| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Franean1_4317 |
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| Symbol | |
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| ID | 5672672 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Frankia sp. EAN1pec |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009921 |
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| Strand | + |
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| Start bp | 5157646 |
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| End bp | 5158350 |
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| Gene Length | 705 bp |
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| Protein Length | 234 aa |
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| Translation table | 11 |
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| GC content | 72% |
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| IMG OID | 641243190 |
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| Product | short-chain dehydrogenase/reductase SDR |
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| Protein accession | YP_001508607 |
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| Protein GI | 158316099 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only |
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| COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.0991034 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 0.658106 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGAGGACGG CGGTGGTGAC CGGCGGTGGT TCGGGCATCG GCCTGGCCGT CGCGGACCGT
CTGCGGGCCG ATGGGTACAA CGTCGCCGTG CTCGACCTGA AGCCCCCGGA GTCCGACCCG
ACCGGCCCGA CGGACGTGAC CGACCGGGCC CAGATCGACG CGGCGCTGAC CGCCGTCCGG
GAGCGGTTCG GGCCGGTGAC CGTCCTGGTC AACGCGGCCG GGATCGACGG CTTCCGGCAG
TTCGCCAACA TCGACTTCGA GACCTGGAAG CGGGTCATCG ACGTCAACCT CAACGGCGTC
TACCACTGCA TCCAGGCGGT TCTACCCGAC ATGGTCGGCG CAGGCTGGGG GCGCATCGTC
AACATCTCGT CGTCCAGCGC GCACTCGGGC CAGCCGCTGA TGGCGCACTA CGTGGCGGCC
AAGTCCGCCG TCAACGGGCT GACCAAGGCC CTGGCGCTGG AGCTGGGCCC GGCCGGCATC
ACCGTCAACG CGGTGCCGCC CGGATTCGTC GACACCCCCA TGCTGCGCGG GGCCGAGGCG
CGCGGGCTGC TGGGCGGCAC GATCGAGGAC CACATCCAGC GCACGCCGGT GCGCCGGGTC
GGGCGGGCGG AGGACATCGC GGCGGCCTGC GCCTTCCTGA TCTCCGAGGA GGCCGGGTAC
ATCACCGGCC AGATCCTCGG CGTCAACGGC GGGCGCAACA CCTGA
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| Protein sequence | MRTAVVTGGG SGIGLAVADR LRADGYNVAV LDLKPPESDP TGPTDVTDRA QIDAALTAVR
ERFGPVTVLV NAAGIDGFRQ FANIDFETWK RVIDVNLNGV YHCIQAVLPD MVGAGWGRIV
NISSSSAHSG QPLMAHYVAA KSAVNGLTKA LALELGPAGI TVNAVPPGFV DTPMLRGAEA
RGLLGGTIED HIQRTPVRRV GRAEDIAAAC AFLISEEAGY ITGQILGVNG GRNT
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