bacteria  normal  n/a   
 
 
-
 
NC_008577  Shewana3_3418  response regulator receiver modulated metal dependent phosphohydrolase  52.06 
 
 
338 aa  214  3.9999999999999995e-54  Shewanella sp. ANA-3  Bacteria  normal  normal 
 
 
-
 
NC_008321  Shewmr4_0716  response regulator receiver modulated metal dependent phosphohydrolase  52.06 
 
 
338 aa  213  9e-54  Shewanella sp. MR-4  Bacteria  normal  normal 
 
 
-
 
NC_008322  Shewmr7_3306  response regulator receiver modulated metal dependent phosphohydrolase  52.06 
 
 
338 aa  213  9e-54  Shewanella sp. MR-7  Bacteria  normal  normal 
 
 
-
 
NC_004347  SO_0860  response regulator  51.53 
 
 
339 aa  209  7e-53  Shewanella oneidensis MR-1  Bacteria  n/a    n/a   
 
 
-
 
NC_011138  MADE_01756  Response regulator CheB (receptor modification enzyme, protein-glutamate methylesterase)  48 
 
 
337 aa  204  2e-51  Alteromonas macleodii 'Deep ecotype'  Bacteria  normal  0.844049  n/a   
 
 
-
 
NC_008321  Shewmr4_0792  response regulator receiver modulated metal dependent phosphohydrolase  47.42 
 
 
331 aa  204  3e-51  Shewanella sp. MR-4  Bacteria  normal  normal 
 
 
-
 
NC_008322  Shewmr7_3231  response regulator receiver modulated metal dependent phosphohydrolase  47.42 
 
 
331 aa  204  3e-51  Shewanella sp. MR-7  Bacteria  normal  normal 
 
 
-
 
NC_008345  Sfri_2505  response regulator receiver modulated metal dependent phosphohydrolase  50.52 
 
 
331 aa  204  3e-51  Shewanella frigidimarina NCIMB 400  Bacteria  normal  n/a   
 
 
-
 
NC_008700  Sama_3111  response regulator receiver protein  47.74 
 
 
328 aa  201  1.9999999999999998e-50  Shewanella amazonensis SB2B  Bacteria  normal  normal  0.0637882 
 
 
-
 
NC_008577  Shewana3_3334  response regulator receiver modulated metal dependent phosphohydrolase  46.91 
 
 
331 aa  201  3e-50  Shewanella sp. ANA-3  Bacteria  normal  normal 
 
 
-
 
NC_008228  Patl_2248  response regulator receiver modulated metal dependent phosphohydrolase  47.94 
 
 
331 aa  199  9e-50  Pseudoalteromonas atlantica T6c  Bacteria  normal  n/a   
 
 
-
 
NC_007643  Rru_A0131  response regulator receiver (CheY) and unknown domain-containing protein  36.45 
 
 
337 aa  199  1.0000000000000001e-49  Rhodospirillum rubrum ATCC 11170  Bacteria  normal  n/a   
 
 
-
 
NC_007954  Sden_3723  response regulator receiver  47.24 
 
 
338 aa  198  2.0000000000000003e-49  Shewanella denitrificans OS217  Bacteria  normal  n/a   
 
 
-
 
NC_007520  Tcr_2179  response regulator receiver (CheY-like) modulated metal dependent phosphohydrolase  47.18 
 
 
348 aa  194  3e-48  Thiomicrospira crunogena XCL-2  Bacteria  normal  0.378064  n/a   
 
 
-
 
NC_008700  Sama_2951  response regulator receiver protein  46.91 
 
 
340 aa  194  4e-48  Shewanella amazonensis SB2B  Bacteria  normal  normal  0.129077 
 
 
-
 
NC_009485  BBta_0711  response regulator receiver sensor signal transduction histidine kinase  35.97 
 
 
581 aa  192  8e-48  Bradyrhizobium sp. BTAi1  Bacteria  normal  normal 
 
 
-
 
NC_007520  Tcr_1911  response regulator receiver (CheY-like) modulated metal dependent phosphohydrolase  48.99 
 
 
268 aa  193  8e-48  Thiomicrospira crunogena XCL-2  Bacteria  normal  0.0445959  n/a   
 
 
-
 
NC_007954  Sden_0663  response regulator receiver  45.59 
 
 
340 aa  192  2e-47  Shewanella denitrificans OS217  Bacteria  normal  n/a   
 
 
-
 
NC_008740  Maqu_3676  response regulator receiver modulated metal dependent phosphohydrolase  49.45 
 
 
328 aa  191  2e-47  Marinobacter aquaeolei VT8  Bacteria  normal  n/a   
 
 
-
 
NC_009654  Mmwyl1_1086  response regulator receiver modulated metal dependent phosphohydrolase  45.36 
 
 
331 aa  191  2e-47  Marinomonas sp. MWYL1  Bacteria  normal  0.226857  hitchhiker  0.0000000112469 
 
 
-
 
NC_003910  CPS_4164  response regulator/phosphatase  50.56 
 
 
352 aa  191  2.9999999999999997e-47  Colwellia psychrerythraea 34H  Bacteria  normal  n/a   
 
 
-
 
NC_013216  Dtox_4196  response regulator receiver modulated metal dependent phosphohydrolase  46.39 
 
 
350 aa  191  2.9999999999999997e-47  Desulfotomaculum acetoxidans DSM 771  Bacteria  normal  normal 
 
 
-
 
NC_011004  Rpal_5276  response regulator receiver sensor signal transduction histidine kinase  37.22 
 
 
579 aa  191  4e-47  Rhodopseudomonas palustris TIE-1  Bacteria  normal  0.606728  n/a   
 
 
-
 
NC_007925  RPC_0095  response regulator receiver sensor signal transduction histidine kinase  35.76 
 
 
582 aa  190  7e-47  Rhodopseudomonas palustris BisB18  Bacteria  normal  normal 
 
 
-
 
NC_007958  RPD_4375  response regulator receiver sensor signal transduction histidine kinase  37.33 
 
 
550 aa  190  7e-47  Rhodopseudomonas palustris BisB5  Bacteria  normal  normal 
 
 
-
 
NC_009901  Spea_0629  response regulator receiver modulated metal dependent phosphohydrolase  48.45 
 
 
339 aa  189  8e-47  Shewanella pealeana ATCC 700345  Bacteria  normal  n/a   
 
 
-
 
NC_010002  Daci_6015  response regulator receiver modulated metal dependent phosphohydrolase  46.73 
 
 
333 aa  188  2e-46  Delftia acidovorans SPH-1  Bacteria  normal  normal 
 
 
-
 
NC_007298  Daro_2902  response regulator receiver  44.72 
 
 
350 aa  188  2e-46  Dechloromonas aromatica RCB  Bacteria  normal  0.1984  normal  0.246098 
 
 
-
 
NC_010506  Swoo_3313  response regulator receiver modulated metal dependent phosphohydrolase  42.34 
 
 
343 aa  187  5e-46  Shewanella woodyi ATCC 51908  Bacteria  normal  hitchhiker  0.00000482447 
 
 
-
 
NC_009092  Shew_3199  response regulator receiver modulated metal dependent phosphohydrolase  46.73 
 
 
339 aa  187  5e-46  Shewanella loihica PV-4  Bacteria  normal  normal 
 
 
-
 
NC_011138  MADE_03585  response regulator/GGDEF/EAL domain protein  35.55 
 
 
741 aa  186  6e-46  Alteromonas macleodii 'Deep ecotype'  Bacteria  normal  n/a   
 
 
-
 
NC_008576  Mmc1_3408  response regulator receiver modulated metal dependent phosphohydrolase  44.85 
 
 
346 aa  187  6e-46  Magnetococcus sp. MC-1  Bacteria  normal  normal 
 
 
-
 
NC_011989  Avi_4319  Metal dependent phosphohydrolase with a response regulator receiver protein  41.45 
 
 
382 aa  186  7e-46  Agrobacterium vitis S4  Bacteria  normal  n/a   
 
 
-
 
NC_007778  RPB_4666  response regulator receiver sensor signal transduction histidine kinase  35.71 
 
 
578 aa  186  8e-46  Rhodopseudomonas palustris HaA2  Bacteria  normal  normal 
 
 
-
 
NC_011004  Rpal_0148  response regulator receiver modulated metal dependent phosphohydrolase  48.44 
 
 
385 aa  185  2.0000000000000003e-45  Rhodopseudomonas palustris TIE-1  Bacteria  normal  0.750781  n/a   
 
 
-
 
NC_007406  Nwi_3058  phage head-tail adaptor, putative  35.53 
 
 
580 aa  184  3e-45  Nitrobacter winogradskyi Nb-255  Bacteria  decreased coverage  0.00943131  normal  0.0427518 
 
 
-
 
NC_010172  Mext_2117  histidine kinase  37.24 
 
 
631 aa  184  3e-45  Methylobacterium extorquens PA1  Bacteria  normal  normal  0.0208634 
 
 
-
 
NC_010681  Bphyt_0187  response regulator receiver modulated metal dependent phosphohydrolase  44.22 
 
 
354 aa  184  5.0000000000000004e-45  Burkholderia phytofirmans PsJN  Bacteria  normal  normal  0.0125166 
 
 
-
 
NC_011757  Mchl_2394  response regulator receiver sensor signal transduction histidine kinase  37.24 
 
 
593 aa  184  5.0000000000000004e-45  Methylobacterium chloromethanicum CM4  Bacteria  normal  normal 
 
 
-
 
NC_010172  Mext_4449  metal-dependent phosphohydrolase  48.13 
 
 
358 aa  183  8.000000000000001e-45  Methylobacterium extorquens PA1  Bacteria  normal  normal  0.508967 
 
 
-
 
NC_011757  Mchl_4913  response regulator receiver modulated metal dependent phosphohydrolase  48.13 
 
 
354 aa  182  9.000000000000001e-45  Methylobacterium chloromethanicum CM4  Bacteria  normal  0.478904  normal  0.760596 
 
 
-
 
NC_007298  Daro_0007  response regulator receiver modulated metal dependent phosphohydrolase  44.33 
 
 
379 aa  182  1e-44  Dechloromonas aromatica RCB  Bacteria  normal  0.829613  normal  0.0284762 
 
 
-
 
NC_010725  Mpop_4963  response regulator receiver modulated metal dependent phosphohydrolase  47.59 
 
 
350 aa  182  1e-44  Methylobacterium populi BJ001  Bacteria  normal  0.102256  normal  0.0892849 
 
 
-
 
NC_009654  Mmwyl1_0356  response regulator receiver modulated metal dependent phosphohydrolase  45.45 
 
 
360 aa  182  1e-44  Marinomonas sp. MWYL1  Bacteria  normal  normal 
 
 
-
 
NC_009831  Ssed_3915  response regulator receiver modulated metal dependent phosphohydrolase  44.72 
 
 
356 aa  182  2e-44  Shewanella sediminis HAW-EB3  Bacteria  normal  normal 
 
 
-
 
NC_013173  Dbac_2138  metal dependent phosphohydrolase  42.45 
 
 
606 aa  182  2e-44  Desulfomicrobium baculatum DSM 4028  Bacteria  normal  0.258694  n/a   
 
 
-
 
NC_011757  Mchl_0150  response regulator receiver modulated metal dependent phosphohydrolase  40.83 
 
 
369 aa  181  2e-44  Methylobacterium chloromethanicum CM4  Bacteria  normal  normal  0.245203 
 
 
-
 
NC_008576  Mmc1_3165  response regulator receiver modulated metal dependent phosphohydrolase  46.32 
 
 
367 aa  182  2e-44  Magnetococcus sp. MC-1  Bacteria  normal  0.0569095  normal  0.0154692 
 
 
-
 
NC_010172  Mext_0206  metal-dependent phosphohydrolase  40.83 
 
 
369 aa  181  2e-44  Methylobacterium extorquens PA1  Bacteria  normal  0.44114  normal  0.760724 
 
 
-
 
NC_010511  M446_0838  response regulator receiver modulated metal dependent phosphohydrolase  38.63 
 
 
378 aa  181  2.9999999999999997e-44  Methylobacterium sp. 4-46  Bacteria  normal  0.8404  normal 
 
 
-
 
NC_010814  Glov_3523  response regulator receiver modulated metal dependent phosphohydrolase  44 
 
 
363 aa  181  4e-44  Geobacter lovleyi SZ  Bacteria  normal  n/a   
 
 
-
 
NC_008228  Patl_4035  response regulator receiver modulated diguanylate cyclase/phosphodiesterase  33.44 
 
 
746 aa  181  4e-44  Pseudoalteromonas atlantica T6c  Bacteria  normal  0.398097  n/a   
 
 
-
 
NC_011662  Tmz1t_1183  response regulator receiver modulated metal dependent phosphohydrolase  42.71 
 
 
363 aa  180  4.999999999999999e-44  Thauera sp. MZ1T  Bacteria  normal  n/a   
 
 
-
 
NC_012560  Avin_25160  response regulator  43.81 
 
 
356 aa  179  8e-44  Azotobacter vinelandii DJ  Bacteria  normal  n/a   
 
 
-
 
NC_007964  Nham_3684  response regulator receiver sensor signal transduction histidine kinase  34.49 
 
 
580 aa  179  9e-44  Nitrobacter hamburgensis X14  Bacteria  normal  0.896547  n/a   
 
 
-
 
NC_003910  CPS_0394  response regulator/GGDEF/EAL domain-containing protein  33.54 
 
 
740 aa  179  1e-43  Colwellia psychrerythraea 34H  Bacteria  normal  0.273558  n/a   
 
 
-
 
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