More than 300 homologs were found in PanDaTox collection
for query gene Namu_4276 on replicon NC_013235
Organism: Nakamurella multipartita DSM 44233



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_013235  Namu_4276  carbamoyl-phosphate synthase, small subunit  100 
 
 
404 aa  809    Nakamurella multipartita DSM 44233  Bacteria  normal  normal  0.381159 
 
 
-
 
NC_008578  Acel_1299  carbamoyl phosphate synthase small subunit  63.97 
 
 
395 aa  480  1e-134  Acidothermus cellulolyticus 11B  Bacteria  normal  0.161991  hitchhiker  0.00596115 
 
 
-
 
NC_013131  Caci_2404  carbamoyl-phosphate synthase, small subunit  62.2 
 
 
392 aa  472  1e-132  Catenulispora acidiphila DSM 44928  Bacteria  normal  normal 
 
 
-
 
NC_009077  Mjls_2407  carbamoyl phosphate synthase small subunit  62.04 
 
 
387 aa  472  1e-132  Mycobacterium sp. JLS  Bacteria  normal  0.263156  normal 
 
 
-
 
NC_008146  Mmcs_2366  carbamoyl phosphate synthase small subunit  62.04 
 
 
387 aa  472  1e-132  Mycobacterium sp. MCS  Bacteria  normal  0.122091  n/a   
 
 
-
 
NC_008705  Mkms_2413  carbamoyl phosphate synthase small subunit  62.04 
 
 
387 aa  472  1e-132  Mycobacterium sp. KMS  Bacteria  normal  normal  0.199018 
 
 
-
 
NC_013169  Ksed_12680  carbamoyl-phosphate synthase small subunit  60.86 
 
 
423 aa  468  1.0000000000000001e-131  Kytococcus sedentarius DSM 20547  Bacteria  normal  0.20639  normal  0.0925455 
 
 
-
 
NC_008726  Mvan_2663  carbamoyl phosphate synthase small subunit  61.52 
 
 
376 aa  469  1.0000000000000001e-131  Mycobacterium vanbaalenii PYR-1  Bacteria  normal  normal 
 
 
-
 
NC_009565  TBFG_11412  carbamoyl phosphate synthase small subunit  63.71 
 
 
376 aa  470  1.0000000000000001e-131  Mycobacterium tuberculosis F11  Bacteria  hitchhiker  0.00978215  normal  0.266084 
 
 
-
 
NC_009338  Mflv_3744  carbamoyl phosphate synthase small subunit  59.74 
 
 
387 aa  465  9.999999999999999e-131  Mycobacterium gilvum PYR-GCK  Bacteria  normal  0.36566  normal  0.0290185 
 
 
-
 
NC_013441  Gbro_2339  carbamoyl-phosphate synthase, small subunit  61.13 
 
 
378 aa  466  9.999999999999999e-131  Gordonia bronchialis DSM 43247  Bacteria  normal  n/a   
 
 
-
 
NC_009380  Strop_1855  carbamoyl-phosphate synthase, small subunit  62.89 
 
 
386 aa  462  1e-129  Salinispora tropica CNB-440  Bacteria  normal  0.459247  normal 
 
 
-
 
NC_013093  Amir_5242  carbamoyl-phosphate synthase, small subunit  61.84 
 
 
370 aa  463  1e-129  Actinosynnema mirum DSM 43827  Bacteria  normal  n/a   
 
 
-
 
NC_013757  Gobs_3133  carbamoyl-phosphate synthase, small subunit  60.35 
 
 
388 aa  458  9.999999999999999e-129  Geodermatophilus obscurus DSM 43160  Bacteria  normal  0.266223  n/a   
 
 
-
 
NC_009953  Sare_1848  carbamoyl-phosphate synthase, small subunit  62.27 
 
 
386 aa  459  9.999999999999999e-129  Salinispora arenicola CNS-205  Bacteria  normal  0.293096  normal 
 
 
-
 
NC_008541  Arth_2263  carbamoyl phosphate synthase small subunit  57.6 
 
 
420 aa  461  9.999999999999999e-129  Arthrobacter sp. FB24  Bacteria  normal  0.181479  n/a   
 
 
-
 
NC_014210  Ndas_3103  carbamoyl-phosphate synthase, small subunit  62.72 
 
 
397 aa  456  1e-127  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  0.450122  normal 
 
 
-
 
NC_014158  Tpau_2582  carbamoyl-phosphate synthase, small subunit  58.59 
 
 
378 aa  454  1.0000000000000001e-126  Tsukamurella paurometabola DSM 20162  Bacteria  normal  0.659057  n/a   
 
 
-
 
NC_012803  Mlut_12590  carbamoyl-phosphate synthase small subunit  61.35 
 
 
394 aa  454  1.0000000000000001e-126  Micrococcus luteus NCTC 2665  Bacteria  normal  0.188848  n/a   
 
 
-
 
NC_011886  Achl_2000  carbamoyl phosphate synthase small subunit  59.22 
 
 
428 aa  454  1.0000000000000001e-126  Arthrobacter chlorophenolicus A6  Bacteria  n/a    hitchhiker  0.0000000251671 
 
 
-
 
NC_013159  Svir_15580  carbamoyl-phosphate synthase small subunit  59.27 
 
 
378 aa  448  1e-125  Saccharomonospora viridis DSM 43017  Bacteria  normal  normal 
 
 
-
 
NC_013521  Sked_17990  carbamoyl-phosphate synthase small subunit  60.3 
 
 
420 aa  449  1e-125  Sanguibacter keddieii DSM 10542  Bacteria  normal  normal 
 
 
-
 
NC_009664  Krad_3002  carbamoyl phosphate synthase small subunit  57.57 
 
 
397 aa  447  1.0000000000000001e-124  Kineococcus radiotolerans SRS30216  Bacteria  normal  normal  0.541041 
 
 
-
 
NC_010816  BLD_0084  carbamoyl phosphate synthase small subunit  57 
 
 
407 aa  438  9.999999999999999e-123  Bifidobacterium longum DJO10A  Bacteria  normal  n/a   
 
 
-
 
NC_013530  Xcel_1711  carbamoyl-phosphate synthase, small subunit  58.85 
 
 
413 aa  441  9.999999999999999e-123  Xylanimonas cellulosilytica DSM 15894  Bacteria  normal  0.0172822  n/a   
 
 
-
 
NC_013721  HMPREF0424_0918  carbamoyl-phosphate synthase, small subunit  56.82 
 
 
403 aa  436  1e-121  Gardnerella vaginalis 409-05  Bacteria  n/a    normal 
 
 
-
 
NC_013510  Tcur_3013  carbamoyl-phosphate synthase, small subunit  60.31 
 
 
377 aa  437  1e-121  Thermomonospora curvata DSM 43183  Bacteria  normal  0.225095  n/a   
 
 
-
 
NC_013947  Snas_3152  carbamoyl-phosphate synthase small subunit  56.1 
 
 
412 aa  434  1e-120  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  0.322749  hitchhiker  0.000625968 
 
 
-
 
NC_014165  Tbis_1354  carbamoyl-phosphate synthase small subunit  59.16 
 
 
372 aa  433  1e-120  Thermobispora bispora DSM 43833  Bacteria  normal  normal  0.0370749 
 
 
-
 
NC_013595  Sros_2807  Carbamoyl-phosphate synthase (glutamine- hydrolyzing)  58.53 
 
 
400 aa  432  1e-120  Streptosporangium roseum DSM 43021  Bacteria  normal  normal 
 
 
-
 
NC_008699  Noca_2430  carbamoyl phosphate synthase small subunit  58.02 
 
 
378 aa  432  1e-120  Nocardioides sp. JS614  Bacteria  normal  n/a   
 
 
-
 
NC_013174  Jden_1322  carbamoyl-phosphate synthase, small subunit  57.07 
 
 
414 aa  431  1e-119  Jonesia denitrificans DSM 20603  Bacteria  normal  normal  0.125881 
 
 
-
 
NC_009921  Franean1_1709  carbamoyl phosphate synthase small subunit  59.27 
 
 
397 aa  429  1e-119  Frankia sp. EAN1pec  Bacteria  normal  0.0706412  normal  0.0202078 
 
 
-
 
NC_007333  Tfu_1056  carbamoyl-phosphate synthase small subunit  58.94 
 
 
416 aa  427  1e-118  Thermobifida fusca YX  Bacteria  normal  0.964387  n/a   
 
 
-
 
NC_013172  Bfae_14760  carbamoyl-phosphate synthase small subunit  56.4 
 
 
402 aa  420  1e-116  Brachybacterium faecium DSM 4810  Bacteria  normal  0.865636  n/a   
 
 
-
 
NC_014151  Cfla_1845  carbamoyl-phosphate synthase, small subunit  56.09 
 
 
405 aa  417  9.999999999999999e-116  Cellulomonas flavigena DSM 20109  Bacteria  normal  normal  0.295776 
 
 
-
 
NC_007777  Francci3_3199  carbamoyl phosphate synthase small subunit  56.52 
 
 
421 aa  417  9.999999999999999e-116  Frankia sp. CcI3  Bacteria  decreased coverage  0.00261776  normal 
 
 
-
 
NC_012669  Bcav_2037  carbamoyl-phosphate synthase, small subunit  57.18 
 
 
405 aa  406  1.0000000000000001e-112  Beutenbergia cavernae DSM 12333  Bacteria  normal  normal  0.0185668 
 
 
-
 
NC_009523  RoseRS_4055  carbamoyl-phosphate synthase, small subunit  53.05 
 
 
386 aa  346  5e-94  Roseiflexus sp. RS-1  Bacteria  normal  0.103191  normal 
 
 
-
 
NC_009767  Rcas_3359  carbamoyl-phosphate synthase, small subunit  52.42 
 
 
386 aa  342  8e-93  Roseiflexus castenholzii DSM 13941  Bacteria  normal  0.663891  normal 
 
 
-
 
NC_008312  Tery_2310  carbamoyl phosphate synthase small subunit  46.45 
 
 
384 aa  337  1.9999999999999998e-91  Trichodesmium erythraeum IMS101  Bacteria  normal  normal  0.162276 
 
 
-
 
NC_013889  TK90_0698  carbamoyl-phosphate synthase, small subunit  46.48 
 
 
377 aa  331  1e-89  Thioalkalivibrio sp. K90mix  Bacteria  normal  normal  0.110228 
 
 
-
 
NC_010483  TRQ2_0379  carbamoyl phosphate synthase small subunit  44.9 
 
 
392 aa  330  3e-89  Thermotoga sp. RQ2  Bacteria  normal  n/a   
 
 
-
 
NC_009486  Tpet_0362  carbamoyl phosphate synthase small subunit  44.9 
 
 
392 aa  330  4e-89  Thermotoga petrophila RKU-1  Bacteria  normal  0.0108123  n/a   
 
 
-
 
NC_009253  Dred_1683  carbamoyl-phosphate synthase, small subunit  46.77 
 
 
359 aa  329  5.0000000000000004e-89  Desulfotomaculum reducens MI-1  Bacteria  hitchhiker  0.0000104913  n/a   
 
 
-
 
NC_011901  Tgr7_0975  carbamoyl-phosphate synthase, small subunit  46.06 
 
 
379 aa  328  9e-89  Thioalkalivibrio sp. HL-EbGR7  Bacteria  normal  n/a   
 
 
-
 
NC_010717  PXO_00088  carbamoyl phosphate synthase small subunit  45.73 
 
 
390 aa  328  9e-89  Xanthomonas oryzae pv. oryzae PXO99A  Bacteria  normal  0.562291  n/a   
 
 
-
 
NC_013385  Adeg_0372  carbamoyl-phosphate synthase, small subunit  47.38 
 
 
359 aa  327  2.0000000000000001e-88  Ammonifex degensii KC4  Bacteria  normal  0.386907  n/a   
 
 
-
 
NC_014248  Aazo_2282  carbamoyl-phosphate synthase small subunit  45.75 
 
 
385 aa  322  5e-87  'Nostoc azollae' 0708  Bacteria  normal  0.332421  n/a   
 
 
-
 
NC_010513  Xfasm12_0451  carbamoyl phosphate synthase small subunit  44.81 
 
 
399 aa  320  1.9999999999999998e-86  Xylella fastidiosa M12  Bacteria  normal  0.758109  n/a   
 
 
-
 
NC_011071  Smal_1811  carbamoyl phosphate synthase small subunit  45.36 
 
 
393 aa  321  1.9999999999999998e-86  Stenotrophomonas maltophilia R551-3  Bacteria  normal  normal  0.0542874 
 
 
-
 
NC_011726  PCC8801_0381  carbamoyl phosphate synthase small subunit  44.84 
 
 
380 aa  320  3e-86  Cyanothece sp. PCC 8801  Bacteria  n/a    n/a   
 
 
-
 
NC_013161  Cyan8802_0390  carbamoyl phosphate synthase small subunit  44.84 
 
 
380 aa  320  3e-86  Cyanothece sp. PCC 8802  Bacteria  normal  normal 
 
 
-
 
NC_007604  Synpcc7942_2122  carbamoyl phosphate synthase small subunit  47.18 
 
 
391 aa  320  3e-86  Synechococcus elongatus PCC 7942  Bacteria  normal  normal  0.618886 
 
 
-
 
NC_011312  VSAL_I0585  carbamoyl phosphate synthase small subunit  44.78 
 
 
384 aa  318  7e-86  Aliivibrio salmonicida LFI1238  Bacteria  normal  0.0152244  n/a   
 
 
-
 
NC_007413  Ava_4410  carbamoyl phosphate synthase small subunit  46 
 
 
388 aa  318  7.999999999999999e-86  Anabaena variabilis ATCC 29413  Bacteria  normal  normal  0.924948 
 
 
-
 
NC_010655  Amuc_1250  carbamoyl-phosphate synthase, small subunit  46.33 
 
 
372 aa  318  9e-86  Akkermansia muciniphila ATCC BAA-835  Bacteria  normal  normal 
 
 
-
 
NC_007298  Daro_0938  carbamoyl-phosphate synthase small subunit  46.46 
 
 
385 aa  317  2e-85  Dechloromonas aromatica RCB  Bacteria  normal  0.742428  normal 
 
 
-
 
NC_008554  Sfum_0009  carbamoyl phosphate synthase small subunit  45.8 
 
 
391 aa  316  4e-85  Syntrophobacter fumaroxidans MPOB  Bacteria  normal  0.35972  normal 
 
 
-
 
NC_009675  Anae109_2191  carbamoyl phosphate synthase small subunit  47.98 
 
 
372 aa  316  5e-85  Anaeromyxobacter sp. Fw109-5  Bacteria  normal  normal  0.352304 
 
 
-
 
NC_011884  Cyan7425_1942  carbamoyl phosphate synthase small subunit  44.44 
 
 
389 aa  316  5e-85  Cyanothece sp. PCC 7425  Bacteria  normal  0.230816  normal  0.202912 
 
 
-
 
NC_010577  XfasM23_0392  carbamoyl phosphate synthase small subunit  44.76 
 
 
399 aa  315  8e-85  Xylella fastidiosa M23  Bacteria  normal  0.166847  n/a   
 
 
-
 
NC_011729  PCC7424_3196  carbamoyl phosphate synthase small subunit  45.29 
 
 
379 aa  315  8e-85  Cyanothece sp. PCC 7424  Bacteria  n/a    normal  0.0368063 
 
 
-
 
NC_012917  PC1_3648  carbamoyl phosphate synthase small subunit  45.11 
 
 
382 aa  315  9e-85  Pectobacterium carotovorum subsp. carotovorum PC1  Bacteria  normal  0.48497  n/a   
 
 
-
 
NC_011205  SeD_A0072  carbamoyl phosphate synthase small subunit  44.58 
 
 
382 aa  314  1.9999999999999998e-84  Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853  Bacteria  normal  0.399436  normal  0.955538 
 
 
-
 
NC_007512  Plut_0156  carbamoyl phosphate synthase small subunit  44.22 
 
 
369 aa  314  1.9999999999999998e-84  Chlorobium luteolum DSM 273  Bacteria  normal  0.983052  normal  0.416855 
 
 
-
 
NC_012560  Avin_42940  carbamoyl phosphate synthase small subunit  43.86 
 
 
378 aa  314  1.9999999999999998e-84  Azotobacter vinelandii DJ  Bacteria  normal  n/a   
 
 
-
 
NC_011094  SeSA_A0074  carbamoyl phosphate synthase small subunit  44.58 
 
 
382 aa  313  2.9999999999999996e-84  Salmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633  Bacteria  normal  normal 
 
 
-
 
NC_010531  Pnec_0848  carbamoyl-phosphate synthase, small subunit  44.22 
 
 
398 aa  313  2.9999999999999996e-84  Polynucleobacter necessarius subsp. necessarius STIR1  Bacteria  normal  normal  0.287672 
 
 
-
 
NC_009656  PSPA7_5478  carbamoyl phosphate synthase small subunit  44.36 
 
 
378 aa  313  2.9999999999999996e-84  Pseudomonas aeruginosa PA7  Bacteria  normal  n/a   
 
 
-
 
NC_011083  SeHA_C0070  carbamoyl phosphate synthase small subunit  44.78 
 
 
391 aa  313  2.9999999999999996e-84  Salmonella enterica subsp. enterica serovar Heidelberg str. SL476  Bacteria  normal  normal 
 
 
-
 
NC_011149  SeAg_B0073  carbamoyl phosphate synthase small subunit  44.58 
 
 
382 aa  313  3.9999999999999997e-84  Salmonella enterica subsp. enterica serovar Agona str. SL483  Bacteria  normal  n/a   
 
 
-
 
NC_011080  SNSL254_A0070  carbamoyl phosphate synthase small subunit  44.58 
 
 
382 aa  313  3.9999999999999997e-84  Salmonella enterica subsp. enterica serovar Newport str. SL254  Bacteria  normal  normal 
 
 
-
 
NC_008340  Mlg_1982  carbamoyl-phosphate synthase small subunit  45.64 
 
 
386 aa  312  4.999999999999999e-84  Alkalilimnicola ehrlichii MLHE-1  Bacteria  normal  0.157941  normal  0.0125598 
 
 
-
 
NC_009076  BURPS1106A_1505  carbamoyl phosphate synthase small subunit  45.41 
 
 
381 aa  312  5.999999999999999e-84  Burkholderia pseudomallei 1106a  Bacteria  normal  0.188244  n/a   
 
 
-
 
NC_007614  Nmul_A0478  carbamoyl-phosphate synthase, small subunit  46.56 
 
 
383 aa  312  5.999999999999999e-84  Nitrosospira multiformis ATCC 25196  Bacteria  normal  n/a   
 
 
-
 
NC_009074  BURPS668_1475  carbamoyl phosphate synthase small subunit  45.41 
 
 
381 aa  312  7.999999999999999e-84  Burkholderia pseudomallei 668  Bacteria  normal  n/a   
 
 
-
 
NC_008836  BMA10229_A0587  carbamoyl phosphate synthase small subunit  45.41 
 
 
381 aa  312  7.999999999999999e-84  Burkholderia mallei NCTC 10229  Bacteria  normal  0.368687  n/a   
 
 
-
 
NC_006348  BMA0770  carbamoyl phosphate synthase small subunit  45.41 
 
 
381 aa  312  7.999999999999999e-84  Burkholderia mallei ATCC 23344  Bacteria  normal  0.76287  n/a   
 
 
-
 
NC_009080  BMA10247_0564  carbamoyl phosphate synthase small subunit  45.41 
 
 
381 aa  312  7.999999999999999e-84  Burkholderia mallei NCTC 10247  Bacteria  normal  n/a   
 
 
-
 
NC_008785  BMASAVP1_A1281  carbamoyl phosphate synthase small subunit  45.41 
 
 
381 aa  312  7.999999999999999e-84  Burkholderia mallei SAVP1  Bacteria  normal  0.697849  n/a   
 
 
-
 
NC_009943  Dole_0120  carbamoyl-phosphate synthase, small subunit  47.37 
 
 
380 aa  311  9e-84  Desulfococcus oleovorans Hxd3  Bacteria  normal  n/a   
 
 
-
 
NC_007434  BURPS1710b_1608  carbamoyl phosphate synthase small subunit  45.41 
 
 
381 aa  311  1e-83  Burkholderia pseudomallei 1710b  Bacteria  normal  n/a   
 
 
-
 
NC_009379  Pnuc_1019  carbamoyl-phosphate synthase, small subunit  44.55 
 
 
397 aa  311  1e-83  Polynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1  Bacteria  normal  n/a   
 
 
-
 
NC_008463  PA14_62930  carbamoyl phosphate synthase small subunit  43.86 
 
 
378 aa  311  1e-83  Pseudomonas aeruginosa UCBPP-PA14  Bacteria  normal  normal 
 
 
-
 
CP001509  ECD_00036  carbamoyl-phosphate synthase small subunit  44.58 
 
 
382 aa  310  2e-83  Escherichia coli BL21(DE3)  Bacteria  normal  0.53844  n/a   
 
 
-
 
CP001637  EcDH1_3567  carbamoyl-phosphate synthase, small subunit  44.58 
 
 
382 aa  310  2e-83  Escherichia coli DH1  Bacteria  normal  n/a   
 
 
-
 
NC_002947  PP_4724  carbamoyl phosphate synthase small subunit  44.22 
 
 
378 aa  311  2e-83  Pseudomonas putida KT2440  Bacteria  normal  0.103863  hitchhiker  0.00276318 
 
 
-
 
NC_010524  Lcho_2823  carbamoyl-phosphate synthase, small subunit  45.05 
 
 
394 aa  310  2e-83  Leptothrix cholodnii SP-6  Bacteria  n/a    normal 
 
 
-
 
NC_010468  EcolC_3623  carbamoyl phosphate synthase small subunit  44.58 
 
 
382 aa  311  2e-83  Escherichia coli ATCC 8739  Bacteria  normal  normal  0.314254 
 
 
-
 
NC_009800  EcHS_A0035  carbamoyl phosphate synthase small subunit  44.58 
 
 
382 aa  310  2e-83  Escherichia coli HS  Bacteria  normal  n/a   
 
 
-
 
NC_010658  SbBS512_E0036  carbamoyl phosphate synthase small subunit  44.58 
 
 
382 aa  310  2e-83  Shigella boydii CDC 3083-94  Bacteria  normal  n/a   
 
 
-
 
NC_009801  EcE24377A_0033  carbamoyl phosphate synthase small subunit  44.58 
 
 
382 aa  310  2e-83  Escherichia coli E24377A  Bacteria  normal  n/a   
 
 
-
 
NC_012892  B21_00035  hypothetical protein  44.58 
 
 
382 aa  310  2e-83  Escherichia coli BL21  Bacteria  normal  0.457385  n/a   
 
 
-
 
NC_010322  PputGB1_4725  carbamoyl phosphate synthase small subunit  44.22 
 
 
378 aa  311  2e-83  Pseudomonas putida GB-1  Bacteria  normal  normal 
 
 
-
 
NC_011353  ECH74115_0035  carbamoyl phosphate synthase small subunit  44.58 
 
 
382 aa  310  2e-83  Escherichia coli O157:H7 str. EC4115  Bacteria  normal  normal 
 
 
-
 
NC_008700  Sama_2504  carbamoyl phosphate synthase small subunit  44.08 
 
 
381 aa  310  2.9999999999999997e-83  Shewanella amazonensis SB2B  Bacteria  normal  0.323519  normal 
 
 
-
 
NC_010498  EcSMS35_0032  carbamoyl phosphate synthase small subunit  44.78 
 
 
391 aa  309  4e-83  Escherichia coli SMS-3-5  Bacteria  normal  normal 
 
 
-
 
NC_007651  BTH_I2783  carbamoyl phosphate synthase small subunit  44.9 
 
 
381 aa  310  4e-83  Burkholderia thailandensis E264  Bacteria  normal  0.259596  n/a   
 
 
-
 
NC_009512  Pput_4590  carbamoyl phosphate synthase small subunit  43.97 
 
 
386 aa  309  5.9999999999999995e-83  Pseudomonas putida F1  Bacteria  normal  normal  0.740896 
 
 
-
 
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