| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PP_4724 |
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| Symbol | carA |
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| ID | 1041946 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida KT2440 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_002947 |
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| Strand | - |
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| Start bp | 5372031 |
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| End bp | 5373167 |
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| Gene Length | 1137 bp |
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| Protein Length | 378 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 637148128 |
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| Product | carbamoyl phosphate synthase small subunit |
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| Protein accession | NP_746832 |
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| Protein GI | 26991407 |
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| COG category | [E] Amino acid transport and metabolism
[F] Nucleotide transport and metabolism |
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| COG ID | [COG0505] Carbamoylphosphate synthase small subunit |
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| TIGRFAM ID | [TIGR01368] carbamoyl-phosphate synthase, small subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.103863 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 5 |
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| Fosmid unclonability p-value | 0.00276318 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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| |
Sequence |
| Gene sequence | TTGACAAAGC CAGCCATACT CGCCCTTGCC GACGGCAGTA TTTTCCGCGG TGAAGCCATC
GGTGCCGACG GTCAGACCGT TGGTGAGGTG GTATTCAACA CCGCTATGAC CGGCTACCAG
GAAATCCTTA CAGACCCTTC CTACGCGCAG CAAATCGTTA CCCTGACCTA CCCGCACATC
GGCAACACCG GTACTACCCC GGAAGACGCC GAGTCGAGCC GCGTCTGGTC CGCTGGCCTG
GTCATCCGTG ACCTGCCGCT GCTGGCCAGC AACTGGCGTA ACACCCAGTC GCTGCCTGAG
TACCTCAAGG CCAACAACGT CGTCGCCATC GCCGGCATCG ACACCCGTCG CCTGACCCGT
ATCCTGCGTG AAAAGGGCGC CCAGAACGGC TGCATTCTGG CGGGTGACAA CATCAGCGAA
GAAGCTGCCA TCGCTGCTGC CCGCGGCTTC CCGGGCCTGA AGGGCATGGA CCTGGCCAAG
GTCGTCTCCA CCAAGGAACG TTACGAGTGG CGCTCCAGCG TGTGGGAGCT GAAAACCGAC
AGCCACCCGA CCATCGACGC TGCCGACCTG CCGTACCACG TGGTTGCCTT CGACTATGGC
GTCAAGCTGA ACATCCTGCG CATGCTGGTG GCCCGCGGCT GCCGCGTGAC CGTGGTACCA
GCCCAGACCC CGGCCAGCGA AGTACTGGCA CTCAACCCGG ACGGCGTGTT CCTGTCCAAC
GGCCCTGGTG ACCCTGAGCC GTGCGACTAC GCGATCCAGG CGATCAAGGA AATCCTCGAA
ACCGAGATCC CGGTATTCGG CATCTGCCTC GGCCACCAGC TGCTGGCCCT GGCGTCCGGC
GCCAAGACCG TGAAAATGGG CCACGGCCAC CACGGTGCCA ACCACCCGGT CCAGGACCTG
GATACTGGTG TGGTCATGAT CACCAGCCAG AACCACGGTT TCGCCGTTGA CGAGGCGACC
CTGCCGGGCA ACGTTCGCGC CATTCACAAG TCGCTGTTCG ACGGCACCCT GCAGGGTATC
GAGCGTACCG ACAAGAGCGC GTTCAGCTTC CAGGGCCACC CTGAAGCGAG CCCGGGCCCG
ACCGACGTCG CGCCTCTGTT CGATCGTTTC ACCGATGCCA TGGCCAAGCG CCGCTGA
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| Protein sequence | MTKPAILALA DGSIFRGEAI GADGQTVGEV VFNTAMTGYQ EILTDPSYAQ QIVTLTYPHI
GNTGTTPEDA ESSRVWSAGL VIRDLPLLAS NWRNTQSLPE YLKANNVVAI AGIDTRRLTR
ILREKGAQNG CILAGDNISE EAAIAAARGF PGLKGMDLAK VVSTKERYEW RSSVWELKTD
SHPTIDAADL PYHVVAFDYG VKLNILRMLV ARGCRVTVVP AQTPASEVLA LNPDGVFLSN
GPGDPEPCDY AIQAIKEILE TEIPVFGICL GHQLLALASG AKTVKMGHGH HGANHPVQDL
DTGVVMITSQ NHGFAVDEAT LPGNVRAIHK SLFDGTLQGI ERTDKSAFSF QGHPEASPGP
TDVAPLFDRF TDAMAKRR
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