| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Msil_3367 |
|---|
| Symbol | |
|---|
| ID | 7092093 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methylocella silvestris BL2 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011666 |
|---|
| Strand | - |
|---|
| Start bp | 3695288 |
|---|
| End bp | 3696022 |
|---|
| Gene Length | 735 bp |
|---|
| Protein Length | 244 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | 643466673 |
|---|
| Product | short-chain dehydrogenase/reductase SDR |
|---|
| Protein accession | YP_002363634 |
|---|
| Protein GI | 217979487 |
|---|
| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only |
|---|
| COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | n/a |
|---|
| Plasmid unclonability p-value | n/a |
|---|
| Plasmid hitchhiking | n/a |
|---|
| Plasmid clonability | n/a |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 45 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACCCGAT TGAATGGAAA GACCGCCGTC ATCACGGGCG GCGCCACCGG CATCGGCCTC
GCCGCAGCAA CGCGCTTCAT CGAGGAGGGC GCCTTTGTCT TCATCTTCGG CCGCCGGCAG
GAAGCGCTCG ACACGGCTGT GGCCGAGCTG GGGCCCAATG CCCGGGCGGT GAAGGGCTCG
GTCTCGAATG AGGCCGACCT CGACCGACTT TACGCGGCGG TGAAGGCCGA GCGCGGAACC
CTCGACATCG TCTTCGCCAA TGCCGGGGTG GGAAGCCCGC TCAAGCTCGG CGAGATCACC
GCCGAGCACA TCGACGAAAC CTTCGACGTC AATGTGAAGG GTACGATTTT CACCGTCCAG
AAGGCGTTGC CCCTCATGGG CATGGGCGGT TCGATCATCC TGACCGGATC GAGCGCCGGC
GCCACGGGCG CCCCGGGATT CACCGCTTAC AGCGCGAGCA AGGCGGCGGT GCGCAACCTC
GCGCGGACCT GGGCGGAGGA CCTCAAGGGC ACAGGCATCC GGGTCAATGT GCTGTCGCCC
GGGGCGACGG CGACCGAACT CGCGAAGGAA GCGCTGGGCG AGGAGGGCCA GAAGGCCTTC
GCCGTGATGA CTCCGCTGCA GCGCATGGCT GACCCATCGG AGATCGGGGC CGTGGCCGCC
TTCCTCGCAT CGTCGGACAG CAGCTTCATG ACCGCCAGCG AGGTCGCGGT CGACGGCGGC
CTGGCGCAAA TCTGA
|
|---|
| Protein sequence | MTRLNGKTAV ITGGATGIGL AAATRFIEEG AFVFIFGRRQ EALDTAVAEL GPNARAVKGS
VSNEADLDRL YAAVKAERGT LDIVFANAGV GSPLKLGEIT AEHIDETFDV NVKGTIFTVQ
KALPLMGMGG SIILTGSSAG ATGAPGFTAY SASKAAVRNL ARTWAEDLKG TGIRVNVLSP
GATATELAKE ALGEEGQKAF AVMTPLQRMA DPSEIGAVAA FLASSDSSFM TASEVAVDGG
LAQI
|
|---|
| |