| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewmr4_1929 |
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| Symbol | |
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| ID | 4252503 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. MR-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008321 |
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| Strand | + |
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| Start bp | 2299261 |
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| End bp | 2300058 |
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| Gene Length | 798 bp |
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| Protein Length | 265 aa |
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| Translation table | 11 |
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| GC content | 52% |
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| IMG OID | 638118540 |
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| Product | short chain dehydrogenase |
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| Protein accession | YP_734060 |
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| Protein GI | 113970267 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only |
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| COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.000156385 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 0 |
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| Fosmid unclonability p-value | 0.0000000000437203 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | unclonable |
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Sequence |
| Gene sequence | ATGCTGAATA CTACGATGTT TAATTATCAA GGTAAGAATG TTGTCGTTGT CGGTGGTACG
AGTGGAATTA ACCTCGCGAT TGCCAACGCC TTTGCGCTGG CTGGCGCGAA TGTGGCGGTG
GCGAGTCGCA GCCAAGACAA GATTGATGCC GCCGTGTTGC AGCTAAAGCA GTCAAATCCT
GATGGGATCC ACCTTGGGGT GAGTTTTGAT GTCAGGGATT TGGCTGCGGT CGAGCAGGGG
TTTGACACTA TCGCCTCCGA ATTTGGCTTT ATCGATGTGT TGGTAAGTGG CGCTGCAGGT
AACTTTCCGG CTACAGCGGC AAAACTCTCT GCTAATGGCT TTAAAGCCGT GATGGACATT
GATCTGCTGG GCAGTTTTCA AGTGCTAAAG ACGGCTTATC CTTTACTGCG TCGCCCCCAA
GGGAATATTA TTCAAATCTC GGCGCCGCAG GCATCGATAG CCATGCCAAT GCAAGCTCAT
GTGTGCGCTG CTAAAGCTGG TGTAGACATG CTCACTCGGA CATTGGCGAT AGAATGGGGC
TGTGAAGGGA TTCGAATTAA CTCGATTGTG CCTGGTCCTA TTGCGGGCAC AGAAGGCTTT
AACCGCTTAG CGCCGAGTGC AGCTCTGCAA CAAGGAGTGG CACAATCAGT ACCGTTAAAA
CGCAATGGTG AAGGGCAGGA CATTGCTAAT GCCGCGATGT TTTTAGGCTC TGAGTTGGCC
TCCTACATCA CAGGGGTTGT GCTTCCTGTC GATGGCGGAT GGTCGCTCGG TGGCGCCAGC
ATTGCGATGT CGGATTAA
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| Protein sequence | MLNTTMFNYQ GKNVVVVGGT SGINLAIANA FALAGANVAV ASRSQDKIDA AVLQLKQSNP
DGIHLGVSFD VRDLAAVEQG FDTIASEFGF IDVLVSGAAG NFPATAAKLS ANGFKAVMDI
DLLGSFQVLK TAYPLLRRPQ GNIIQISAPQ ASIAMPMQAH VCAAKAGVDM LTRTLAIEWG
CEGIRINSIV PGPIAGTEGF NRLAPSAALQ QGVAQSVPLK RNGEGQDIAN AAMFLGSELA
SYITGVVLPV DGGWSLGGAS IAMSD
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