| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpic12D_3069 |
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| Symbol | |
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| ID | 8020752 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ralstonia pickettii 12D |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012856 |
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| Strand | - |
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| Start bp | 3245037 |
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| End bp | 3245873 |
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| Gene Length | 837 bp |
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| Protein Length | 278 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 644831865 |
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| Product | short-chain dehydrogenase/reductase SDR |
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| Protein accession | YP_002983009 |
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| Protein GI | 241664649 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only |
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| COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 42 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTGGCGCG GCGTGCTCGT CCTCCTCCAT TTTCCTTTTT TGAATGCCAT GAACCTCCAC
CTTCAGAACA AGCTCGCTCT CGTGACCGGC TCGACCAAGG GCATCGGTCA TGCCATTGCT
GTAGCACTGG CCGCCGAAGG CGCCCGCGTG ATCGTCAACG GCCGCACCGA AGCGTCCGTG
GGCGACGCGA TTGCACGCCT GCGCACCGAG GTGCCCGACG CCCAGGTCGA GGGCTTTGCC
GGTGACCTGT CCAATCCGGC CCAGGTCGAT GCGCTGCTCG GCCGCTTTCC CAAGGTCGAC
ATCCTCATCA ACAACCTCGG CATCTTCGAG CCCAAGCCGT TCGAGGAAAT CGACGACGCC
GAGTGGCAGC ACTTCTTCAA CGTGAACGTG CTGAGCGGCG CGCGGCTGTC GCGCGCCTAC
CTGCCCGGTA TGCGTGCACA GAACTGGGGA CGCATCGTGT TCATCAGCAG CGAGAGCGGC
GTGCAGATTC CGGTGGAGAT GATCCACTAC GGTGTCACGA AGACCGCGCT GCTGGGCCTC
TCGCGTGGAT TGGCAGAGCT GACGGCGGGC ACGGCCATCA CGGTGAATGC CGTGCTGCCG
GGGCCGACGC GTTCCGAAGG CGTAGACGCG TTTGTCGAAA AGCTCTCGGG CGGGCAGAGC
TTCGAAGCGT TCGAGAAAAC CTTCTTCGAG ACGGCGCGGC CGACCTCGCT CATCAAGCGC
TTTGCCACCA CGCAGGAAGT CGCCAACCTG GTTGCCTACG TGGCCAGCCC GCTGTCGTCG
GCCACCACGG GCGCTGCGCT GCGTGTGGAC GGCGGCGTGG TGAAGTCGGC GTTCTAG
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| Protein sequence | MWRGVLVLLH FPFLNAMNLH LQNKLALVTG STKGIGHAIA VALAAEGARV IVNGRTEASV
GDAIARLRTE VPDAQVEGFA GDLSNPAQVD ALLGRFPKVD ILINNLGIFE PKPFEEIDDA
EWQHFFNVNV LSGARLSRAY LPGMRAQNWG RIVFISSESG VQIPVEMIHY GVTKTALLGL
SRGLAELTAG TAITVNAVLP GPTRSEGVDA FVEKLSGGQS FEAFEKTFFE TARPTSLIKR
FATTQEVANL VAYVASPLSS ATTGAALRVD GGVVKSAF
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