More than 300 homologs were found in PanDaTox collection
for query gene Saro_1236 on replicon NC_007794
Organism: Novosphingobium aromaticivorans DSM 12444



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Replicon accession
Locus tag
Product
% identity
Alignment on query gene
Alignment on homolog gene
Length
Bit score

E-value
Organism name
Kingdom
Plasmid clonability
Plasmid unclonability p-value
Fosmid clonability
Fosmid unclonability p-value
Coverage Plot
PanDaTox homologs
Experimental validation
NC_007794  Saro_1236  two component LuxR family transcriptional regulator  100 
 
 		 208 aa  413  1e-114  Novosphingobium aromaticivorans DSM 12444  Bacteria  normal  0.23752  n/a   
 
 
-
 
NC_007644  Moth_0975  two component LuxR family transcriptional regulator  34.3 
 
 		 222 aa  132  3.9999999999999996e-30  Moorella thermoacetica ATCC 39073  Bacteria  normal  1  normal  1 
 
 
-
 
NC_009620  Smed_4059  two component LuxR family transcriptional regulator  35.61 
 
 		 212 aa  128  7.000000000000001e-29  Sinorhizobium medicae WSM419  Bacteria  normal  0.111025  normal  1 
 
 
-
 
NC_011901  Tgr7_2171  two component transcriptional regulator, LuxR family  34.95 
 
 		 227 aa  127  1.0000000000000001e-28  Thioalkalivibrio sp. HL-EbGR7  Bacteria  normal  1  n/a   
 
 
-
 
NC_010184  BcerKBAB4_0919  two component LuxR family transcriptional regulator  31.03 
 
 		 214 aa  127  1.0000000000000001e-28  Bacillus weihenstephanensis KBAB4  Bacteria  normal  1  n/a   
 
 
-
 
NC_003909  BCE_1102  LuxR family DNA-binding response regulator  30.1 
 
 		 214 aa  126  2.0000000000000002e-28  Bacillus cereus ATCC 10987  Bacteria  normal  1  n/a   
 
 
-
 
NC_009012  Cthe_1267  two component LuxR family transcriptional regulator  33.98 
 
 		 216 aa  124  7e-28  Clostridium thermocellum ATCC 27405  Bacteria  normal  1  n/a   
 
 
-
 
NC_013385  Adeg_1034  two component transcriptional regulator, LuxR family  34.31 
 
 		 213 aa  124  1e-27  Ammonifex degensii KC4  Bacteria  normal  1  n/a   
 
 
-
 
NC_010524  Lcho_0242  two component LuxR family transcriptional regulator  38.54 
 
 		 211 aa  124  1e-27  Leptothrix cholodnii SP-6  Bacteria  n/a    decreased coverage  0.000159114 
 
 
-
 
NC_009338  Mflv_5014  two component LuxR family transcriptional regulator  34.47 
 
 		 209 aa  124  1e-27  Mycobacterium gilvum PYR-GCK  Bacteria  normal  0.103708  normal  0.29037 
 
 
-
 
NC_004347  SO_3982  DNA-binding nitrate/nitrite response regulator  34.65 
 
 		 209 aa  123  2e-27  Shewanella oneidensis MR-1  Bacteria  n/a    n/a   
 
 
-
 
NC_009656  PSPA7_1229  transcriptional regulator NarL  39.22 
 
 		 219 aa  123  2e-27  Pseudomonas aeruginosa PA7  Bacteria  normal  1  n/a   
 
 
-
 
NC_013947  Snas_3745  two component transcriptional regulator, LuxR family  38.05 
 
 		 235 aa  123  2e-27  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  0.627677  normal  0.255424 
 
 
-
 
NC_011830  Dhaf_2789  two component transcriptional regulator, LuxR family  33.33 
 
 		 212 aa  122  3e-27  Desulfitobacterium hafniense DCB-2  Bacteria  normal  0.246733  n/a   
 
 
-
 
NC_008463  PA14_13730  transcriptional regulator NarL  39.22 
 
 		 219 aa  123  3e-27  Pseudomonas aeruginosa UCBPP-PA14  Bacteria  normal  1  normal  0.817999 
 
 
-
 
NC_010506  Swoo_0970  two component LuxR family transcriptional regulator  35.47 
 
 		 209 aa  121  7e-27  Shewanella woodyi ATCC 51908  Bacteria  normal  0.0307407  normal  1 
 
 
-
 
NC_009665  Shew185_3713  two component LuxR family transcriptional regulator  34.48 
 
 		 209 aa  121  8e-27  Shewanella baltica OS185  Bacteria  hitchhiker  0.000000000161759  n/a   
 
 
-
 
NC_009997  Sbal195_3836  two component LuxR family transcriptional regulator  34.48 
 
 		 209 aa  121  8e-27  Shewanella baltica OS195  Bacteria  hitchhiker  0.00000136397  normal  0.0231387 
 
 
-
 
NC_011831  Cagg_3359  two component transcriptional regulator, LuxR family  37.56 
 
 		 219 aa  121  8e-27  Chloroflexus aggregans DSM 9485  Bacteria  hitchhiker  0.00321115  hitchhiker  0.000132937 
 
 
-
 
NC_009052  Sbal_0792  two component LuxR family transcriptional regulator  34.48 
 
 		 209 aa  121  8e-27  Shewanella baltica OS155  Bacteria  hitchhiker  0.000000151034  n/a   
 
 
-
 
NC_009901  Spea_0829  two component LuxR family transcriptional regulator  34.48 
 
 		 209 aa  121  8e-27  Shewanella pealeana ATCC 700345  Bacteria  hitchhiker  0.00236991  n/a   
 
 
-
 
NC_009092  Shew_0842  two component LuxR family transcriptional regulator  35.47 
 
 		 209 aa  121  8e-27  Shewanella loihica PV-4  Bacteria  hitchhiker  0.00000336278  normal  1 
 
 
-
 
NC_008321  Shewmr4_0657  two component LuxR family transcriptional regulator  34.65 
 
 		 209 aa  120  9.999999999999999e-27  Shewanella sp. MR-4  Bacteria  hitchhiker  0.000000493749  normal  0.229808 
 
 
-
 
NC_008322  Shewmr7_3365  two component LuxR family transcriptional regulator  34.65 
 
 		 209 aa  120  9.999999999999999e-27  Shewanella sp. MR-7  Bacteria  hitchhiker  0.0000651556  normal  0.0242167 
 
 
-
 
NC_008577  Shewana3_0656  two component LuxR family transcriptional regulator  34.65 
 
 		 209 aa  120  9.999999999999999e-27  Shewanella sp. ANA-3  Bacteria  hitchhiker  0.000000830399  normal  0.140804 
 
 
-
 
NC_011663  Sbal223_3654  two component transcriptional regulator, LuxR family  34.65 
 
 		 209 aa  120  9.999999999999999e-27  Shewanella baltica OS223  Bacteria  unclonable  0.000000000464283  hitchhiker  0.00000781977 
 
 
-
 
NC_010320  Teth514_2042  two component LuxR family transcriptional regulator  30.77 
 
 		 208 aa  119  3e-26  Thermoanaerobacter sp. X514  Bacteria  normal  1  n/a   
 
 
-
 
NC_008726  Mvan_1358  two component LuxR family transcriptional regulator  35.5 
 
 		 220 aa  119  3.9999999999999996e-26  Mycobacterium vanbaalenii PYR-1  Bacteria  normal  0.110964  normal  1 
 
 
-
 
NC_011898  Ccel_1863  two component transcriptional regulator, LuxR family  31.07 
 
 		 216 aa  119  3.9999999999999996e-26  Clostridium cellulolyticum H10  Bacteria  hitchhiker  0.00000548978  n/a   
 
 
-
 
NC_006369  lpl2571  transmission activator LetA  32.85 
 
 		 219 aa  119  4.9999999999999996e-26  Legionella pneumophila str. Lens  Bacteria  n/a    n/a   
 
 
-
 
NC_009523  RoseRS_1984  two component LuxR family transcriptional regulator  34.31 
 
 		 220 aa  118  6e-26  Roseiflexus sp. RS-1  Bacteria  normal  0.178457  normal  0.123783 
 
 
-
 
NC_008148  Rxyl_2613  two component LuxR family transcriptional regulator  38.92 
 
 		 207 aa  118  6e-26  Rubrobacter xylanophilus DSM 9941  Bacteria  normal  1  n/a   
 
 
-
 
NC_008340  Mlg_1669  two component LuxR family transcriptional regulator  35.07 
 
 		 221 aa  118  6e-26  Alkalilimnicola ehrlichii MLHE-1  Bacteria  normal  1  normal  1 
 
 
-
 
NC_008345  Sfri_0620  two component transcriptional regulator, LuxR family protein  34.65 
 
 		 209 aa  118  6e-26  Shewanella frigidimarina NCIMB 400  Bacteria  unclonable  0.000000000275655  n/a   
 
 
-
 
NC_013131  Caci_5202  two component transcriptional regulator, LuxR family  38.16 
 
 		 225 aa  118  6e-26  Catenulispora acidiphila DSM 44928  Bacteria  normal  0.677169  normal  0.920773 
 
 
-
 
NC_006368  lpp2699  transmission activator LetA  32.85 
 
 		 219 aa  118  7e-26  Legionella pneumophila str. Paris  Bacteria  n/a    n/a   
 
 
-
 
NC_010571  Oter_3372  two component LuxR family transcriptional regulator  35.47 
 
 		 212 aa  118  7.999999999999999e-26  Opitutus terrae PB90-1  Bacteria  normal  1  normal  0.383896 
 
 
-
 
NC_009767  Rcas_3262  two component LuxR family transcriptional regulator  36.06 
 
 		 222 aa  117  7.999999999999999e-26  Roseiflexus castenholzii DSM 13941  Bacteria  normal  1  normal  0.764026 
 
 
-
 
NC_007333  Tfu_2233  LuxR response regulator receiver  35.58 
 
 		 228 aa  117  9.999999999999999e-26  Thermobifida fusca YX  Bacteria  normal  1  n/a   
 
 
-
 
NC_009457  VC0395_A0833  response regulator  31.86 
 
 		 227 aa  117  9.999999999999999e-26  Vibrio cholerae O395  Bacteria  hitchhiker  0.0000189156  n/a   
 
 
-
 
NC_008709  Ping_1192  transcriptional regulator of LuxR family protein  30.39 
 
 		 214 aa  117  9.999999999999999e-26  Psychromonas ingrahamii 37  Bacteria  normal  1  normal  1 
 
 
-
 
NC_013131  Caci_7658  two component transcriptional regulator, LuxR family  34.93 
 
 		 219 aa  117  1.9999999999999998e-25  Catenulispora acidiphila DSM 44928  Bacteria  normal  1  normal  1 
 
 
-
 
NC_008700  Sama_0646  response regulator receiver protein  33.66 
 
 		 209 aa  116  1.9999999999999998e-25  Shewanella amazonensis SB2B  Bacteria  normal  0.0492071  normal  1 
 
 
-
 
NC_011138  MADE_03853  transcriptional regulator NarL  33.49 
 
 		 217 aa  117  1.9999999999999998e-25  Alteromonas macleodii 'Deep ecotype'  Bacteria  unclonable  0.0000020037  n/a   
 
 
-
 
NC_009438  Sputcn32_0683  two component LuxR family transcriptional regulator  34.16 
 
 		 209 aa  117  1.9999999999999998e-25  Shewanella putrefaciens CN-32  Bacteria  unclonable  0.000000000388278  n/a   
 
 
-
 
NC_014212  Mesil_2510  two component transcriptional regulator, LuxR family  33.65 
 
 		 217 aa  116  3e-25  Meiothermus silvanus DSM 9946  Bacteria  normal  1  normal  1 
 
 
-
 
NC_008025  Dgeo_0315  two component LuxR family transcriptional regulator  33.17 
 
 		 214 aa  116  3e-25  Deinococcus geothermalis DSM 11300  Bacteria  normal  1  hitchhiker  0.0084678 
 
 
-
 
NC_010001  Cphy_3936  two component LuxR family transcriptional regulator  33 
 
 		 213 aa  115  3.9999999999999997e-25  Clostridium phytofermentans ISDg  Bacteria  hitchhiker  0.00507176  n/a   
 
 
-
 
NC_007348  Reut_B5066  LuxR response regulator receiver  33.82 
 
 		 217 aa  115  6e-25  Ralstonia eutropha JMP134  Bacteria  normal  0.822528  n/a   
 
 
-
 
NC_013595  Sros_3669  response regulator receiver protein  36.19 
 
 		 213 aa  115  6e-25  Streptosporangium roseum DSM 43021  Bacteria  normal  1  normal  1 
 
 
-
 
NC_009831  Ssed_0929  two component LuxR family transcriptional regulator  34.48 
 
 		 209 aa  115  6.9999999999999995e-25  Shewanella sediminis HAW-EB3  Bacteria  unclonable  0.0000000567962  normal  1 
 
 
-
 
NC_013947  Snas_1903  two component transcriptional regulator, LuxR family  35.68 
 
 		 225 aa  114  1.0000000000000001e-24  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  0.202425  normal  0.182857 
 
 
-
 
NC_005945  BAS1659  LuxR family DNA-binding response regulator  31.03 
 
 		 212 aa  114  1.0000000000000001e-24  Bacillus anthracis str. Sterne  Bacteria  normal  1  n/a   
 
 
-
 
NC_013739  Cwoe_4937  two component transcriptional regulator, LuxR family  36.97 
 
 		 224 aa  114  1.0000000000000001e-24  Conexibacter woesei DSM 14684  Bacteria  normal  0.570807  normal  0.210467 
 
 
-
 
NC_007530  GBAA_1791  LuxR family DNA-binding response regulator  31.03 
 
 		 212 aa  114  1.0000000000000001e-24  Bacillus anthracis str. 'Ames Ancestor'  Bacteria  normal  0.276817  n/a   
 
 
-
 
NC_011312  VSAL_I2370  nitrate/nitrite response regulator protein NarP  32.68 
 
 		 203 aa  114  1.0000000000000001e-24  Aliivibrio salmonicida LFI1238  Bacteria  normal  1  n/a   
 
 
-
 
NC_011312  VSAL_I2141  response regulator  30.39 
 
 		 214 aa  114  1.0000000000000001e-24  Aliivibrio salmonicida LFI1238  Bacteria  normal  0.126922  n/a   
 
 
-
 
NC_013946  Mrub_0806  two component LuxR family transcriptional regulator  33.01 
 
 		 216 aa  114  1.0000000000000001e-24  Meiothermus ruber DSM 1279  Bacteria  normal  1  normal  1 
 
 
-
 
NC_014210  Ndas_2024  two component transcriptional regulator, LuxR family  34.63 
 
 		 220 aa  114  1.0000000000000001e-24  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  0.876474  normal  1 
 
 
-
 
NC_012917  PC1_2669  response regulator  31.07 
 
 		 218 aa  113  2.0000000000000002e-24  Pectobacterium carotovorum subsp. carotovorum PC1  Bacteria  decreased coverage  0.000700042  n/a   
 
 
-
 
NC_009439  Pmen_2375  two component LuxR family transcriptional regulator  35.12 
 
 		 214 aa  113  2.0000000000000002e-24  Pseudomonas mendocina ymp  Bacteria  normal  0.405291  normal  0.0506876 
 
 
-
 
NC_009708  YpsIP31758_2253  response regulator  30.88 
 
 		 218 aa  113  2.0000000000000002e-24  Yersinia pseudotuberculosis IP 31758  Bacteria  hitchhiker  0.00000726498  n/a   
 
 
-
 
NC_010465  YPK_2356  response regulator  30.88 
 
 		 218 aa  113  2.0000000000000002e-24  Yersinia pseudotuberculosis YPIII  Bacteria  normal  0.996954  n/a   
 
 
-
 
NC_010159  YpAngola_A2052  response regulator  30.88 
 
 		 218 aa  113  2.0000000000000002e-24  Yersinia pestis Angola  Bacteria  hitchhiker  0.0000052182  hitchhiker  0.00148564 
 
 
-
 
NC_011725  BCB4264_A1802  DNA-binding response regulator, LuxR family  31.53 
 
 		 229 aa  112  3e-24  Bacillus cereus B4264  Bacteria  normal  1  n/a   
 
 
-
 
NC_010159  YpAngola_A2794  nitrate/nitrite response regulator protein NarP  31.71 
 
 		 209 aa  112  3e-24  Yersinia pestis Angola  Bacteria  normal  1  normal  0.0858473 
 
 
-
 
NC_010465  YPK_1384  two component LuxR family transcriptional regulator  31.71 
 
 		 209 aa  112  3e-24  Yersinia pseudotuberculosis YPIII  Bacteria  normal  1  n/a   
 
 
-
 
NC_008699  Noca_2635  response regulator receiver  37.13 
 
 		 207 aa  112  3e-24  Nocardioides sp. JS614  Bacteria  normal  1  n/a   
 
 
-
 
NC_008740  Maqu_1191  two component LuxR family transcriptional regulator  34.45 
 
 		 219 aa  112  3e-24  Marinobacter aquaeolei VT8  Bacteria  normal  0.259161  n/a   
 
 
-
 
NC_008789  Hhal_1965  two component LuxR family transcriptional regulator  35.24 
 
 		 217 aa  113  3e-24  Halorhodospira halophila SL1  Bacteria  normal  1  n/a   
 
 
-
 
NC_011772  BCG9842_B3538  DNA-binding response regulator, LuxR family  31.53 
 
 		 223 aa  112  3e-24  Bacillus cereus G9842  Bacteria  normal  1  normal  1 
 
 
-
 
NC_009943  Dole_0029  two component LuxR family transcriptional regulator  33.49 
 
 		 214 aa  112  3e-24  Desulfococcus oleovorans Hxd3  Bacteria  normal  0.317943  n/a   
 
 
-
 
NC_009708  YpsIP31758_1270  nitrate/nitrite response regulator protein NarP  31.71 
 
 		 209 aa  112  4.0000000000000004e-24  Yersinia pseudotuberculosis IP 31758  Bacteria  normal  0.214676  n/a   
 
 
-
 
NC_005957  BT9727_1637  response regulator  31.03 
 
 		 212 aa  112  4.0000000000000004e-24  Bacillus thuringiensis serovar konkukian str. 97-27  Bacteria  hitchhiker  0.00000588398  n/a   
 
 
-
 
NC_011773  BCAH820_1839  DNA-binding response regulator, LuxR family  31.03 
 
 		 212 aa  112  4.0000000000000004e-24  Bacillus cereus AH820  Bacteria  n/a    normal  1 
 
 
-
 
NC_003910  CPS_3271  response regulator  29.41 
 
 		 214 aa  112  5e-24  Colwellia psychrerythraea 34H  Bacteria  normal  0.0222898  n/a   
 
 
-
 
NC_013421  Pecwa_1594  response regulator  31.07 
 
 		 218 aa  112  5e-24  Pectobacterium wasabiae WPP163  Bacteria  normal  0.518893  n/a   
 
 
-
 
NC_009523  RoseRS_4275  two component LuxR family transcriptional regulator  32.35 
 
 		 226 aa  111  6e-24  Roseiflexus sp. RS-1  Bacteria  normal  0.798613  normal  0.287125 
 
 
-
 
NC_003909  BCE_1863  LuxR family DNA-binding response regulator  31.03 
 
 		 218 aa  112  6e-24  Bacillus cereus ATCC 10987  Bacteria  normal  0.345514  n/a   
 
 
-
 
NC_009832  Spro_3490  two component LuxR family transcriptional regulator  34.72 
 
 		 210 aa  111  6e-24  Serratia proteamaculans 568  Bacteria  normal  0.0559776  normal  1 
 
 
-
 
NC_011658  BCAH187_A1913  DNA-binding response regulator, LuxR family  31.03 
 
 		 212 aa  111  6e-24  Bacillus cereus AH187  Bacteria  normal  0.605645  n/a   
 
 
-
 
NC_011772  BCG9842_B3078  DNA-binding response regulator, LuxR family  31.9 
 
 		 213 aa  111  7.000000000000001e-24  Bacillus cereus G9842  Bacteria  normal  1  hitchhiker  0.000000185138 
 
 
-
 
NC_011831  Cagg_1769  two component transcriptional regulator, LuxR family  34.6 
 
 		 219 aa  111  7.000000000000001e-24  Chloroflexus aggregans DSM 9485  Bacteria  normal  0.221401  normal  0.0578747 
 
 
-
 
NC_014165  Tbis_0228  LuxR family two component transcriptional regulator  36.1 
 
 		 206 aa  111  7.000000000000001e-24  Thermobispora bispora DSM 43833  Bacteria  normal  1  normal  1 
 
 
-
 
NC_012880  Dd703_1450  response regulator  30.88 
 
 		 218 aa  111  9e-24  Dickeya dadantii Ech703  Bacteria  normal  1  n/a   
 
 
-
 
NC_011725  BCB4264_A2245  DNA-binding response regulator, LuxR family  31.9 
 
 		 213 aa  111  9e-24  Bacillus cereus B4264  Bacteria  normal  1  n/a   
 
 
-
 
NC_009439  Pmen_4183  two component LuxR family transcriptional regulator  34.31 
 
 		 220 aa  111  9e-24  Pseudomonas mendocina ymp  Bacteria  normal  1  normal  1 
 
 
-
 
NC_003295  RSc0292  response regulator transcription regulator protein  32.68 
 
 		 210 aa  110  1.0000000000000001e-23  Ralstonia solanacearum GMI1000  Bacteria  normal  1  normal  1 
 
 
-
 
NC_009487  SaurJH9_1902  two component LuxR family transcriptional regulator  31.22 
 
 		 207 aa  110  1.0000000000000001e-23  Staphylococcus aureus subsp. aureus JH9  Bacteria  hitchhiker  0.00000041006  n/a   
 
 
-
 
NC_009783  VIBHAR_02748  response regulator  29.41 
 
 		 214 aa  110  1.0000000000000001e-23  Vibrio harveyi ATCC BAA-1116  Bacteria  n/a    n/a   
 
 
-
 
NC_013525  Tter_0799  two component transcriptional regulator, LuxR family  30.52 
 
 		 226 aa  110  1.0000000000000001e-23  Thermobaculum terrenum ATCC BAA-798  Bacteria  n/a    n/a   
 
 
-
 
NC_008009  Acid345_0268  two component LuxR family transcriptional regulator  34.13 
 
 		 217 aa  110  1.0000000000000001e-23  Candidatus Koribacter versatilis Ellin345  Bacteria  normal  0.289536  normal  1 
 
 
-
 
NC_013132  Cpin_2103  two component transcriptional regulator, LuxR family  32.69 
 
 		 210 aa  110  1.0000000000000001e-23  Chitinophaga pinensis DSM 2588  Bacteria  normal  1  normal  1 
 
 
-
 
NC_013525  Tter_1109  two component transcriptional regulator, LuxR family  31.22 
 
 		 218 aa  110  1.0000000000000001e-23  Thermobaculum terrenum ATCC BAA-798  Bacteria  n/a    n/a   
 
 
-
 
NC_008578  Acel_1760  two component LuxR family transcriptional regulator  34.91 
 
 		 303 aa  110  1.0000000000000001e-23  Acidothermus cellulolyticus 11B  Bacteria  normal  1  normal  0.887336 
 
 
-
 
NC_013525  Tter_0641  two component transcriptional regulator, LuxR family  30.35 
 
 		 1648 aa  110  1.0000000000000001e-23  Thermobaculum terrenum ATCC BAA-798  Bacteria  n/a    n/a   
 
 
-
 
NC_009632  SaurJH1_1936  response regulator receiver  31.22 
 
 		 207 aa  110  1.0000000000000001e-23  Staphylococcus aureus subsp. aureus JH1  Bacteria  unclonable  0.000000150819  n/a   
 
 
-
 
NC_014158  Tpau_1410  two component transcriptional regulator, LuxR family  36.19 
 
 		 222 aa  110  1.0000000000000001e-23  Tsukamurella paurometabola DSM 20162  Bacteria  normal  0.46664  n/a   
 
 
-
 
NC_009253  Dred_2108  two component LuxR family transcriptional regulator  34.29 
 
 		 218 aa  110  1.0000000000000001e-23  Desulfotomaculum reducens MI-1  Bacteria  normal  1  n/a   
 
 
-
 
NC_011083  SeHA_C2162  response regulator  31.22 
 
 		 218 aa  110  2.0000000000000002e-23  Salmonella enterica subsp. enterica serovar Heidelberg str. SL476  Bacteria  normal  0.284818  hitchhiker  0.000000016111 
 
 
-
 
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