| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpic_3415 |
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| Symbol | |
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| ID | 6288872 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ralstonia pickettii 12J |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010682 |
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| Strand | - |
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| Start bp | 3582086 |
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| End bp | 3582874 |
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| Gene Length | 789 bp |
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| Protein Length | 262 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 642627000 |
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| Product | short-chain dehydrogenase/reductase SDR |
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| Protein accession | YP_001900968 |
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| Protein GI | 187930481 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only |
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| COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 35 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAACCTCC ACCTTCAGAA CAAGCTCGCT CTCGTGACCG GCTCGACCAA GGGCATCGGT
CATGCCATTG CTGTAGCACT GGCCGCCGAA GGCGCCCGCG TGATCGTCAA CGGCCGTACC
CAAGCGTCCG TGGACGACGC GATTGCACGC CTGCGCACCG AAGTGCCCGA CGCCCAGGTC
GAGGGCTTTG CCGGTGACCT GTCCGATCCG GGCCAGGTCG ACGCGCTGCT CGGCCGCTTT
CCCAAGGTCG ACATCCTCAT CAACAACCTC GGTATCTTCG ACCCCAAGCC GTTCGAGGAA
ATCGACGACG CCGAGTGGCA GCACTTCTTC AACGTGAACG TGCTGAGCGG CGCGCGGCTG
TCGCGCGCCT ACCTGCCTGG TATGCGTGCA CAGAACTGGG GACGCATCGT GTTCATCAGC
AGCGAGAGTG GCGTGCAGAT TCCGGTGGAG ATGATCCACT ACGGTGTCAC GAAGACCGCG
CTGCTGGGCC TCTCGCGCGG ATTGGCCGAG TTGACCGCGG GCACGGCCAT CACGGTGAAT
GCCGTGCTGC CGGGGCCGAC GCGTTCCGAA GGCGTAGACG CGTTTGTCGA AAAGCTCTCG
GGCGGGCAGA GCTTCGAAGC GTTCGAGAAA ACCTTCTTCG AGACGGCGCG GCCGACCTCG
CTCATCAAGC GCTTTGCCAC CACGCAGGAA GTCGCCAACC TGGTTGCCTA CGTGGCCAGC
CCGCTGTCGT CGGCCACCAC GGGCGCTGCG CTGCGTGTGG ACGGCGGCGT GGTGAAGTCG
GCGTTCTAG
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| Protein sequence | MNLHLQNKLA LVTGSTKGIG HAIAVALAAE GARVIVNGRT QASVDDAIAR LRTEVPDAQV
EGFAGDLSDP GQVDALLGRF PKVDILINNL GIFDPKPFEE IDDAEWQHFF NVNVLSGARL
SRAYLPGMRA QNWGRIVFIS SESGVQIPVE MIHYGVTKTA LLGLSRGLAE LTAGTAITVN
AVLPGPTRSE GVDAFVEKLS GGQSFEAFEK TFFETARPTS LIKRFATTQE VANLVAYVAS
PLSSATTGAA LRVDGGVVKS AF
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