More than 300 homologs were found in PanDaTox collection
for query gene Mflv_4353 on replicon NC_009338
Organism: Mycobacterium gilvum PYR-GCK



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_009338  Mflv_4353  short-chain dehydrogenase/reductase SDR  100 
 
 
265 aa  527  1e-149  Mycobacterium gilvum PYR-GCK  Bacteria  normal  normal 
 
 
-
 
NC_008726  Mvan_1991  short-chain dehydrogenase/reductase SDR  92.83 
 
 
265 aa  469  1.0000000000000001e-131  Mycobacterium vanbaalenii PYR-1  Bacteria  normal  0.99032  normal 
 
 
-
 
NC_008146  Mmcs_1772  short-chain dehydrogenase/reductase SDR  76.98 
 
 
265 aa  392  1e-108  Mycobacterium sp. MCS  Bacteria  normal  0.29615  n/a   
 
 
-
 
NC_008705  Mkms_1819  short-chain dehydrogenase/reductase SDR  76.98 
 
 
265 aa  392  1e-108  Mycobacterium sp. KMS  Bacteria  normal  normal 
 
 
-
 
NC_009077  Mjls_1753  short-chain dehydrogenase/reductase SDR  76.6 
 
 
265 aa  389  1e-107  Mycobacterium sp. JLS  Bacteria  normal  normal 
 
 
-
 
NC_009921  Franean1_6397  short-chain dehydrogenase/reductase SDR  63.86 
 
 
248 aa  303  2.0000000000000002e-81  Frankia sp. EAN1pec  Bacteria  normal  0.291237  normal  0.130468 
 
 
-
 
NC_010322  PputGB1_1794  3-ketoacyl-(acyl-carrier-protein) reductase  35.85 
 
 
257 aa  127  3e-28  Pseudomonas putida GB-1  Bacteria  normal  normal 
 
 
-
 
NC_008391  Bamb_3337  short-chain dehydrogenase/reductase SDR  35.32 
 
 
267 aa  122  8e-27  Burkholderia ambifaria AMMD  Bacteria  normal  normal  0.964929 
 
 
-
 
NC_007005  Psyr_0904  Short-chain dehydrogenase/reductase SDR  36.51 
 
 
254 aa  120  3e-26  Pseudomonas syringae pv. syringae B728a  Bacteria  normal  normal 
 
 
-
 
NC_013525  Tter_0758  short-chain dehydrogenase/reductase SDR  30.53 
 
 
262 aa  118  9e-26  Thermobaculum terrenum ATCC BAA-798  Bacteria  n/a    n/a   
 
 
-
 
NC_013526  Tter_2517  short-chain dehydrogenase/reductase SDR  35.36 
 
 
257 aa  117  1.9999999999999998e-25  Thermobaculum terrenum ATCC BAA-798  Bacteria  normal  0.401645  n/a   
 
 
-
 
NC_012793  GWCH70_0923  short-chain dehydrogenase/reductase SDR  29.81 
 
 
261 aa  117  1.9999999999999998e-25  Geobacillus sp. WCH70  Bacteria  normal  n/a   
 
 
-
 
NC_009636  Smed_3132  short-chain dehydrogenase/reductase SDR  34.12 
 
 
261 aa  117  1.9999999999999998e-25  Sinorhizobium medicae WSM419  Bacteria  normal  normal 
 
 
-
 
NC_009485  BBta_6893  putative 3-oxoacyl-(acyl-carrier-protein) reductase  34.88 
 
 
266 aa  117  1.9999999999999998e-25  Bradyrhizobium sp. BTAi1  Bacteria  hitchhiker  0.00227102  normal  0.0503904 
 
 
-
 
NC_013411  GYMC61_1799  short-chain dehydrogenase/reductase SDR  30.57 
 
 
261 aa  116  3.9999999999999997e-25  Geobacillus sp. Y412MC61  Bacteria  n/a    n/a   
 
 
-
 
NC_013757  Gobs_3777  short-chain dehydrogenase/reductase SDR  33.58 
 
 
262 aa  116  3.9999999999999997e-25  Geodermatophilus obscurus DSM 43160  Bacteria  normal  n/a   
 
 
-
 
NC_004578  PSPTO_1056  oxidoreductase, short chain dehydrogenase/reductase family  36.51 
 
 
254 aa  115  5e-25  Pseudomonas syringae pv. tomato str. DC3000  Bacteria  normal  n/a   
 
 
-
 
NC_013595  Sros_4576  short-chain dehydrogenase/reductase SDR  34.1 
 
 
248 aa  115  8.999999999999998e-25  Streptosporangium roseum DSM 43021  Bacteria  normal  0.716912  normal  0.113643 
 
 
-
 
NC_013411  GYMC61_2516  short-chain dehydrogenase/reductase SDR  37.02 
 
 
256 aa  114  1.0000000000000001e-24  Geobacillus sp. Y412MC61  Bacteria  n/a    n/a   
 
 
-
 
NC_010172  Mext_1326  short-chain dehydrogenase/reductase SDR  36.22 
 
 
254 aa  114  1.0000000000000001e-24  Methylobacterium extorquens PA1  Bacteria  normal  normal  0.393683 
 
 
-
 
NC_009720  Xaut_2759  short-chain dehydrogenase/reductase SDR  35.04 
 
 
261 aa  114  1.0000000000000001e-24  Xanthobacter autotrophicus Py2  Bacteria  normal  normal 
 
 
-
 
NC_007778  RPB_4528  Short-chain dehydrogenase/reductase SDR  34.36 
 
 
258 aa  114  2.0000000000000002e-24  Rhodopseudomonas palustris HaA2  Bacteria  normal  0.831809  normal 
 
 
-
 
NC_007953  Bxe_C0610  putative short-chain dehydrogenase/reductase  31.84 
 
 
286 aa  114  2.0000000000000002e-24  Burkholderia xenovorans LB400  Bacteria  normal  normal  0.0678259 
 
 
-
 
NC_009674  Bcer98_1545  short-chain dehydrogenase/reductase SDR  27.55 
 
 
261 aa  113  2.0000000000000002e-24  Bacillus cytotoxicus NVH 391-98  Bacteria  hitchhiker  0.00435006  n/a   
 
 
-
 
NC_010725  Mpop_4560  short-chain dehydrogenase/reductase SDR  33.82 
 
 
268 aa  114  2.0000000000000002e-24  Methylobacterium populi BJ001  Bacteria  normal  normal  0.62458 
 
 
-
 
NC_011757  Mchl_1526  short-chain dehydrogenase/reductase SDR  35.43 
 
 
254 aa  113  3e-24  Methylobacterium chloromethanicum CM4  Bacteria  normal  normal 
 
 
-
 
NC_008254  Meso_1054  short-chain dehydrogenase/reductase SDR  30.92 
 
 
260 aa  113  4.0000000000000004e-24  Chelativorans sp. BNC1  Bacteria  normal  n/a   
 
 
-
 
NC_008262  CPR_0991  7-alpha-hydroxysteroid dehydrogenase  28.02 
 
 
253 aa  113  4.0000000000000004e-24  Clostridium perfringens SM101  Bacteria  normal  n/a   
 
 
-
 
NC_009921  Franean1_3233  short-chain dehydrogenase/reductase SDR  32.68 
 
 
252 aa  112  6e-24  Frankia sp. EAN1pec  Bacteria  normal  normal 
 
 
-
 
NC_008261  CPF_1154  7-alpha-hydroxysteroid dehydrogenase  27.63 
 
 
253 aa  112  7.000000000000001e-24  Clostridium perfringens ATCC 13124  Bacteria  decreased coverage  0.000294561  n/a   
 
 
-
 
NC_013926  Aboo_0462  short-chain dehydrogenase/reductase SDR  27.41 
 
 
267 aa  112  9e-24  Aciduliprofundum boonei T469  Archaea  normal  n/a   
 
 
-
 
NC_009921  Franean1_3371  short-chain dehydrogenase/reductase SDR  32.17 
 
 
282 aa  111  1.0000000000000001e-23  Frankia sp. EAN1pec  Bacteria  normal  normal 
 
 
-
 
NC_012669  Bcav_1453  short-chain dehydrogenase/reductase SDR  34.23 
 
 
252 aa  111  1.0000000000000001e-23  Beutenbergia cavernae DSM 12333  Bacteria  normal  0.950748  normal 
 
 
-
 
NC_008554  Sfum_0112  short-chain dehydrogenase/reductase SDR  30.83 
 
 
263 aa  110  2.0000000000000002e-23  Syntrophobacter fumaroxidans MPOB  Bacteria  normal  normal 
 
 
-
 
NC_009832  Spro_2063  short-chain dehydrogenase/reductase SDR  33.07 
 
 
251 aa  110  3e-23  Serratia proteamaculans 568  Bacteria  normal  normal 
 
 
-
 
NC_013132  Cpin_5999  short-chain dehydrogenase/reductase SDR  31.18 
 
 
263 aa  110  3e-23  Chitinophaga pinensis DSM 2588  Bacteria  normal  normal 
 
 
-
 
NC_008048  Sala_0883  short-chain dehydrogenase/reductase SDR  29.96 
 
 
264 aa  110  3e-23  Sphingopyxis alaskensis RB2256  Bacteria  normal  normal 
 
 
-
 
NC_010682  Rpic_3415  short-chain dehydrogenase/reductase SDR  31.44 
 
 
262 aa  110  3e-23  Ralstonia pickettii 12J  Bacteria  normal  normal 
 
 
-
 
NC_010338  Caul_1925  short-chain dehydrogenase/reductase SDR  31.2 
 
 
288 aa  110  3e-23  Caulobacter sp. K31  Bacteria  normal  normal 
 
 
-
 
NC_012912  Dd1591_3635  short-chain dehydrogenase/reductase SDR  30.37 
 
 
265 aa  110  3e-23  Dickeya zeae Ech1591  Bacteria  normal  n/a   
 
 
-
 
NC_013172  Bfae_31260  dehydrogenase of unknown specificity, short-chain alcohol dehydrogenase like  33.7 
 
 
266 aa  109  4.0000000000000004e-23  Brachybacterium faecium DSM 4810  Bacteria  normal  0.974628  n/a   
 
 
-
 
NC_009486  Tpet_1580  short-chain dehydrogenase/reductase SDR  31.7 
 
 
237 aa  109  4.0000000000000004e-23  Thermotoga petrophila RKU-1  Bacteria  normal  n/a   
 
 
-
 
NC_008688  Pden_5052  short-chain dehydrogenase/reductase SDR  34.9 
 
 
246 aa  109  5e-23  Paracoccus denitrificans PD1222  Bacteria  normal  normal 
 
 
-
 
NC_011737  PCC7424_5536  short-chain dehydrogenase/reductase SDR  30.62 
 
 
254 aa  109  5e-23  Cyanothece sp. PCC 7424  Bacteria  n/a    normal  0.0819159 
 
 
-
 
NC_009956  Dshi_3903  short-chain dehydrogenase/reductase SDR  31.7 
 
 
265 aa  109  5e-23  Dinoroseobacter shibae DFL 12  Bacteria  normal  normal  0.60133 
 
 
-
 
NC_010085  Nmar_0026  short-chain dehydrogenase/reductase SDR  28.79 
 
 
269 aa  108  7.000000000000001e-23  Nitrosopumilus maritimus SCM1  Archaea  n/a    normal 
 
 
-
 
NC_013739  Cwoe_2839  short-chain dehydrogenase/reductase SDR  37.08 
 
 
261 aa  108  7.000000000000001e-23  Conexibacter woesei DSM 14684  Bacteria  normal  normal 
 
 
-
 
NC_007493  RSP_0610  putative 3-oxoacyl-(acyl-carrier-protein) reductase  33.83 
 
 
268 aa  108  8.000000000000001e-23  Rhodobacter sphaeroides 2.4.1  Bacteria  normal  n/a   
 
 
-
 
NC_010483  TRQ2_1646  short-chain dehydrogenase/reductase SDR  30.42 
 
 
237 aa  108  9.000000000000001e-23  Thermotoga sp. RQ2  Bacteria  normal  n/a   
 
 
-
 
NC_009719  Plav_1678  short-chain dehydrogenase/reductase SDR  31.18 
 
 
255 aa  108  9.000000000000001e-23  Parvibaculum lavamentivorans DS-1  Bacteria  normal  normal  0.157032 
 
 
-
 
NC_008697  Noca_4841  short-chain dehydrogenase/reductase SDR  33.07 
 
 
258 aa  107  1e-22  Nocardioides sp. JS614  Bacteria  normal  0.166683  normal 
 
 
-
 
NC_011145  AnaeK_2852  short-chain dehydrogenase/reductase SDR  37.26 
 
 
256 aa  107  2e-22  Anaeromyxobacter sp. K  Bacteria  normal  n/a   
 
 
-
 
NC_012856  Rpic12D_3069  short-chain dehydrogenase/reductase SDR  31.06 
 
 
278 aa  107  2e-22  Ralstonia pickettii 12D  Bacteria  normal  normal 
 
 
-
 
NC_008340  Mlg_0994  3-ketoacyl-(acyl-carrier-protein) reductase  29.84 
 
 
247 aa  107  2e-22  Alkalilimnicola ehrlichii MLHE-1  Bacteria  normal  0.0983572  normal 
 
 
-
 
NC_011831  Cagg_2985  short-chain dehydrogenase/reductase SDR  32.45 
 
 
248 aa  107  2e-22  Chloroflexus aggregans DSM 9485  Bacteria  normal  0.0207781  normal  0.0184598 
 
 
-
 
NC_013037  Dfer_1833  short-chain dehydrogenase/reductase SDR  29.28 
 
 
263 aa  106  4e-22  Dyadobacter fermentans DSM 18053  Bacteria  normal  0.50771  normal 
 
 
-
 
NC_008025  Dgeo_1963  short-chain dehydrogenase/reductase SDR  33.07 
 
 
245 aa  106  4e-22  Deinococcus geothermalis DSM 11300  Bacteria  normal  normal  0.35981 
 
 
-
 
NC_011004  Rpal_0963  short-chain dehydrogenase/reductase SDR  32.43 
 
 
258 aa  106  5e-22  Rhodopseudomonas palustris TIE-1  Bacteria  normal  n/a   
 
 
-
 
NC_009077  Mjls_1473  short-chain dehydrogenase/reductase SDR  34.62 
 
 
249 aa  106  5e-22  Mycobacterium sp. JLS  Bacteria  normal  0.162054  normal 
 
 
-
 
NC_007413  Ava_0311  Short-chain dehydrogenase/reductase SDR  30.68 
 
 
262 aa  105  6e-22  Anabaena variabilis ATCC 29413  Bacteria  normal  normal 
 
 
-
 
NC_011365  Gdia_0889  short-chain dehydrogenase/reductase SDR  30.69 
 
 
266 aa  105  6e-22  Gluconacetobacter diazotrophicus PAl 5  Bacteria  normal  normal  0.471953 
 
 
-
 
NC_009636  Smed_2459  short-chain dehydrogenase/reductase SDR  32.18 
 
 
264 aa  105  6e-22  Sinorhizobium medicae WSM419  Bacteria  normal  normal 
 
 
-
 
NC_007760  Adeh_2760  short-chain dehydrogenase/reductase SDR  37.4 
 
 
256 aa  105  7e-22  Anaeromyxobacter dehalogenans 2CP-C  Bacteria  hitchhiker  0.0058487  n/a   
 
 
-
 
NC_007925  RPC_3013  short-chain dehydrogenase/reductase SDR  33.46 
 
 
253 aa  104  1e-21  Rhodopseudomonas palustris BisB18  Bacteria  normal  normal  0.47277 
 
 
-
 
NC_013158  Huta_1623  short-chain dehydrogenase/reductase SDR  33.96 
 
 
261 aa  104  1e-21  Halorhabdus utahensis DSM 12940  Archaea  normal  n/a   
 
 
-
 
NC_010505  Mrad2831_3742  short-chain dehydrogenase/reductase SDR  34.5 
 
 
260 aa  104  1e-21  Methylobacterium radiotolerans JCM 2831  Bacteria  normal  normal  0.071685 
 
 
-
 
NC_012792  Vapar_5789  short-chain dehydrogenase/reductase SDR  29.92 
 
 
263 aa  104  1e-21  Variovorax paradoxus S110  Bacteria  normal  n/a   
 
 
-
 
NC_010803  Clim_1887  short-chain dehydrogenase/reductase SDR  26.44 
 
 
250 aa  104  1e-21  Chlorobium limicola DSM 245  Bacteria  normal  n/a   
 
 
-
 
NC_013595  Sros_5202  putative oxidoreductase protein  33.21 
 
 
275 aa  105  1e-21  Streptosporangium roseum DSM 43021  Bacteria  normal  normal  0.633311 
 
 
-
 
NC_010511  M446_1803  short-chain dehydrogenase/reductase SDR  35.16 
 
 
262 aa  103  2e-21  Methylobacterium sp. 4-46  Bacteria  normal  normal  0.225984 
 
 
-
 
NC_012880  Dd703_3521  short-chain dehydrogenase/reductase SDR  30 
 
 
265 aa  103  2e-21  Dickeya dadantii Ech703  Bacteria  normal  n/a   
 
 
-
 
NC_008148  Rxyl_2393  3-ketoacyl-(acyl-carrier-protein) reductase  31.01 
 
 
247 aa  103  2e-21  Rubrobacter xylanophilus DSM 9941  Bacteria  normal  0.114782  n/a   
 
 
-
 
NC_010172  Mext_4079  short-chain dehydrogenase/reductase SDR  34.19 
 
 
268 aa  103  2e-21  Methylobacterium extorquens PA1  Bacteria  normal  0.130432  normal 
 
 
-
 
NC_009380  Strop_2194  short-chain dehydrogenase/reductase SDR  32.68 
 
 
261 aa  104  2e-21  Salinispora tropica CNB-440  Bacteria  normal  0.0761637  normal 
 
 
-
 
NC_013202  Hmuk_1023  short-chain dehydrogenase/reductase SDR  34.57 
 
 
260 aa  103  2e-21  Halomicrobium mukohataei DSM 12286  Archaea  normal  normal  0.24583 
 
 
-
 
NC_004578  PSPTO_2396  oxidoreductase, short chain dehydrogenase/reductase family  31.03 
 
 
266 aa  103  3e-21  Pseudomonas syringae pv. tomato str. DC3000  Bacteria  normal  0.084933  n/a   
 
 
-
 
NC_011757  Mchl_4447  short-chain dehydrogenase/reductase SDR  34.19 
 
 
268 aa  103  3e-21  Methylobacterium chloromethanicum CM4  Bacteria  normal  normal 
 
 
-
 
NC_012793  GWCH70_1779  short-chain dehydrogenase/reductase SDR  29.84 
 
 
254 aa  103  3e-21  Geobacillus sp. WCH70  Bacteria  normal  n/a   
 
 
-
 
NC_013501  Rmar_0816  short-chain dehydrogenase/reductase SDR  33.83 
 
 
271 aa  103  3e-21  Rhodothermus marinus DSM 4252  Bacteria  normal  n/a   
 
 
-
 
NC_013132  Cpin_6697  short-chain dehydrogenase/reductase SDR  29.55 
 
 
264 aa  102  4e-21  Chitinophaga pinensis DSM 2588  Bacteria  normal  normal 
 
 
-
 
NC_011891  A2cp1_2944  short-chain dehydrogenase/reductase SDR  36.64 
 
 
256 aa  103  4e-21  Anaeromyxobacter dehalogenans 2CP-1  Bacteria  normal  n/a   
 
 
-
 
NC_003295  RSc3138  oxidoreductase protein  32.06 
 
 
262 aa  102  5e-21  Ralstonia solanacearum GMI1000  Bacteria  normal  normal 
 
 
-
 
NC_007498  Pcar_1438  3-oxoacyl-(acyl-carrier-protein) reductase  31.91 
 
 
245 aa  102  5e-21  Pelobacter carbinolicus DSM 2380  Bacteria  normal  n/a   
 
 
-
 
NC_007511  Bcep18194_B0563  Short-chain dehydrogenase/reductase SDR  31.91 
 
 
252 aa  102  5e-21  Burkholderia sp. 383  Bacteria  normal  normal 
 
 
-
 
NC_009511  Swit_3068  short-chain dehydrogenase/reductase SDR  33.46 
 
 
253 aa  102  5e-21  Sphingomonas wittichii RW1  Bacteria  normal  normal  0.365942 
 
 
-
 
NC_009972  Haur_3329  3-ketoacyl-(acyl-carrier-protein) reductase  29.67 
 
 
260 aa  102  5e-21  Herpetosiphon aurantiacus ATCC 23779  Bacteria  normal  n/a   
 
 
-
 
NC_008322  Shewmr7_2049  short chain dehydrogenase  32.56 
 
 
275 aa  102  5e-21  Shewanella sp. MR-7  Bacteria  normal  0.0464745  hitchhiker  0.000360099 
 
 
-
 
NC_011666  Msil_3367  short-chain dehydrogenase/reductase SDR  32.56 
 
 
244 aa  102  5e-21  Methylocella silvestris BL2  Bacteria  n/a    normal 
 
 
-
 
NC_013501  Rmar_2036  short-chain dehydrogenase/reductase SDR  31.82 
 
 
258 aa  102  5e-21  Rhodothermus marinus DSM 4252  Bacteria  normal  n/a   
 
 
-
 
NC_007777  Francci3_1239  short-chain dehydrogenase/reductase SDR  32.7 
 
 
259 aa  102  6e-21  Frankia sp. CcI3  Bacteria  normal  normal  0.198291 
 
 
-
 
NC_012850  Rleg_2261  short-chain dehydrogenase/reductase SDR  30.15 
 
 
260 aa  102  6e-21  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  decreased coverage  0.00824711  normal  0.0431071 
 
 
-
 
NC_003295  RSc2186  dehydrogenase/reductase oxidoreductase protein  31.09 
 
 
263 aa  102  7e-21  Ralstonia solanacearum GMI1000  Bacteria  normal  0.158551  normal 
 
 
-
 
NC_007952  Bxe_B2157  putative short-chain dehydrogenase/reductase SDR  30.68 
 
 
252 aa  102  7e-21  Burkholderia xenovorans LB400  Bacteria  normal  0.166791  normal  0.301941 
 
 
-
 
NC_007958  RPD_4287  short-chain dehydrogenase/reductase SDR  32.31 
 
 
253 aa  102  7e-21  Rhodopseudomonas palustris BisB5  Bacteria  normal  hitchhiker  0.00908488 
 
 
-
 
NC_009921  Franean1_4317  short-chain dehydrogenase/reductase SDR  32.55 
 
 
234 aa  102  8e-21  Frankia sp. EAN1pec  Bacteria  normal  0.0991034  normal  0.658106 
 
 
-
 
NC_008726  Mvan_4185  short-chain dehydrogenase/reductase SDR  32.28 
 
 
248 aa  102  8e-21  Mycobacterium vanbaalenii PYR-1  Bacteria  normal  normal 
 
 
-
 
NC_011661  Dtur_0943  3-oxoacyl-(acyl-carrier-protein) reductase  28.3 
 
 
246 aa  102  9e-21  Dictyoglomus turgidum DSM 6724  Bacteria  hitchhiker  0.000752112  n/a   
 
 
-
 
NC_008321  Shewmr4_1929  short chain dehydrogenase  32.56 
 
 
265 aa  101  1e-20  Shewanella sp. MR-4  Bacteria  hitchhiker  0.000156385  unclonable  0.0000000000437203 
 
 
-
 
NC_009376  Pars_0047  short-chain dehydrogenase/reductase SDR  30.38 
 
 
260 aa  101  1e-20  Pyrobaculum arsenaticum DSM 13514  Archaea  normal  normal 
 
 
-
 
NC_013595  Sros_5189  gluconate 5-dehydrogenase (5-keto-D-gluconate 5- reductase)  32.67 
 
 
261 aa  101  1e-20  Streptosporangium roseum DSM 43021  Bacteria  normal  hitchhiker  0.00846982 
 
 
-
 
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