More than 300 homologs were found in PanDaTox collection
for query gene RSc1894 on replicon NC_003295
Organism: Ralstonia solanacearum GMI1000



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_003295  RSc1894  methyl-accepting chemotaxis transducer transmembrane protein  100 
 
 
535 aa  1050    Ralstonia solanacearum GMI1000  Bacteria  normal  0.0710104  normal  0.94486 
 
 
-
 
NC_010676  Bphyt_6645  methyl-accepting chemotaxis sensory transducer  57.58 
 
 
583 aa  526  1e-148  Burkholderia phytofirmans PsJN  Bacteria  normal  normal  0.983597 
 
 
-
 
NC_009080  BMA10247_0927  methyl-accepting chemotaxis protein  55.77 
 
 
580 aa  478  1e-133  Burkholderia mallei NCTC 10247  Bacteria  normal  n/a   
 
 
-
 
NC_009076  BURPS1106A_2002  methyl-accepting chemotaxis protein  55.77 
 
 
580 aa  478  1e-133  Burkholderia pseudomallei 1106a  Bacteria  normal  n/a   
 
 
-
 
NC_006348  BMA1130  methyl-accepting chemotaxis protein  55.77 
 
 
580 aa  478  1e-133  Burkholderia mallei ATCC 23344  Bacteria  normal  0.306094  n/a   
 
 
-
 
NC_008836  BMA10229_A0232  methyl-accepting chemotaxis protein  55.77 
 
 
580 aa  478  1e-133  Burkholderia mallei NCTC 10229  Bacteria  normal  n/a   
 
 
-
 
NC_008785  BMASAVP1_A1571  methyl-accepting chemotaxis protein  55.77 
 
 
580 aa  478  1e-133  Burkholderia mallei SAVP1  Bacteria  normal  0.295886  n/a   
 
 
-
 
NC_010512  Bcenmc03_6305  methyl-accepting chemotaxis sensory transducer  55.47 
 
 
528 aa  472  1e-132  Burkholderia cenocepacia MC0-3  Bacteria  normal  normal 
 
 
-
 
NC_007434  BURPS1710b_2139  methyl-accepting chemotaxis protein  55.58 
 
 
616 aa  474  1e-132  Burkholderia pseudomallei 1710b  Bacteria  normal  0.942679  n/a   
 
 
-
 
NC_007651  BTH_I2374  methyl-accepting chemotaxis protein  55.38 
 
 
586 aa  475  1e-132  Burkholderia thailandensis E264  Bacteria  normal  0.205822  n/a   
 
 
-
 
NC_009074  BURPS668_1983  methyl-accepting chemotaxis protein  55.77 
 
 
580 aa  473  1e-132  Burkholderia pseudomallei 668  Bacteria  normal  n/a   
 
 
-
 
NC_007336  Reut_C6240  chemotaxis sensory transducer  48.46 
 
 
556 aa  470  1.0000000000000001e-131  Ralstonia eutropha JMP134  Bacteria  normal  n/a   
 
 
-
 
NC_010002  Daci_5852  methyl-accepting chemotaxis sensory transducer  51.92 
 
 
618 aa  471  1.0000000000000001e-131  Delftia acidovorans SPH-1  Bacteria  normal  0.217953  normal 
 
 
-
 
NC_008062  Bcen_6464  methyl-accepting chemotaxis sensory transducer  55.28 
 
 
528 aa  468  9.999999999999999e-131  Burkholderia cenocepacia AU 1054  Bacteria  normal  n/a   
 
 
-
 
NC_008752  Aave_2284  methyl-accepting chemotaxis sensory transducer  50.78 
 
 
547 aa  466  9.999999999999999e-131  Acidovorax citrulli AAC00-1  Bacteria  normal  0.206976  hitchhiker  0.0000952985 
 
 
-
 
NC_008544  Bcen2424_6699  methyl-accepting chemotaxis sensory transducer  55.28 
 
 
528 aa  468  9.999999999999999e-131  Burkholderia cenocepacia HI2424  Bacteria  normal  0.971949  normal  0.6752 
 
 
-
 
NC_010681  Bphyt_0409  methyl-accepting chemotaxis sensory transducer  52.68 
 
 
585 aa  467  9.999999999999999e-131  Burkholderia phytofirmans PsJN  Bacteria  normal  normal 
 
 
-
 
NC_007951  Bxe_A4301  methyl-accepting chemotaxis sensory transducer  52.88 
 
 
587 aa  465  1e-129  Burkholderia xenovorans LB400  Bacteria  normal  normal 
 
 
-
 
NC_010682  Rpic_2095  methyl-accepting chemotaxis sensory transducer  52.42 
 
 
520 aa  458  1e-127  Ralstonia pickettii 12J  Bacteria  normal  0.649492  normal  0.265934 
 
 
-
 
NC_007511  Bcep18194_B1523  methyl-accepting chemotaxis sensory transducer  52.61 
 
 
539 aa  455  1e-127  Burkholderia sp. 383  Bacteria  normal  normal  0.377846 
 
 
-
 
NC_010002  Daci_0742  methyl-accepting chemotaxis sensory transducer  50.96 
 
 
581 aa  456  1e-127  Delftia acidovorans SPH-1  Bacteria  normal  normal 
 
 
-
 
NC_007974  Rmet_5306  methyl-accepting chemotaxis sensory transducer  50 
 
 
565 aa  457  1e-127  Cupriavidus metallidurans CH34  Bacteria  decreased coverage  0.00488588  normal  0.0415564 
 
 
-
 
NC_010552  BamMC406_4332  methyl-accepting chemotaxis sensory transducer  52.77 
 
 
545 aa  457  1e-127  Burkholderia ambifaria MC40-6  Bacteria  normal  0.167851  normal 
 
 
-
 
NC_012856  Rpic12D_1771  methyl-accepting chemotaxis sensory transducer  52.22 
 
 
520 aa  454  1.0000000000000001e-126  Ralstonia pickettii 12D  Bacteria  normal  normal  0.841752 
 
 
-
 
NC_007348  Reut_B5868  methyl-accepting chemotaxis sensory transducer  51.24 
 
 
541 aa  436  1e-121  Ralstonia eutropha JMP134  Bacteria  normal  n/a   
 
 
-
 
NC_010515  Bcenmc03_5865  methyl-accepting chemotaxis sensory transducer  52.42 
 
 
539 aa  437  1e-121  Burkholderia cenocepacia MC0-3  Bacteria  normal  0.439663  normal 
 
 
-
 
NC_008061  Bcen_3926  methyl-accepting chemotaxis sensory transducer  52.42 
 
 
539 aa  436  1e-121  Burkholderia cenocepacia AU 1054  Bacteria  normal  0.279293  n/a   
 
 
-
 
NC_008543  Bcen2424_4440  methyl-accepting chemotaxis sensory transducer  52.42 
 
 
539 aa  436  1e-121  Burkholderia cenocepacia HI2424  Bacteria  normal  normal 
 
 
-
 
NC_008825  Mpe_A2548  methyl-accepting chemotaxis protein  51.74 
 
 
525 aa  431  1e-119  Methylibium petroleiphilum PM1  Bacteria  decreased coverage  0.00975221  normal  0.500866 
 
 
-
 
NC_008752  Aave_2436  methyl-accepting chemotaxis sensory transducer  48.55 
 
 
539 aa  415  9.999999999999999e-116  Acidovorax citrulli AAC00-1  Bacteria  normal  0.633872  normal 
 
 
-
 
NC_008825  Mpe_A2663  methyl-accepting chemotaxis sensory transducer  47.61 
 
 
520 aa  410  1e-113  Methylibium petroleiphilum PM1  Bacteria  normal  0.0198398  normal 
 
 
-
 
NC_010086  Bmul_4184  methyl-accepting chemotaxis sensory transducer  52.4 
 
 
493 aa  390  1e-107  Burkholderia multivorans ATCC 17616  Bacteria  normal  normal 
 
 
-
 
NC_008826  Mpe_B0133  methyl-accepting chemotaxis protein  47.13 
 
 
526 aa  343  5.999999999999999e-93  Methylibium petroleiphilum PM1  Bacteria  normal  0.845076  hitchhiker  0.000223015 
 
 
-
 
NC_008786  Veis_2296  methyl-accepting chemotaxis sensory transducer  40.37 
 
 
584 aa  321  1.9999999999999998e-86  Verminephrobacter eiseniae EF01-2  Bacteria  normal  0.604223  normal  0.776041 
 
 
-
 
NC_012856  Rpic12D_2632  methyl-accepting chemotaxis sensory transducer with Cache sensor  53.76 
 
 
515 aa  318  2e-85  Ralstonia pickettii 12D  Bacteria  normal  0.397554  normal  0.945455 
 
 
-
 
NC_010682  Rpic_3042  methyl-accepting chemotaxis sensory transducer  53.76 
 
 
515 aa  317  3e-85  Ralstonia pickettii 12J  Bacteria  normal  0.401177  normal 
 
 
-
 
NC_008752  Aave_0428  methyl-accepting chemotaxis sensory transducer  42.3 
 
 
597 aa  317  3e-85  Acidovorax citrulli AAC00-1  Bacteria  normal  normal 
 
 
-
 
NC_010524  Lcho_3216  methyl-accepting chemotaxis sensory transducer  53.13 
 
 
579 aa  315  1.9999999999999998e-84  Leptothrix cholodnii SP-6  Bacteria  n/a    normal 
 
 
-
 
NC_010524  Lcho_3485  methyl-accepting chemotaxis sensory transducer  42.36 
 
 
573 aa  314  1.9999999999999998e-84  Leptothrix cholodnii SP-6  Bacteria  n/a    hitchhiker  0.000328178 
 
 
-
 
NC_011992  Dtpsy_0354  methyl-accepting chemotaxis sensory transducer  41.83 
 
 
578 aa  315  1.9999999999999998e-84  Acidovorax ebreus TPSY  Bacteria  normal  0.496762  n/a   
 
 
-
 
NC_008782  Ajs_0364  methyl-accepting chemotaxis sensory transducer  41.83 
 
 
580 aa  315  1.9999999999999998e-84  Acidovorax sp. JS42  Bacteria  normal  normal 
 
 
-
 
NC_009078  BURPS1106A_A2620  methyl-accepting chemotaxis protein  42.78 
 
 
562 aa  313  4.999999999999999e-84  Burkholderia pseudomallei 1106a  Bacteria  normal  n/a   
 
 
-
 
NC_006349  BMAA0152  methyl-accepting chemotaxis protein  42.78 
 
 
565 aa  313  5.999999999999999e-84  Burkholderia mallei ATCC 23344  Bacteria  normal  n/a   
 
 
-
 
NC_009079  BMA10247_A0176  methyl-accepting chemotaxis protein  42.78 
 
 
565 aa  313  5.999999999999999e-84  Burkholderia mallei NCTC 10247  Bacteria  normal  n/a   
 
 
-
 
NC_008784  BMASAVP1_1321  methyl-accepting chemotaxis protein  42.78 
 
 
565 aa  313  5.999999999999999e-84  Burkholderia mallei SAVP1  Bacteria  normal  n/a   
 
 
-
 
NC_009075  BURPS668_A2764  methyl-accepting chemotaxis protein  42.78 
 
 
562 aa  312  9e-84  Burkholderia pseudomallei 668  Bacteria  normal  0.627836  n/a   
 
 
-
 
NC_007404  Tbd_1620  methyl-accepting chemotaxis sensory transducer  48.91 
 
 
559 aa  312  1e-83  Thiobacillus denitrificans ATCC 25259  Bacteria  normal  0.439493  normal  0.532508 
 
 
-
 
NC_007435  BURPS1710b_A1029  methyl-accepting chemotaxis protein  42.59 
 
 
562 aa  311  2e-83  Burkholderia pseudomallei 1710b  Bacteria  normal  0.815966  n/a   
 
 
-
 
NC_010627  Bphy_7569  methyl-accepting chemotaxis sensory transducer  42.26 
 
 
576 aa  310  4e-83  Burkholderia phymatum STM815  Bacteria  normal  0.448898  normal  0.153923 
 
 
-
 
NC_007974  Rmet_5641  methyl-accepting chemotaxis sensory transducer  50.13 
 
 
519 aa  309  6.999999999999999e-83  Cupriavidus metallidurans CH34  Bacteria  normal  normal 
 
 
-
 
NC_007348  Reut_B5547  methyl-accepting chemotaxis sensory transducer  54.55 
 
 
520 aa  309  9e-83  Ralstonia eutropha JMP134  Bacteria  normal  n/a   
 
 
-
 
NC_007404  Tbd_0660  chemotaxis sensory transducer  43.8 
 
 
586 aa  307  4.0000000000000004e-82  Thiobacillus denitrificans ATCC 25259  Bacteria  normal  0.756829  normal 
 
 
-
 
NC_007908  Rfer_3937  methyl-accepting chemotaxis sensory transducer  41.41 
 
 
589 aa  307  4.0000000000000004e-82  Rhodoferax ferrireducens T118  Bacteria  normal  n/a   
 
 
-
 
NC_010681  Bphyt_2259  methyl-accepting chemotaxis sensory transducer  44.13 
 
 
588 aa  307  4.0000000000000004e-82  Burkholderia phytofirmans PsJN  Bacteria  normal  0.131825  normal  0.497854 
 
 
-
 
NC_007951  Bxe_A2002  methyl-accepting chemotaxis sensory transducer  42.78 
 
 
601 aa  306  5.0000000000000004e-82  Burkholderia xenovorans LB400  Bacteria  normal  normal 
 
 
-
 
NC_010676  Bphyt_6336  methyl-accepting chemotaxis sensory transducer  42.45 
 
 
581 aa  306  6e-82  Burkholderia phytofirmans PsJN  Bacteria  normal  0.794546  normal 
 
 
-
 
NC_012791  Vapar_4189  methyl-accepting chemotaxis sensory transducer  43.15 
 
 
559 aa  305  1.0000000000000001e-81  Variovorax paradoxus S110  Bacteria  normal  n/a   
 
 
-
 
NC_007650  BTH_II0449  methyl-accepting chemotaxis protein  41.51 
 
 
562 aa  305  1.0000000000000001e-81  Burkholderia thailandensis E264  Bacteria  normal  0.123732  n/a   
 
 
-
 
NC_007951  Bxe_A1341  methyl-accepting chemotaxis sensory transducer  53.56 
 
 
558 aa  305  1.0000000000000001e-81  Burkholderia xenovorans LB400  Bacteria  normal  normal 
 
 
-
 
NC_012917  PC1_0111  methyl-accepting chemotaxis sensory transducer  37.74 
 
 
556 aa  304  3.0000000000000004e-81  Pectobacterium carotovorum subsp. carotovorum PC1  Bacteria  normal  n/a   
 
 
-
 
NC_012791  Vapar_4185  methyl-accepting chemotaxis sensory transducer  42.4 
 
 
579 aa  304  3.0000000000000004e-81  Variovorax paradoxus S110  Bacteria  normal  0.356775  n/a   
 
 
-
 
NC_011992  Dtpsy_2395  methyl-accepting chemotaxis sensory transducer  42.26 
 
 
572 aa  303  6.000000000000001e-81  Acidovorax ebreus TPSY  Bacteria  normal  n/a   
 
 
-
 
NC_003295  RSc2799  putative methyl-accepting chemotaxis transmembrane protein  52.66 
 
 
515 aa  301  1e-80  Ralstonia solanacearum GMI1000  Bacteria  decreased coverage  0.00825356  normal  0.849966 
 
 
-
 
NC_012857  Rpic12D_4163  methyl-accepting chemotaxis sensory transducer  43.36 
 
 
634 aa  302  1e-80  Ralstonia pickettii 12D  Bacteria  normal  normal 
 
 
-
 
NC_010678  Rpic_4051  methyl-accepting chemotaxis sensory transducer  43.36 
 
 
634 aa  302  1e-80  Ralstonia pickettii 12J  Bacteria  normal  normal 
 
 
-
 
NC_007908  Rfer_3137  methyl-accepting chemotaxis sensory transducer  39.69 
 
 
532 aa  301  1e-80  Rhodoferax ferrireducens T118  Bacteria  normal  0.310324  n/a   
 
 
-
 
NC_007952  Bxe_B2682  methyl-accepting chemotaxis sensory transducer  40.23 
 
 
580 aa  301  2e-80  Burkholderia xenovorans LB400  Bacteria  normal  normal 
 
 
-
 
NC_008782  Ajs_2968  methyl-accepting chemotaxis sensory transducer  42.26 
 
 
572 aa  301  2e-80  Acidovorax sp. JS42  Bacteria  normal  normal  0.536058 
 
 
-
 
NC_010681  Bphyt_2793  methyl-accepting chemotaxis sensory transducer  39.93 
 
 
573 aa  300  4e-80  Burkholderia phytofirmans PsJN  Bacteria  normal  0.22826  normal  0.238924 
 
 
-
 
NC_007952  Bxe_B0771  methyl-accepting chemotaxis sensory transducer  55.59 
 
 
519 aa  300  4e-80  Burkholderia xenovorans LB400  Bacteria  normal  normal 
 
 
-
 
NC_010625  Bphy_5592  methyl-accepting chemotaxis sensory transducer  44.96 
 
 
567 aa  300  5e-80  Burkholderia phymatum STM815  Bacteria  normal  normal 
 
 
-
 
NC_012791  Vapar_4188  methyl-accepting chemotaxis sensory transducer with Cache sensor  59.28 
 
 
566 aa  300  6e-80  Variovorax paradoxus S110  Bacteria  normal  0.210427  n/a   
 
 
-
 
NC_013421  Pecwa_0104  methyl-accepting chemotaxis sensory transducer  39.31 
 
 
548 aa  299  7e-80  Pectobacterium wasabiae WPP163  Bacteria  normal  n/a   
 
 
-
 
NC_013421  Pecwa_0105  methyl-accepting chemotaxis sensory transducer  37.74 
 
 
556 aa  299  9e-80  Pectobacterium wasabiae WPP163  Bacteria  normal  n/a   
 
 
-
 
NC_012857  Rpic12D_4347  methyl-accepting chemotaxis sensory transducer with Cache sensor  57.79 
 
 
513 aa  298  1e-79  Ralstonia pickettii 12D  Bacteria  normal  normal  0.473159 
 
 
-
 
NC_012880  Dd703_3926  methyl-accepting chemotaxis sensory transducer with Cache sensor  52.29 
 
 
665 aa  298  1e-79  Dickeya dadantii Ech703  Bacteria  normal  n/a   
 
 
-
 
NC_010678  Rpic_4237  methyl-accepting chemotaxis sensory transducer  57.79 
 
 
513 aa  298  1e-79  Ralstonia pickettii 12J  Bacteria  normal  normal 
 
 
-
 
NC_007908  Rfer_1480  methyl-accepting chemotaxis sensory transducer  38.97 
 
 
537 aa  298  2e-79  Rhodoferax ferrireducens T118  Bacteria  normal  0.201713  n/a   
 
 
-
 
NC_007953  Bxe_C0847  methyl-accepting chemotaxis sensory transducer  55.45 
 
 
516 aa  298  2e-79  Burkholderia xenovorans LB400  Bacteria  normal  normal  0.024141 
 
 
-
 
NC_010622  Bphy_1586  methyl-accepting chemotaxis sensory transducer  54.21 
 
 
553 aa  298  2e-79  Burkholderia phymatum STM815  Bacteria  normal  normal 
 
 
-
 
NC_008782  Ajs_3772  methyl-accepting chemotaxis sensory transducer  40.27 
 
 
586 aa  296  8e-79  Acidovorax sp. JS42  Bacteria  normal  0.167359  normal 
 
 
-
 
NC_007908  Rfer_2481  methyl-accepting chemotaxis sensory transducer  53.7 
 
 
579 aa  295  1e-78  Rhodoferax ferrireducens T118  Bacteria  normal  0.37743  n/a   
 
 
-
 
NC_010002  Daci_4414  methyl-accepting chemotaxis sensory transducer  53.04 
 
 
518 aa  294  3e-78  Delftia acidovorans SPH-1  Bacteria  normal  0.684904  normal 
 
 
-
 
NC_008752  Aave_2643  methyl-accepting chemotaxis sensory transducer  54.9 
 
 
541 aa  294  3e-78  Acidovorax citrulli AAC00-1  Bacteria  normal  0.0238907  normal  0.0164957 
 
 
-
 
NC_007348  Reut_B4001  histidine kinase, HAMP region: chemotaxis sensory transducer  50.29 
 
 
585 aa  293  4e-78  Ralstonia eutropha JMP134  Bacteria  normal  0.0946714  n/a   
 
 
-
 
NC_012880  Dd703_1514  methyl-accepting chemotaxis sensory transducer  48.94 
 
 
562 aa  293  4e-78  Dickeya dadantii Ech703  Bacteria  normal  0.957025  n/a   
 
 
-
 
NC_007404  Tbd_1622  methyl-accepting chemotaxis sensory transducer  53.14 
 
 
572 aa  293  5e-78  Thiobacillus denitrificans ATCC 25259  Bacteria  normal  0.415216  normal 
 
 
-
 
NC_007908  Rfer_2225  methyl-accepting chemotaxis sensory transducer  44.74 
 
 
583 aa  293  5e-78  Rhodoferax ferrireducens T118  Bacteria  normal  0.220406  n/a   
 
 
-
 
NC_007963  Csal_2019  methyl-accepting chemotaxis sensory transducer  45.73 
 
 
567 aa  293  5e-78  Chromohalobacter salexigens DSM 3043  Bacteria  normal  n/a   
 
 
-
 
NC_003296  RS04782  methyl-accepting chemotaxis transducer transmembrane protein  37.02 
 
 
543 aa  291  1e-77  Ralstonia solanacearum GMI1000  Bacteria  normal  normal 
 
 
-
 
NC_007908  Rfer_2507  methyl-accepting chemotaxis sensory transducer  39.63 
 
 
589 aa  291  1e-77  Rhodoferax ferrireducens T118  Bacteria  normal  0.197123  n/a   
 
 
-
 
NC_007908  Rfer_2749  methyl-accepting chemotaxis sensory transducer  51.07 
 
 
578 aa  292  1e-77  Rhodoferax ferrireducens T118  Bacteria  normal  0.274613  n/a   
 
 
-
 
NC_007974  Rmet_5612  methyl-accepting chemotaxis protein II  48.11 
 
 
513 aa  291  1e-77  Cupriavidus metallidurans CH34  Bacteria  normal  normal 
 
 
-
 
NC_012912  Dd1591_1542  methyl-accepting chemotaxis sensory transducer  51.2 
 
 
566 aa  291  2e-77  Dickeya zeae Ech1591  Bacteria  normal  0.350049  n/a   
 
 
-
 
NC_007947  Mfla_2154  methyl-accepting chemotaxis sensory transducer  53.17 
 
 
569 aa  291  2e-77  Methylobacillus flagellatus KT  Bacteria  normal  normal 
 
 
-
 
NC_008060  Bcen_0963  methyl-accepting chemotaxis sensory transducer  43.23 
 
 
557 aa  291  2e-77  Burkholderia cenocepacia AU 1054  Bacteria  normal  0.0423677  n/a   
 
 
-
 
NC_013421  Pecwa_0006  methyl-accepting chemotaxis sensory transducer with Cache sensor  51.6 
 
 
667 aa  291  3e-77  Pectobacterium wasabiae WPP163  Bacteria  normal  n/a   
 
 
-
 
NC_010681  Bphyt_3813  methyl-accepting chemotaxis sensory transducer  40.52 
 
 
617 aa  290  4e-77  Burkholderia phytofirmans PsJN  Bacteria  normal  normal 
 
 
-
 
NC_007348  Reut_B5230  methyl-accepting chemotaxis sensory transducer  55.81 
 
 
518 aa  290  4e-77  Ralstonia eutropha JMP134  Bacteria  normal  0.530292  n/a   
 
 
-
 
NC_007404  Tbd_1619  chemotaxis sensory transducer  54.72 
 
 
559 aa  290  4e-77  Thiobacillus denitrificans ATCC 25259  Bacteria  normal  0.940607  normal  0.203143 
 
 
-
 
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