| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swit_3068 |
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| Symbol | |
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| ID | 5197229 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sphingomonas wittichii RW1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009511 |
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| Strand | + |
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| Start bp | 3366119 |
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| End bp | 3366880 |
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| Gene Length | 762 bp |
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| Protein Length | 253 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 640582617 |
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| Product | short-chain dehydrogenase/reductase SDR |
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| Protein accession | YP_001263556 |
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| Protein GI | 148555974 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only |
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| COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 39 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 0.365942 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCGCATC TCAACGACAA GGCGGCGATC GTCACCGGTT CCGCATCGGG CATCGGGTTC
GATCTCGCCG CCGATCTCGC GCGGCGCGGC GCGAAGGTGA TGCTCTGCGA CGTCGCCGAT
CCGATGGCGG CCGTCGCCCG GCTCCGCGAC GAGGGGCTCG ACGCCGACGG CATGGTCGCC
GACGTCGCCG ATCCGTCCGC CTTCGCCGGG GTGGTGGCGG GTTGCGTCGA CCGCTTCGGA
CGGCTCGACA TCCTCGTCAA CAATGCCGGC CTGTTCACGA CGATCGGCCG CGCGCCGTTC
GAGGAACTCG ACGTCGACGA ATGGCGGCGC GTCCTCGACG TCAACGTCAC CGGTCCCTTC
CTGTGCAGCC GGGCAGCGCT GCCGCAGCTG CGCGCGGCGG GCGGGGGACG GATCATCAAC
ATCGGGTCCG CCACCGTCTT CTCGGCGCCG CCGAACATGC TGCACTATGT GGCGAGCAAG
GGCGCGCTGA CCGCAATGAC GCGGTCGATG GCGCGGGAGG TCGGCAAGGA CGGCATCACC
GTCAACCTGA TCGCGCCCGG CTTCACGATC AGCGCGGGCG TCCTCGAACA TCAGGCGGCG
ACGCTCGGCG AGCATGGCGC GCGCATGCGC GCTGCCCGGG CGATCGGACG CGACCAGATG
CCCCAGGACA TCTGCGGCGC GGTGTCCTTC CTGGCCGGCG ACGATGCCGG CTTCATCACC
GGCCAGACCC TGGTCGTCGA TGGCGGGATC GTGATGCGCT GA
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| Protein sequence | MAHLNDKAAI VTGSASGIGF DLAADLARRG AKVMLCDVAD PMAAVARLRD EGLDADGMVA
DVADPSAFAG VVAGCVDRFG RLDILVNNAG LFTTIGRAPF EELDVDEWRR VLDVNVTGPF
LCSRAALPQL RAAGGGRIIN IGSATVFSAP PNMLHYVASK GALTAMTRSM AREVGKDGIT
VNLIAPGFTI SAGVLEHQAA TLGEHGARMR AARAIGRDQM PQDICGAVSF LAGDDAGFIT
GQTLVVDGGI VMR
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