Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rleg_2261 |
Symbol | |
ID | 8013264 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhizobium leguminosarum bv. trifolii WSM1325 |
Kingdom | Bacteria |
Replicon accession | NC_012850 |
Strand | + |
Start bp | 2266319 |
End bp | 2267101 |
Gene Length | 783 bp |
Protein Length | 260 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 644824846 |
Product | short-chain dehydrogenase/reductase SDR |
Protein accession | YP_002976076 |
Protein GI | 241204980 |
COG category | [I] Lipid transport and metabolism [Q] Secondary metabolites biosynthesis, transport and catabolism [R] General function prediction only |
COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.00824711 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
| |
Fosmid Coverage information |
Num covering fosmid clones | 18 |
Fosmid unclonability p-value | 0.0431071 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGAAACGCT TTGAGCAGAA GACTGTCGTC ATTACCGGGG GTAGCCGCGG CATCGGAGCG GCGATCGCCA AACGCTTCGC GAAAGAAGGC GCCAATCTCG TCGTCTCGGC CAATGAGGAC CTGGTCCACG GCGTCGCCGA ACAGATCCGG GCCGAAGGCG GCAAGGCGAT CTCCTTCATC GGCGATGTCA CCGACAAGGC AAGCGTCACC GCCCTCTACG ATGCCGCCGA GAAGGAATTC GGCTCGGTCG ACGTTTCGAT CCAGAATGCT GGCGTCATCA CAATCGCCCG CGTCGAGGAC CTGACCGAAA ACGAGTGGGA CAAGGTCATG GCCGTCAACA CCAAGGGCGT CTTCCTCTGC GCCCAGGAGG CGATATCAAG GATGCGCAAG CACAAGCGCG GCGGCCGCAT CATCAACACC GCTTCCGGCC AGGCCCGCGA CGGCTTCATC TACACCCCGC ATTATGCCGC CTCGAAAATG GGCGTCGTCG GCATCACCCA GAGCCTGGCC AAGGAAGTCG CGACCGAGAA GATCACCGTC AACGCCTTCT GCCCCGGCAT CATCGAGACC GACATGTGGG CCTATAACGA CCAGGCCTGG GGCAAGCTGC TCGGCAACTA CGCCCCCGGC GAACTGATGA AGGAATGGGT CGAGGGCATC CCGATGAAAC GGGCCGGCTC TGGGGAAGAT GTCGCCGGCC TGGTGACCTT CCTCGCCAGC GATGACGCCG CCTATATCAC CGGCCAGACG ATCAATGTCG ACGGCGGCCT GATCATGTTC TGA
|
Protein sequence | MKRFEQKTVV ITGGSRGIGA AIAKRFAKEG ANLVVSANED LVHGVAEQIR AEGGKAISFI GDVTDKASVT ALYDAAEKEF GSVDVSIQNA GVITIARVED LTENEWDKVM AVNTKGVFLC AQEAISRMRK HKRGGRIINT ASGQARDGFI YTPHYAASKM GVVGITQSLA KEVATEKITV NAFCPGIIET DMWAYNDQAW GKLLGNYAPG ELMKEWVEGI PMKRAGSGED VAGLVTFLAS DDAAYITGQT INVDGGLIMF
|
| |