Gene Sros_4576 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSros_4576 
Symbol 
ID8667870 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStreptosporangium roseum DSM 43021 
KingdomBacteria 
Replicon accessionNC_013595 
Strand
Start bp5089939 
End bp5090685 
Gene Length747 bp 
Protein Length248 aa 
Translation table11 
GC content66% 
IMG OID 
Productshort-chain dehydrogenase/reductase SDR 
Protein accessionYP_003340181 
Protein GI271965985 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.716912 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value0.113643 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACACGGT TCACCGACAA GACCGCCCTG ATCACCGGCG GTACGAGCGG CATGGGACTG 
GCCACCGCAC GCCGCCTCAT CACCGAGGGC GCCCACGTGG TCGTCACCGG CCGCACCCGG
CAGCGCGTGG ACCAGACTGC GGCCATGCTC GGCCCGCGCG CCCTCGGCGT GGTGGCGGAC
ATAGCCGACC TCAAGGCTCT GGACGCCCTG ATGAACACGA TCAAGACGCG ATACGGCAGG
CTGAACGTCG TCTTCGCCAA CGCCGGAGTG GGCACCTTCG CCCCCTTCGC CGACATCACC
GAGACCGACT TCGATCACAC CGTCGACGTG AACTTCAAAG GCGTGTTTTT CACGATCCAG
AAGGCATTGC CGCTGATCGC CGAGGGCGGC TCCATCGTCA TCAACGCCTC CTGGACTCTG
CACCGCGGTA ACGGCATCCT CACGTTGTAC TCGGCCACCA AGGCGGCCGC GCACAATCTG
GCCCGCACCC TGGCAGCGGA TCTCGCGCCC CGGGGCATCC GCGTCAACTC GATCAGTCCG
GGATACATCG ACACACCGAT GTATCCCGTC GCAGCGCTGA GCGAGACGGA GACCGCGGTC
ATCACCGATC GCATCGCGGC GGGCCGGTTC GGCCAACCGG AGGAGATCGC CACAGCTGTG
GCGTTTCTCG CCTCCCCCGA GGCGTCCTAC ATCAATGGCC AGGACCTGGT GATCGACGGC
GGCCTCGTGA ACGCGATCCC TGCCTGA
 
Protein sequence
MTRFTDKTAL ITGGTSGMGL ATARRLITEG AHVVVTGRTR QRVDQTAAML GPRALGVVAD 
IADLKALDAL MNTIKTRYGR LNVVFANAGV GTFAPFADIT ETDFDHTVDV NFKGVFFTIQ
KALPLIAEGG SIVINASWTL HRGNGILTLY SATKAAAHNL ARTLAADLAP RGIRVNSISP
GYIDTPMYPV AALSETETAV ITDRIAAGRF GQPEEIATAV AFLASPEASY INGQDLVIDG
GLVNAIPA