More than 300 homologs were found in PanDaTox collection
for query gene Snas_1734 on replicon NC_013947
Organism: Stackebrandtia nassauensis DSM 44728



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_013947  Snas_1734  two component transcriptional regulator, LuxR family  100 
 
 
188 aa  377  1e-104  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  0.34281  normal 
 
 
-
 
NC_013595  Sros_6306  response regulator receiver protein  62.9 
 
 
209 aa  229  3e-59  Streptosporangium roseum DSM 43021  Bacteria  normal  0.0259699  normal  0.0492304 
 
 
-
 
NC_013510  Tcur_1300  two component transcriptional regulator, LuxR family  62.9 
 
 
215 aa  222  2e-57  Thermomonospora curvata DSM 43183  Bacteria  normal  0.145336  n/a   
 
 
-
 
NC_013159  Svir_39200  response regulator containing a CheY-like receiver domain protein and an HTH DNA-binding domain protein  61.08 
 
 
218 aa  221  4.9999999999999996e-57  Saccharomonospora viridis DSM 43017  Bacteria  normal  normal  0.254077 
 
 
-
 
NC_009664  Krad_2518  two component transcriptional regulator, LuxR family  63.83 
 
 
225 aa  217  8.999999999999998e-56  Kineococcus radiotolerans SRS30216  Bacteria  normal  normal 
 
 
-
 
NC_014211  Ndas_4872  two component transcriptional regulator, LuxR family  60.99 
 
 
232 aa  214  4e-55  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  0.247388  normal 
 
 
-
 
NC_013595  Sros_7377  response regulator receiver protein  62.7 
 
 
216 aa  206  1e-52  Streptosporangium roseum DSM 43021  Bacteria  normal  0.92051  normal 
 
 
-
 
NC_013947  Snas_0607  two component transcriptional regulator, LuxR family  58.2 
 
 
216 aa  204  4e-52  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  normal 
 
 
-
 
NC_013947  Snas_5550  two component transcriptional regulator, LuxR family  61.2 
 
 
213 aa  204  6e-52  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  0.159917  normal  0.0692801 
 
 
-
 
NC_013093  Amir_3004  two component transcriptional regulator, LuxR family  57.14 
 
 
223 aa  200  9.999999999999999e-51  Actinosynnema mirum DSM 43827  Bacteria  normal  0.0522265  n/a   
 
 
-
 
NC_013595  Sros_0609  response regulator receiver protein  55.91 
 
 
218 aa  195  4.0000000000000005e-49  Streptosporangium roseum DSM 43021  Bacteria  normal  normal 
 
 
-
 
NC_013739  Cwoe_0676  two component transcriptional regulator, LuxR family  57.38 
 
 
215 aa  194  6e-49  Conexibacter woesei DSM 14684  Bacteria  normal  normal 
 
 
-
 
NC_012669  Bcav_0404  two component transcriptional regulator, LuxR family  56.83 
 
 
218 aa  188  2.9999999999999997e-47  Beutenbergia cavernae DSM 12333  Bacteria  normal  0.0987348  normal 
 
 
-
 
NC_013093  Amir_4001  two component transcriptional regulator, LuxR family  53.19 
 
 
217 aa  184  8e-46  Actinosynnema mirum DSM 43827  Bacteria  normal  0.380782  n/a   
 
 
-
 
NC_013235  Namu_0544  two component transcriptional regulator, LuxR family  54.35 
 
 
215 aa  183  1.0000000000000001e-45  Nakamurella multipartita DSM 44233  Bacteria  normal  normal 
 
 
-
 
NC_013947  Snas_3639  two component transcriptional regulator, LuxR family  53.76 
 
 
215 aa  181  5.0000000000000004e-45  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  0.274763  normal 
 
 
-
 
NC_013595  Sros_8800  response regulator receiver protein  54.05 
 
 
215 aa  181  5.0000000000000004e-45  Streptosporangium roseum DSM 43021  Bacteria  normal  0.752334  normal 
 
 
-
 
NC_009921  Franean1_3846  two component LuxR family transcriptional regulator  55.14 
 
 
249 aa  180  8.000000000000001e-45  Frankia sp. EAN1pec  Bacteria  normal  0.525033  normal  0.770826 
 
 
-
 
NC_013510  Tcur_0110  two component transcriptional regulator, LuxR family  48.44 
 
 
222 aa  177  1e-43  Thermomonospora curvata DSM 43183  Bacteria  normal  n/a   
 
 
-
 
NC_014165  Tbis_1846  LuxR family two component transcriptional regulator  50.26 
 
 
226 aa  174  5e-43  Thermobispora bispora DSM 43833  Bacteria  normal  0.699471  normal 
 
 
-
 
NC_013947  Snas_2037  two component transcriptional regulator, LuxR family  47.92 
 
 
225 aa  173  9.999999999999999e-43  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  normal  0.137578 
 
 
-
 
NC_013093  Amir_3219  two component transcriptional regulator, LuxR family  51.61 
 
 
208 aa  171  5e-42  Actinosynnema mirum DSM 43827  Bacteria  normal  n/a   
 
 
-
 
NC_013510  Tcur_2302  two component transcriptional regulator, LuxR family  48.97 
 
 
226 aa  171  7.999999999999999e-42  Thermomonospora curvata DSM 43183  Bacteria  normal  0.0191252  n/a   
 
 
-
 
NC_013595  Sros_5905  response regulator receiver protein  48.45 
 
 
227 aa  170  1e-41  Streptosporangium roseum DSM 43021  Bacteria  normal  0.0252894  normal  0.145246 
 
 
-
 
NC_013947  Snas_4946  two component transcriptional regulator, LuxR family  46.56 
 
 
224 aa  166  1e-40  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  0.13115  normal 
 
 
-
 
NC_014210  Ndas_1972  two component transcriptional regulator, LuxR family  46.81 
 
 
217 aa  166  2e-40  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  unclonable  0.0000000794288  unclonable  0.0000000332591 
 
 
-
 
NC_014210  Ndas_3601  two component transcriptional regulator, LuxR family  48.69 
 
 
222 aa  165  2.9999999999999998e-40  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  0.324048  normal 
 
 
-
 
NC_014210  Ndas_2087  two component transcriptional regulator, LuxR family  47.31 
 
 
247 aa  165  2.9999999999999998e-40  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  0.73112  normal 
 
 
-
 
NC_008699  Noca_1020  response regulator receiver  47.34 
 
 
218 aa  165  4e-40  Nocardioides sp. JS614  Bacteria  normal  0.648692  n/a   
 
 
-
 
NC_014151  Cfla_0278  two component transcriptional regulator, LuxR family  44.68 
 
 
225 aa  164  5e-40  Cellulomonas flavigena DSM 20109  Bacteria  normal  hitchhiker  0.000789071 
 
 
-
 
NC_013530  Xcel_1619  two component transcriptional regulator, LuxR family  47.06 
 
 
234 aa  163  1.0000000000000001e-39  Xylanimonas cellulosilytica DSM 15894  Bacteria  normal  n/a   
 
 
-
 
NC_013739  Cwoe_4937  two component transcriptional regulator, LuxR family  49.21 
 
 
224 aa  164  1.0000000000000001e-39  Conexibacter woesei DSM 14684  Bacteria  normal  0.570807  normal  0.210467 
 
 
-
 
NC_013595  Sros_1523  response regulator receiver protein  46.84 
 
 
215 aa  163  2.0000000000000002e-39  Streptosporangium roseum DSM 43021  Bacteria  normal  0.894169  normal  0.0152488 
 
 
-
 
NC_013947  Snas_1740  two component transcriptional regulator, LuxR family  46.52 
 
 
228 aa  162  2.0000000000000002e-39  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  normal 
 
 
-
 
NC_013595  Sros_4468  response regulator receiver protein  45.7 
 
 
219 aa  161  5.0000000000000005e-39  Streptosporangium roseum DSM 43021  Bacteria  normal  0.0876299  normal  0.32237 
 
 
-
 
NC_013521  Sked_21600  response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain  44.68 
 
 
222 aa  160  7e-39  Sanguibacter keddieii DSM 10542  Bacteria  normal  0.49613  normal 
 
 
-
 
NC_013093  Amir_7009  two component transcriptional regulator, LuxR family  48.42 
 
 
218 aa  160  8.000000000000001e-39  Actinosynnema mirum DSM 43827  Bacteria  normal  0.0896567  n/a   
 
 
-
 
NC_013131  Caci_7105  two component transcriptional regulator, LuxR family  46.19 
 
 
241 aa  160  9e-39  Catenulispora acidiphila DSM 44928  Bacteria  normal  0.106023  normal  0.469545 
 
 
-
 
NC_009664  Krad_1981  two component transcriptional regulator, LuxR family  45.18 
 
 
230 aa  160  1e-38  Kineococcus radiotolerans SRS30216  Bacteria  normal  normal 
 
 
-
 
NC_013131  Caci_6963  two component transcriptional regulator, LuxR family  47.94 
 
 
225 aa  160  1e-38  Catenulispora acidiphila DSM 44928  Bacteria  normal  0.029709  normal 
 
 
-
 
NC_013510  Tcur_4491  two component transcriptional regulator, LuxR family  45.5 
 
 
225 aa  160  1e-38  Thermomonospora curvata DSM 43183  Bacteria  normal  n/a   
 
 
-
 
NC_013739  Cwoe_1616  two component transcriptional regulator, LuxR family  46.73 
 
 
229 aa  160  1e-38  Conexibacter woesei DSM 14684  Bacteria  normal  normal 
 
 
-
 
NC_013530  Xcel_1633  two component transcriptional regulator, LuxR family  47.62 
 
 
241 aa  160  1e-38  Xylanimonas cellulosilytica DSM 15894  Bacteria  normal  0.457155  n/a   
 
 
-
 
NC_009664  Krad_1198  two component transcriptional regulator, LuxR family  44.27 
 
 
225 aa  159  2e-38  Kineococcus radiotolerans SRS30216  Bacteria  normal  0.109916  normal  0.0247339 
 
 
-
 
NC_013947  Snas_2557  two component transcriptional regulator, LuxR family  45.74 
 
 
224 aa  158  4e-38  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  0.231398  normal  0.0978001 
 
 
-
 
NC_013521  Sked_03540  response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain  45.96 
 
 
226 aa  158  5e-38  Sanguibacter keddieii DSM 10542  Bacteria  normal  normal 
 
 
-
 
NC_013739  Cwoe_1269  two component transcriptional regulator, LuxR family  46.56 
 
 
226 aa  157  8e-38  Conexibacter woesei DSM 14684  Bacteria  normal  hitchhiker  0.00432991 
 
 
-
 
NC_013947  Snas_3359  two component transcriptional regulator, LuxR family  44.09 
 
 
219 aa  157  8e-38  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  0.0172663  normal 
 
 
-
 
NC_013947  Snas_5644  two component transcriptional regulator, LuxR family  48.17 
 
 
225 aa  157  1e-37  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  normal  0.114252 
 
 
-
 
NC_009380  Strop_1796  response regulator receiver  47.69 
 
 
230 aa  157  1e-37  Salinispora tropica CNB-440  Bacteria  normal  normal 
 
 
-
 
NC_013595  Sros_5304  response regulator receiver protein  46.6 
 
 
220 aa  157  1e-37  Streptosporangium roseum DSM 43021  Bacteria  normal  0.128918  normal 
 
 
-
 
NC_009953  Sare_1782  two component LuxR family transcriptional regulator  48.21 
 
 
230 aa  157  1e-37  Salinispora arenicola CNS-205  Bacteria  normal  hitchhiker  0.0025253 
 
 
-
 
NC_013947  Snas_0645  two component transcriptional regulator, LuxR family  46.6 
 
 
220 aa  156  1e-37  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  0.691779  normal 
 
 
-
 
NC_012669  Bcav_0102  two component transcriptional regulator, LuxR family  47.64 
 
 
221 aa  157  1e-37  Beutenbergia cavernae DSM 12333  Bacteria  normal  0.0637251  normal 
 
 
-
 
NC_013739  Cwoe_0262  two component transcriptional regulator, LuxR family  44.44 
 
 
225 aa  155  2e-37  Conexibacter woesei DSM 14684  Bacteria  normal  0.0721339  normal  0.623073 
 
 
-
 
NC_013204  Elen_2822  two component transcriptional regulator, LuxR family  44.85 
 
 
228 aa  156  2e-37  Eggerthella lenta DSM 2243  Bacteria  normal  0.0415698  normal  0.590713 
 
 
-
 
NC_012669  Bcav_1731  two component transcriptional regulator, LuxR family  44.32 
 
 
224 aa  155  2e-37  Beutenbergia cavernae DSM 12333  Bacteria  normal  0.550315  normal 
 
 
-
 
NC_012669  Bcav_2449  two component transcriptional regulator, LuxR family  49.12 
 
 
220 aa  156  2e-37  Beutenbergia cavernae DSM 12333  Bacteria  normal  0.729355  normal 
 
 
-
 
NC_013595  Sros_8243  response regulator receiver protein  47.34 
 
 
217 aa  155  3e-37  Streptosporangium roseum DSM 43021  Bacteria  normal  0.931194  normal  0.230681 
 
 
-
 
NC_009664  Krad_4217  two component transcriptional regulator, LuxR family  46.39 
 
 
225 aa  155  3e-37  Kineococcus radiotolerans SRS30216  Bacteria  decreased coverage  0.000816589  normal  0.757819 
 
 
-
 
NC_013739  Cwoe_0356  two component transcriptional regulator, LuxR family  45.36 
 
 
220 aa  155  3e-37  Conexibacter woesei DSM 14684  Bacteria  normal  0.165726  normal  0.0985551 
 
 
-
 
NC_012669  Bcav_1049  two component transcriptional regulator, LuxR family  46.67 
 
 
222 aa  155  3e-37  Beutenbergia cavernae DSM 12333  Bacteria  normal  0.661499  normal  0.245945 
 
 
-
 
NC_013739  Cwoe_0549  two component transcriptional regulator, LuxR family  46.6 
 
 
220 aa  155  4e-37  Conexibacter woesei DSM 14684  Bacteria  normal  normal 
 
 
-
 
NC_013131  Caci_7415  two component transcriptional regulator, LuxR family  44.5 
 
 
228 aa  154  5.0000000000000005e-37  Catenulispora acidiphila DSM 44928  Bacteria  normal  0.933403  normal 
 
 
-
 
NC_013947  Snas_4479  two component transcriptional regulator, LuxR family  46.63 
 
 
224 aa  154  5.0000000000000005e-37  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  0.518456  normal  0.598935 
 
 
-
 
NC_009664  Krad_1998  two component transcriptional regulator, LuxR family  45.6 
 
 
225 aa  154  6e-37  Kineococcus radiotolerans SRS30216  Bacteria  normal  0.12496  normal 
 
 
-
 
NC_009921  Franean1_4684  two component LuxR family transcriptional regulator  46.28 
 
 
223 aa  154  6e-37  Frankia sp. EAN1pec  Bacteria  normal  0.51425  normal 
 
 
-
 
NC_013530  Xcel_2717  two component transcriptional regulator, LuxR family  43.55 
 
 
223 aa  154  6e-37  Xylanimonas cellulosilytica DSM 15894  Bacteria  normal  n/a   
 
 
-
 
NC_013595  Sros_8793  response regulator receiver protein  45.26 
 
 
221 aa  154  7e-37  Streptosporangium roseum DSM 43021  Bacteria  normal  0.321987  normal 
 
 
-
 
NC_013170  Ccur_01320  response regulator containing a CheY-like receiver domain protein and an HTH DNA-binding domain protein  42.19 
 
 
261 aa  154  8e-37  Cryptobacterium curtum DSM 15641  Bacteria  normal  normal 
 
 
-
 
NC_008697  Noca_4902  response regulator receiver  48.94 
 
 
216 aa  153  1e-36  Nocardioides sp. JS614  Bacteria  normal  0.443208  normal  0.676579 
 
 
-
 
NC_013595  Sros_2533  response regulator receiver protein  47.12 
 
 
220 aa  153  1e-36  Streptosporangium roseum DSM 43021  Bacteria  normal  normal  0.495874 
 
 
-
 
NC_013131  Caci_6049  two component transcriptional regulator, LuxR family  45.14 
 
 
224 aa  153  1e-36  Catenulispora acidiphila DSM 44928  Bacteria  normal  0.764436  normal 
 
 
-
 
NC_013093  Amir_6235  two component transcriptional regulator, LuxR family  44.74 
 
 
215 aa  152  2e-36  Actinosynnema mirum DSM 43827  Bacteria  normal  0.502704  n/a   
 
 
-
 
NC_008148  Rxyl_2809  two component LuxR family transcriptional regulator  42.93 
 
 
219 aa  152  2e-36  Rubrobacter xylanophilus DSM 9941  Bacteria  normal  n/a   
 
 
-
 
NC_013595  Sros_5619  response regulator receiver protein  45.7 
 
 
226 aa  152  2e-36  Streptosporangium roseum DSM 43021  Bacteria  normal  0.0556461  normal  0.802866 
 
 
-
 
NC_013235  Namu_3387  two component transcriptional regulator, LuxR family  44.5 
 
 
223 aa  152  2e-36  Nakamurella multipartita DSM 44233  Bacteria  hitchhiker  0.0000386408  hitchhiker  0.000570848 
 
 
-
 
NC_013595  Sros_4508  response regulator receiver protein  44.21 
 
 
219 aa  153  2e-36  Streptosporangium roseum DSM 43021  Bacteria  normal  0.401356  normal  0.568133 
 
 
-
 
NC_012669  Bcav_0335  two component transcriptional regulator, LuxR family  46.07 
 
 
220 aa  152  2.9999999999999998e-36  Beutenbergia cavernae DSM 12333  Bacteria  normal  normal 
 
 
-
 
NC_013595  Sros_3251  response regulator receiver protein  43.09 
 
 
221 aa  151  4e-36  Streptosporangium roseum DSM 43021  Bacteria  normal  0.0793449  normal 
 
 
-
 
NC_013739  Cwoe_4855  two component transcriptional regulator, LuxR family  42.36 
 
 
244 aa  152  4e-36  Conexibacter woesei DSM 14684  Bacteria  normal  0.093919  normal 
 
 
-
 
NC_011886  Achl_2270  two component transcriptional regulator, LuxR family  46.04 
 
 
242 aa  151  4e-36  Arthrobacter chlorophenolicus A6  Bacteria  n/a    hitchhiker  0.000000000113212 
 
 
-
 
NC_012669  Bcav_3891  two component transcriptional regulator, LuxR family  45.26 
 
 
221 aa  151  5e-36  Beutenbergia cavernae DSM 12333  Bacteria  normal  normal 
 
 
-
 
NC_013174  Jden_1873  two component transcriptional regulator, LuxR family  42.5 
 
 
233 aa  151  5.9999999999999996e-36  Jonesia denitrificans DSM 20603  Bacteria  normal  0.145213  normal  0.385799 
 
 
-
 
NC_013131  Caci_8412  two component transcriptional regulator, LuxR family  45.74 
 
 
239 aa  150  8.999999999999999e-36  Catenulispora acidiphila DSM 44928  Bacteria  normal  normal 
 
 
-
 
NC_013169  Ksed_04500  response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain  45.41 
 
 
244 aa  150  1e-35  Kytococcus sedentarius DSM 20547  Bacteria  normal  normal 
 
 
-
 
NC_014151  Cfla_2842  two component transcriptional regulator, LuxR family  45.23 
 
 
226 aa  150  1e-35  Cellulomonas flavigena DSM 20109  Bacteria  normal  0.622781  decreased coverage  0.00305681 
 
 
-
 
NC_009664  Krad_2599  two component transcriptional regulator, LuxR family  42.47 
 
 
211 aa  150  1e-35  Kineococcus radiotolerans SRS30216  Bacteria  normal  normal 
 
 
-
 
NC_013093  Amir_4051  two component transcriptional regulator, LuxR family  45.55 
 
 
225 aa  150  1e-35  Actinosynnema mirum DSM 43827  Bacteria  decreased coverage  0.00308286  n/a   
 
 
-
 
NC_013093  Amir_2811  two component transcriptional regulator, LuxR family  46.28 
 
 
217 aa  149  2e-35  Actinosynnema mirum DSM 43827  Bacteria  normal  0.206772  n/a   
 
 
-
 
NC_009953  Sare_4860  two component LuxR family transcriptional regulator  44.09 
 
 
219 aa  150  2e-35  Salinispora arenicola CNS-205  Bacteria  normal  0.452521  normal  0.0798716 
 
 
-
 
NC_013757  Gobs_2015  two component transcriptional regulator, LuxR family  43.88 
 
 
232 aa  149  3e-35  Geodermatophilus obscurus DSM 43160  Bacteria  normal  0.706703  n/a   
 
 
-
 
NC_013947  Snas_1903  two component transcriptional regulator, LuxR family  44.74 
 
 
225 aa  149  3e-35  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  0.202425  normal  0.182857 
 
 
-
 
NC_013172  Bfae_20460  response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain  45.31 
 
 
229 aa  148  4e-35  Brachybacterium faecium DSM 4810  Bacteria  normal  0.0212792  n/a   
 
 
-
 
NC_013093  Amir_2737  two component transcriptional regulator, LuxR family  45.08 
 
 
227 aa  148  6e-35  Actinosynnema mirum DSM 43827  Bacteria  normal  0.418014  n/a   
 
 
-
 
NC_013595  Sros_4115  response regulator receiver protein  47.34 
 
 
216 aa  147  7e-35  Streptosporangium roseum DSM 43021  Bacteria  normal  0.071707  normal  0.0608108 
 
 
-
 
NC_009380  Strop_2458  response regulator receiver  43.55 
 
 
220 aa  147  7e-35  Salinispora tropica CNB-440  Bacteria  normal  0.0554598  normal 
 
 
-
 
NC_013595  Sros_3244  response regulator receiver protein  44.68 
 
 
218 aa  147  8e-35  Streptosporangium roseum DSM 43021  Bacteria  hitchhiker  0.000568428  normal  0.332742 
 
 
-
 
NC_013947  Snas_2469  two component transcriptional regulator, LuxR family  48.09 
 
 
214 aa  147  9e-35  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  0.126163  normal 
 
 
-
 
NC_013530  Xcel_1618  two component transcriptional regulator, LuxR family  43.68 
 
 
220 aa  147  1.0000000000000001e-34  Xylanimonas cellulosilytica DSM 15894  Bacteria  normal  n/a   
 
 
-
 
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