More than 300 homologs were found in PanDaTox collection
for query gene Tbis_1877 on replicon NC_014165
Organism: Thermobispora bispora DSM 43833



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_014165  Tbis_1877  cell envelope-related transcriptional attenuator  100 
 
 
539 aa  1090    Thermobispora bispora DSM 43833  Bacteria  normal  normal  0.801543 
 
 
-
 
NC_013595  Sros_3414  Transcriptional regulator-like protein  56.75 
 
 
609 aa  548  1e-154  Streptosporangium roseum DSM 43021  Bacteria  normal  0.442542  normal  0.390313 
 
 
-
 
NC_013595  Sros_6456  Transcriptional regulator-like protein  49.32 
 
 
543 aa  432  1e-120  Streptosporangium roseum DSM 43021  Bacteria  normal  hitchhiker  0.00855962 
 
 
-
 
NC_014165  Tbis_2169  cell envelope-related transcriptional attenuator  48 
 
 
504 aa  372  1e-102  Thermobispora bispora DSM 43833  Bacteria  normal  0.188939  normal 
 
 
-
 
NC_013510  Tcur_2629  cell envelope-related transcriptional attenuator  44.16 
 
 
496 aa  322  9.999999999999999e-87  Thermomonospora curvata DSM 43183  Bacteria  hitchhiker  0.00000175757  n/a   
 
 
-
 
NC_013595  Sros_9275  Transcriptional regulator-like protein  41.56 
 
 
457 aa  303  5.000000000000001e-81  Streptosporangium roseum DSM 43021  Bacteria  normal  normal 
 
 
-
 
NC_007333  Tfu_0017  cell envelope-related transcriptional attenuator  39.52 
 
 
472 aa  302  9e-81  Thermobifida fusca YX  Bacteria  hitchhiker  0.00643877  n/a   
 
 
-
 
NC_007333  Tfu_1372  cell envelope-related transcriptional attenuator  38.4 
 
 
490 aa  299  1e-79  Thermobifida fusca YX  Bacteria  normal  n/a   
 
 
-
 
NC_014210  Ndas_1419  cell envelope-related transcriptional attenuator  37.76 
 
 
511 aa  293  5e-78  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  0.327426  normal 
 
 
-
 
NC_013172  Bfae_09180  cell envelope-related function transcriptional attenuator common domain  35.65 
 
 
791 aa  240  5e-62  Brachybacterium faecium DSM 4810  Bacteria  normal  n/a   
 
 
-
 
NC_013169  Ksed_26120  cell envelope-related function transcriptional attenuator common domain protein  34.96 
 
 
497 aa  238  2e-61  Kytococcus sedentarius DSM 20547  Bacteria  normal  normal 
 
 
-
 
NC_008699  Noca_1398  cell envelope-related transcriptional attenuator  36.92 
 
 
481 aa  231  3e-59  Nocardioides sp. JS614  Bacteria  normal  n/a   
 
 
-
 
NC_008699  Noca_2614  cell envelope-related transcriptional attenuator  36.26 
 
 
508 aa  225  2e-57  Nocardioides sp. JS614  Bacteria  normal  0.235431  n/a   
 
 
-
 
NC_008541  Arth_1187  cell envelope-related transcriptional attenuator  33.67 
 
 
546 aa  205  2e-51  Arthrobacter sp. FB24  Bacteria  normal  0.208279  n/a   
 
 
-
 
NC_013757  Gobs_4982  cell envelope-related transcriptional attenuator  37.1 
 
 
523 aa  204  4e-51  Geodermatophilus obscurus DSM 43160  Bacteria  normal  n/a   
 
 
-
 
NC_011886  Achl_1258  cell envelope-related transcriptional attenuator  31.07 
 
 
549 aa  197  4.0000000000000005e-49  Arthrobacter chlorophenolicus A6  Bacteria  n/a    hitchhiker  0.0000000145407 
 
 
-
 
NC_012803  Mlut_05220  cell envelope-related function transcriptional attenuator common domain protein  36.39 
 
 
537 aa  176  8e-43  Micrococcus luteus NCTC 2665  Bacteria  normal  0.855799  n/a   
 
 
-
 
NC_013525  Tter_0570  cell envelope-related transcriptional attenuator  34.14 
 
 
377 aa  107  4e-22  Thermobaculum terrenum ATCC BAA-798  Bacteria  n/a    n/a   
 
 
-
 
NC_014210  Ndas_0934  cell envelope-related transcriptional attenuator  27.49 
 
 
480 aa  94.7  4e-18  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  normal  0.0202033 
 
 
-
 
NC_009767  Rcas_0369  cell envelope-related transcriptional attenuator  25.53 
 
 
356 aa  90.9  5e-17  Roseiflexus castenholzii DSM 13941  Bacteria  normal  0.117824  normal  0.3088 
 
 
-
 
NC_009972  Haur_1198  cell envelope-related transcriptional attenuator  30.29 
 
 
585 aa  90.9  5e-17  Herpetosiphon aurantiacus ATCC 23779  Bacteria  normal  n/a   
 
 
-
 
NC_008346  Swol_1921  cell envelope-related transcriptional attenuator  26.47 
 
 
406 aa  87.4  5e-16  Syntrophomonas wolfei subsp. wolfei str. Goettingen  Bacteria  normal  0.116318  n/a   
 
 
-
 
NC_012793  GWCH70_3046  cell envelope-related transcriptional attenuator  26.27 
 
 
322 aa  87.4  6e-16  Geobacillus sp. WCH70  Bacteria  normal  0.634845  n/a   
 
 
-
 
NC_007333  Tfu_2526  cell envelope-related transcriptional attenuator  24.3 
 
 
478 aa  86.3  0.000000000000001  Thermobifida fusca YX  Bacteria  normal  n/a   
 
 
-
 
NC_009523  RoseRS_0131  cell envelope-related transcriptional attenuator  27.66 
 
 
353 aa  86.7  0.000000000000001  Roseiflexus sp. RS-1  Bacteria  normal  0.763008  normal 
 
 
-
 
NC_011831  Cagg_3186  cell envelope-related transcriptional attenuator  32.82 
 
 
451 aa  82  0.00000000000002  Chloroflexus aggregans DSM 9485  Bacteria  normal  normal  0.689692 
 
 
-
 
NC_013757  Gobs_4335  cell envelope-related transcriptional attenuator  28.81 
 
 
521 aa  82  0.00000000000003  Geodermatophilus obscurus DSM 43160  Bacteria  normal  0.0591559  n/a   
 
 
-
 
NC_011899  Hore_13390  cell envelope-related transcriptional attenuator  28.04 
 
 
405 aa  81.6  0.00000000000003  Halothermothrix orenii H 168  Bacteria  normal  0.557039  n/a   
 
 
-
 
NC_009674  Bcer98_3735  cell envelope-related transcriptional attenuator  24.38 
 
 
383 aa  81.3  0.00000000000004  Bacillus cytotoxicus NVH 391-98  Bacteria  normal  n/a   
 
 
-
 
NC_013385  Adeg_1973  cell envelope-related transcriptional attenuator  26.54 
 
 
418 aa  79.7  0.0000000000001  Ammonifex degensii KC4  Bacteria  normal  0.554316  n/a   
 
 
-
 
NC_013522  Taci_0893  cell envelope-related transcriptional attenuator  28.73 
 
 
453 aa  79.3  0.0000000000002  Thermanaerovibrio acidaminovorans DSM 6589  Bacteria  normal  0.301121  n/a   
 
 
-
 
NC_013216  Dtox_4120  cell envelope-related transcriptional attenuator  27.67 
 
 
445 aa  79.3  0.0000000000002  Desulfotomaculum acetoxidans DSM 771  Bacteria  hitchhiker  0.0000955467  unclonable  0.000000000378568 
 
 
-
 
NC_009767  Rcas_0015  cell envelope-related transcriptional attenuator  31.38 
 
 
503 aa  78.6  0.0000000000002  Roseiflexus castenholzii DSM 13941  Bacteria  normal  0.0348648  hitchhiker  0.0000779954 
 
 
-
 
NC_009664  Krad_0030  cell envelope-related transcriptional attenuator  27.08 
 
 
506 aa  78.6  0.0000000000003  Kineococcus radiotolerans SRS30216  Bacteria  normal  normal  0.0770441 
 
 
-
 
NC_009767  Rcas_0287  cell envelope-related transcriptional attenuator  30.77 
 
 
412 aa  77.8  0.0000000000005  Roseiflexus castenholzii DSM 13941  Bacteria  normal  normal 
 
 
-
 
NC_004116  SAG0368  hypothetical protein  22.56 
 
 
435 aa  77  0.0000000000008  Streptococcus agalactiae 2603V/R  Bacteria  normal  n/a   
 
 
-
 
NC_008148  Rxyl_1540  cell envelope-related transcriptional attenuator  28.84 
 
 
328 aa  76.6  0.000000000001  Rubrobacter xylanophilus DSM 9941  Bacteria  normal  0.112437  n/a   
 
 
-
 
NC_007333  Tfu_2542  cell envelope-related transcriptional attenuator  26.51 
 
 
509 aa  75.5  0.000000000002  Thermobifida fusca YX  Bacteria  normal  n/a   
 
 
-
 
NC_014210  Ndas_0935  cell envelope-related transcriptional attenuator  23.29 
 
 
465 aa  75.5  0.000000000002  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  normal  0.0761113 
 
 
-
 
NC_013525  Tter_1433  cell envelope-related transcriptional attenuator  27.67 
 
 
332 aa  75.5  0.000000000002  Thermobaculum terrenum ATCC BAA-798  Bacteria  n/a    n/a   
 
 
-
 
NC_009253  Dred_3112  cell envelope-related transcriptional attenuator  26.03 
 
 
419 aa  75.5  0.000000000002  Desulfotomaculum reducens MI-1  Bacteria  normal  0.0132049  n/a   
 
 
-
 
NC_014165  Tbis_0717  cell envelope-related transcriptional attenuator  28.51 
 
 
504 aa  75.1  0.000000000003  Thermobispora bispora DSM 43833  Bacteria  normal  normal  0.0100935 
 
 
-
 
NC_014165  Tbis_3514  cell envelope-related transcriptional attenuator  28.09 
 
 
468 aa  75.1  0.000000000003  Thermobispora bispora DSM 43833  Bacteria  normal  normal 
 
 
-
 
NC_011658  BCAH187_A5364  transcription antiterminator, LytR family  24.86 
 
 
377 aa  74.3  0.000000000005  Bacillus cereus AH187  Bacteria  normal  n/a   
 
 
-
 
NC_011831  Cagg_1876  cell envelope-related transcriptional attenuator  26.12 
 
 
455 aa  74.3  0.000000000005  Chloroflexus aggregans DSM 9485  Bacteria  hitchhiker  0.000275813  normal 
 
 
-
 
NC_009767  Rcas_1996  cell envelope-related transcriptional attenuator  30.68 
 
 
527 aa  73.9  0.000000000006  Roseiflexus castenholzii DSM 13941  Bacteria  normal  normal  0.177975 
 
 
-
 
NC_013131  Caci_7618  cell envelope-related transcriptional attenuator  27.27 
 
 
643 aa  73.9  0.000000000007  Catenulispora acidiphila DSM 44928  Bacteria  normal  normal 
 
 
-
 
NC_013174  Jden_1864  cell envelope-related transcriptional attenuator  23.99 
 
 
391 aa  73.6  0.000000000009  Jonesia denitrificans DSM 20603  Bacteria  normal  0.383316  normal  0.036217 
 
 
-
 
NC_003909  BCE_5306  LytR family transcription antiterminator  26.72 
 
 
377 aa  73.6  0.000000000009  Bacillus cereus ATCC 10987  Bacteria  normal  n/a   
 
 
-
 
NC_014151  Cfla_2383  cell envelope-related transcriptional attenuator  25.51 
 
 
389 aa  73.6  0.000000000009  Cellulomonas flavigena DSM 20109  Bacteria  normal  0.0868762  hitchhiker  0.00772059 
 
 
-
 
NC_011725  BCB4264_A5387  membrane-bound transcriptional regulator LytR  26.29 
 
 
299 aa  73.6  0.000000000009  Bacillus cereus B4264  Bacteria  normal  n/a   
 
 
-
 
NC_013203  Apar_1295  cell envelope-related transcriptional attenuator  26.41 
 
 
407 aa  73.6  0.000000000009  Atopobium parvulum DSM 20469  Bacteria  normal  normal  0.865299 
 
 
-
 
NC_010184  BcerKBAB4_4992  cell envelope-related transcriptional attenuator  25.5 
 
 
374 aa  73.2  0.00000000001  Bacillus weihenstephanensis KBAB4  Bacteria  normal  n/a   
 
 
-
 
NC_011830  Dhaf_3430  cell envelope-related transcriptional attenuator  26.8 
 
 
439 aa  72.4  0.00000000002  Desulfitobacterium hafniense DCB-2  Bacteria  normal  0.0225853  n/a   
 
 
-
 
NC_007333  Tfu_2956  cell envelope-related transcriptional attenuator  24.79 
 
 
453 aa  72.4  0.00000000002  Thermobifida fusca YX  Bacteria  normal  0.482149  n/a   
 
 
-
 
NC_008312  Tery_2604  cell envelope-related transcriptional attenuator  27.39 
 
 
471 aa  72  0.00000000002  Trichodesmium erythraeum IMS101  Bacteria  normal  normal  0.22991 
 
 
-
 
NC_008527  LACR_0489  transcription regulator  25.3 
 
 
450 aa  72.8  0.00000000002  Lactococcus lactis subsp. cremoris SK11  Bacteria  normal  n/a   
 
 
-
 
NC_013521  Sked_08580  cell envelope-related function transcriptional attenuator common domain protein  26.19 
 
 
396 aa  71.6  0.00000000003  Sanguibacter keddieii DSM 10542  Bacteria  normal  0.783991  normal  0.393457 
 
 
-
 
NC_008699  Noca_0784  cell envelope-related transcriptional attenuator  25.71 
 
 
400 aa  71.6  0.00000000003  Nocardioides sp. JS614  Bacteria  normal  n/a   
 
 
-
 
NC_005945  BAS5047  LytR family transcription antiterminator  26.72 
 
 
375 aa  71.6  0.00000000004  Bacillus anthracis str. Sterne  Bacteria  normal  n/a   
 
 
-
 
NC_005957  BT9727_4877  LytR family transcriptional regulator  26.72 
 
 
375 aa  71.2  0.00000000004  Bacillus thuringiensis serovar konkukian str. 97-27  Bacteria  normal  n/a   
 
 
-
 
NC_006274  BCZK4892  LytR family transcriptional regulator  26.72 
 
 
375 aa  71.2  0.00000000004  Bacillus cereus E33L  Bacteria  normal  n/a   
 
 
-
 
NC_007530  GBAA_5432  LytR family transcription antiterminator  26.72 
 
 
375 aa  71.6  0.00000000004  Bacillus anthracis str. 'Ames Ancestor'  Bacteria  normal  n/a   
 
 
-
 
NC_009921  Franean1_1248  cell envelope-related transcriptional attenuator  26.88 
 
 
512 aa  71.2  0.00000000005  Frankia sp. EAN1pec  Bacteria  normal  0.375848  normal  0.0192244 
 
 
-
 
NC_013441  Gbro_3920  cell envelope-related function transcriptional attenuator, LytR/CpsA family  26.52 
 
 
734 aa  71.2  0.00000000005  Gordonia bronchialis DSM 43247  Bacteria  normal  n/a   
 
 
-
 
NC_011831  Cagg_3226  cell envelope-related transcriptional attenuator  29.39 
 
 
370 aa  71.2  0.00000000005  Chloroflexus aggregans DSM 9485  Bacteria  normal  normal  0.501586 
 
 
-
 
NC_009523  RoseRS_0249  cell envelope-related transcriptional attenuator  28.64 
 
 
461 aa  70.9  0.00000000005  Roseiflexus sp. RS-1  Bacteria  normal  0.176246  normal  0.0400211 
 
 
-
 
NC_013411  GYMC61_3243  cell envelope-related transcriptional attenuator  23.65 
 
 
335 aa  70.9  0.00000000006  Geobacillus sp. Y412MC61  Bacteria  n/a    n/a   
 
 
-
 
NC_008531  LEUM_0961  transcriptional regulator  26.19 
 
 
410 aa  70.9  0.00000000006  Leuconostoc mesenteroides subsp. mesenteroides ATCC 8293  Bacteria  normal  n/a   
 
 
-
 
NC_002976  SERP0932  transcriptional regulator, putative  26.61 
 
 
329 aa  70.5  0.00000000007  Staphylococcus epidermidis RP62A  Bacteria  normal  n/a   
 
 
-
 
NC_009523  RoseRS_4519  cell envelope-related transcriptional attenuator  29.29 
 
 
505 aa  70.5  0.00000000007  Roseiflexus sp. RS-1  Bacteria  normal  normal 
 
 
-
 
NC_013595  Sros_1348  Transcriptional regulator-like protein  28.95 
 
 
505 aa  70.5  0.00000000007  Streptosporangium roseum DSM 43021  Bacteria  normal  0.958942  normal 
 
 
-
 
NC_011831  Cagg_1700  cell envelope-related transcriptional attenuator  29.62 
 
 
463 aa  70.1  0.00000000009  Chloroflexus aggregans DSM 9485  Bacteria  normal  0.55383  normal 
 
 
-
 
NC_013595  Sros_0120  Transcriptional regulator-like protein  30.81 
 
 
326 aa  70.1  0.00000000009  Streptosporangium roseum DSM 43021  Bacteria  normal  0.224299  normal 
 
 
-
 
NC_013171  Apre_1005  cell envelope-related transcriptional attenuator  25.83 
 
 
285 aa  70.1  0.00000000009  Anaerococcus prevotii DSM 20548  Bacteria  normal  n/a   
 
 
-
 
NC_009674  Bcer98_1499  cell envelope-related transcriptional attenuator  24.68 
 
 
329 aa  70.1  0.00000000009  Bacillus cytotoxicus NVH 391-98  Bacteria  unclonable  0.000000186761  n/a   
 
 
-
 
NC_013510  Tcur_4114  cell envelope-related transcriptional attenuator  28.27 
 
 
549 aa  70.1  0.0000000001  Thermomonospora curvata DSM 43183  Bacteria  normal  n/a   
 
 
-
 
NC_013947  Snas_6386  cell envelope-related transcriptional attenuator  28.98 
 
 
382 aa  70.1  0.0000000001  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  normal 
 
 
-
 
NC_013595  Sros_9260  Transcriptional regulator-like protein  26.64 
 
 
481 aa  70.1  0.0000000001  Streptosporangium roseum DSM 43021  Bacteria  normal  normal  0.969868 
 
 
-
 
NC_009632  SaurJH1_1451  transcription attenuator LytR  27.23 
 
 
327 aa  69.3  0.0000000001  Staphylococcus aureus subsp. aureus JH1  Bacteria  normal  n/a   
 
 
-
 
NC_010424  Daud_2095  cell envelope-related transcriptional attenuator  24.17 
 
 
411 aa  69.7  0.0000000001  Candidatus Desulforudis audaxviator MP104C  Bacteria  normal  n/a   
 
 
-
 
NC_009487  SaurJH9_1423  cell envelope-related transcriptional attenuator  27.23 
 
 
327 aa  69.3  0.0000000001  Staphylococcus aureus subsp. aureus JH9  Bacteria  normal  0.302612  n/a   
 
 
-
 
NC_011830  Dhaf_4100  cell envelope-related transcriptional attenuator  24.69 
 
 
426 aa  69.3  0.0000000002  Desulfitobacterium hafniense DCB-2  Bacteria  unclonable  0.000000000000199964  n/a   
 
 
-
 
NC_013093  Amir_1037  cell envelope-related transcriptional attenuator  25.45 
 
 
732 aa  69.3  0.0000000002  Actinosynnema mirum DSM 43827  Bacteria  normal  n/a   
 
 
-
 
NC_008578  Acel_0412  cell envelope-related transcriptional attenuator  28.04 
 
 
491 aa  69.3  0.0000000002  Acidothermus cellulolyticus 11B  Bacteria  normal  0.245301  normal 
 
 
-
 
NC_011773  BCAH820_5288  transcription antiterminator, LytR family  26.61 
 
 
375 aa  69.3  0.0000000002  Bacillus cereus AH820  Bacteria  n/a    hitchhiker  0.00000000327862 
 
 
-
 
NC_007644  Moth_2366  cell envelope-related transcriptional attenuator  25.96 
 
 
319 aa  68.2  0.0000000004  Moorella thermoacetica ATCC 39073  Bacteria  hitchhiker  0.000000181907  unclonable  0.00000001 
 
 
-
 
NC_007777  Francci3_3496  cell envelope-related transcriptional attenuator  28.24 
 
 
486 aa  68.2  0.0000000004  Frankia sp. CcI3  Bacteria  normal  0.625789  normal  0.409021 
 
 
-
 
NC_013159  Svir_16350  cell envelope-related transcriptional attenuator  28.34 
 
 
307 aa  68.2  0.0000000004  Saccharomonospora viridis DSM 43017  Bacteria  normal  0.0716913  normal  0.935262 
 
 
-
 
NC_007777  Francci3_1558  cell envelope-related transcriptional attenuator  27.63 
 
 
545 aa  67.4  0.0000000006  Frankia sp. CcI3  Bacteria  normal  normal  0.931439 
 
 
-
 
NC_008532  STER_1071  transcriptional activator-exopolysaccharide biosynthesis  28.44 
 
 
486 aa  67.4  0.0000000006  Streptococcus thermophilus LMD-9  Bacteria  normal  0.903122  n/a   
 
 
-
 
NC_012669  Bcav_1166  cell envelope-related protein transcriptional attenuator  27.47 
 
 
395 aa  67.4  0.0000000007  Beutenbergia cavernae DSM 12333  Bacteria  normal  normal 
 
 
-
 
NC_009674  Bcer98_0803  cell envelope-related transcriptional attenuator  24.62 
 
 
317 aa  67  0.0000000009  Bacillus cytotoxicus NVH 391-98  Bacteria  normal  n/a   
 
 
-
 
NC_003909  BCE_2056  LytR family transcription antiterminator  23.56 
 
 
333 aa  66.6  0.000000001  Bacillus cereus ATCC 10987  Bacteria  hitchhiker  0.00905786  n/a   
 
 
-
 
NC_009513  Lreu_1057  cell envelope-related transcriptional attenuator  25.2 
 
 
333 aa  66.6  0.000000001  Lactobacillus reuteri DSM 20016  Bacteria  normal  0.0371332  n/a   
 
 
-
 
NC_013172  Bfae_30000  cell envelope-related function transcriptional attenuator common domain  27.96 
 
 
395 aa  66.2  0.000000001  Brachybacterium faecium DSM 4810  Bacteria  normal  n/a   
 
 
-
 
NC_005945  BAS1830  LytR family transcription antiterminator  23.56 
 
 
333 aa  65.9  0.000000002  Bacillus anthracis str. Sterne  Bacteria  normal  0.241912  n/a   
 
 
-
 
NC_011773  BCAH820_2008  transcription antiterminator, LytR family  23.56 
 
 
333 aa  65.9  0.000000002  Bacillus cereus AH820  Bacteria  n/a    hitchhiker  6.0610299999999994e-43 
 
 
-
 
NC_011772  BCG9842_B5640  transcription antiterminator, LytR family  25.43 
 
 
372 aa  65.5  0.000000002  Bacillus cereus G9842  Bacteria  normal  hitchhiker  0.00000000000247251 
 
 
-
 
NC_011725  BCB4264_A5319  transcription antiterminator, LytR family  26.29 
 
 
374 aa  65.9  0.000000002  Bacillus cereus B4264  Bacteria  normal  n/a   
 
 
-
 
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