Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | TRQ2_1646 |
Symbol | |
ID | 6093096 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Thermotoga sp. RQ2 |
Kingdom | Bacteria |
Replicon accession | NC_010483 |
Strand | + |
Start bp | 1668545 |
End bp | 1669258 |
Gene Length | 714 bp |
Protein Length | 237 aa |
Translation table | 11 |
GC content | 50% |
IMG OID | 642488847 |
Product | short-chain dehydrogenase/reductase SDR |
Protein accession | YP_001739664 |
Protein GI | 170289426 |
COG category | [I] Lipid transport and metabolism [Q] Secondary metabolites biosynthesis, transport and catabolism [R] General function prediction only |
COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 26 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | TTGGAACTGG GCATCAGGGG TAAAAGCGCC CTCGTTCTTG CAGGAAGCAG GGGAATAGGA AGGGCAGTTG CAGATGCCCT GAGGGAAGAA GGTGTCAGGG TTGTGGTCTG TTCAAGAAAC GAGGAACTGT TGAAGAAAAC AGGACACGAG TATGTGGTCT GTGATCTGAA GAGAGAGCCA GACAGGTTGT TTGAGAGGAT AAAAGAGGTG GACATCCTCG TTCTGAACAT GGGAGGACCA AAACCGGGAT ACCTCGACGA TCTGACGGAT GAAGATTTCA AAGATGCCAT CGACGGTCTG TTCCTGAACA TGGTGAAGAT CGTGAGGAAC TATCTTCCCG ATATGAAGAG AAAGCGCTGG GGAAGAATCG TTGCCATCAC TTCTTTCTCC GTGGTCTCTC CTCTGGAGAA CCTCTACACT TCGAACTCTG CAAGAATGGC CCTCACAGGT TTTCTGAAGA CACTTTCCTT CGAAGTGGCC CCGTACAACA TCACCGTGAA CTGTGTGGCA CCCGGCTGGA CCGAAACGGA GAGAGTGAAA GAACTTCTCG ATGAGGACAA AAAAAGACAG GTGGAATCAC AGATTCCCAT GAAGAGGATG GCGAAACCTG AGGAGATAGC AAACGTGGTG GCCTTTCTGT GTTCTGAGAA GGCTTCCTAC ATCACGGGAC AGACCGTTGT TGTAGATGGA GGCCTTTCGA GATTTCCCCT CTGA
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Protein sequence | MELGIRGKSA LVLAGSRGIG RAVADALREE GVRVVVCSRN EELLKKTGHE YVVCDLKREP DRLFERIKEV DILVLNMGGP KPGYLDDLTD EDFKDAIDGL FLNMVKIVRN YLPDMKRKRW GRIVAITSFS VVSPLENLYT SNSARMALTG FLKTLSFEVA PYNITVNCVA PGWTETERVK ELLDEDKKRQ VESQIPMKRM AKPEEIANVV AFLCSEKASY ITGQTVVVDG GLSRFPL
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