More than 300 homologs were found in PanDaTox collection
for query gene Hoch_6742 on replicon NC_013440
Organism: Haliangium ochraceum DSM 14365



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_013440  Hoch_6742  putative two component transcriptional regulator, winged helix family  100 
 
 
242 aa  467  1.0000000000000001e-131  Haliangium ochraceum DSM 14365  Bacteria  normal  normal 
 
 
-
 
NC_011891  A2cp1_4151  two component transcriptional regulator, winged helix family  36.07 
 
 
230 aa  91.3  1e-17  Anaeromyxobacter dehalogenans 2CP-1  Bacteria  normal  n/a   
 
 
-
 
NC_011145  AnaeK_4125  two component transcriptional regulator, winged helix family  35.52 
 
 
230 aa  89.4  4e-17  Anaeromyxobacter sp. K  Bacteria  normal  0.125271  n/a   
 
 
-
 
NC_007492  Pfl01_5606  two component transcriptional regulator  32.27 
 
 
229 aa  89  6e-17  Pseudomonas fluorescens Pf0-1  Bacteria  normal  normal 
 
 
-
 
NC_008576  Mmc1_1893  two component transcriptional regulator  33.69 
 
 
235 aa  89  6e-17  Magnetococcus sp. MC-1  Bacteria  normal  normal  0.203788 
 
 
-
 
NC_004578  PSPTO_5477  phosphate regulon transcriptional regulatory protein PhoB  31.82 
 
 
229 aa  89  7e-17  Pseudomonas syringae pv. tomato str. DC3000  Bacteria  normal  n/a   
 
 
-
 
NC_007760  Adeh_4009  two component transcriptional regulator  35.52 
 
 
230 aa  88.6  8e-17  Anaeromyxobacter dehalogenans 2CP-C  Bacteria  decreased coverage  0.00751412  n/a   
 
 
-
 
NC_007005  Psyr_5032  response regulator receiver:transcriptional regulatory protein, C-terminal  31.82 
 
 
229 aa  88.2  9e-17  Pseudomonas syringae pv. syringae B728a  Bacteria  normal  normal  0.330128 
 
 
-
 
NC_002947  PP_5320  winged helix family two component transcriptional regulator  31.82 
 
 
242 aa  88.2  1e-16  Pseudomonas putida KT2440  Bacteria  normal  normal  0.023746 
 
 
-
 
NC_007333  Tfu_1238  response regulator receiver  36.05 
 
 
218 aa  87.4  2e-16  Thermobifida fusca YX  Bacteria  normal  n/a   
 
 
-
 
NC_010501  PputW619_0154  two component transcriptional regulator  31.82 
 
 
229 aa  87  2e-16  Pseudomonas putida W619  Bacteria  normal  normal  0.596099 
 
 
-
 
NC_010322  PputGB1_5367  two component transcriptional regulator  31.82 
 
 
229 aa  87.4  2e-16  Pseudomonas putida GB-1  Bacteria  normal  normal  0.400776 
 
 
-
 
NC_009512  Pput_5228  two component transcriptional regulator  31.82 
 
 
229 aa  87.4  2e-16  Pseudomonas putida F1  Bacteria  normal  0.661336  normal  0.450139 
 
 
-
 
NC_011146  Gbem_1846  two component transcriptional regulator, winged helix family  31.15 
 
 
226 aa  86.7  3e-16  Geobacter bemidjiensis Bem  Bacteria  normal  n/a   
 
 
-
 
NC_011831  Cagg_3302  two component transcriptional regulator, winged helix family  34.22 
 
 
231 aa  87  3e-16  Chloroflexus aggregans DSM 9485  Bacteria  normal  hitchhiker  0.000343135 
 
 
-
 
NC_007963  Csal_3253  two component transcriptional regulator  32.88 
 
 
229 aa  86.3  4e-16  Chromohalobacter salexigens DSM 3043  Bacteria  normal  n/a   
 
 
-
 
NC_013165  Shel_18040  response regulator with CheY-like receiver domain and winged-helix DNA-binding domain  36.32 
 
 
232 aa  86.3  4e-16  Slackia heliotrinireducens DSM 20476  Bacteria  normal  normal 
 
 
-
 
NC_009439  Pmen_4408  two component transcriptional regulator  31.36 
 
 
229 aa  86.3  4e-16  Pseudomonas mendocina ymp  Bacteria  normal  normal  0.0897949 
 
 
-
 
NC_007517  Gmet_2693  two component transcriptional regulator  33.33 
 
 
226 aa  85.9  6e-16  Geobacter metallireducens GS-15  Bacteria  normal  normal  0.575064 
 
 
-
 
NC_012918  GM21_2513  two component transcriptional regulator, winged helix family  34.43 
 
 
225 aa  85.5  6e-16  Geobacter sp. M21  Bacteria  n/a    normal 
 
 
-
 
NC_009012  Cthe_1408  two component transcriptional regulator  30.93 
 
 
232 aa  85.9  6e-16  Clostridium thermocellum ATCC 27405  Bacteria  normal  n/a   
 
 
-
 
NC_012560  Avin_48520  phosphate regulon response regulator; PhoB  31.82 
 
 
229 aa  85.5  7e-16  Azotobacter vinelandii DJ  Bacteria  normal  0.0667889  n/a   
 
 
-
 
NC_008576  Mmc1_1491  two component transcriptional regulator  32.42 
 
 
236 aa  85.1  8e-16  Magnetococcus sp. MC-1  Bacteria  normal  decreased coverage  0.00391258 
 
 
-
 
NC_002947  PP_4225  winged helix family two component transcriptional regulator  41.91 
 
 
227 aa  84.3  0.000000000000001  Pseudomonas putida KT2440  Bacteria  normal  normal 
 
 
-
 
NC_010803  Clim_0772  two component transcriptional regulator, winged helix family  32.96 
 
 
233 aa  84.7  0.000000000000001  Chlorobium limicola DSM 245  Bacteria  normal  n/a   
 
 
-
 
NC_009972  Haur_0905  two component transcriptional regulator  38.89 
 
 
238 aa  84.7  0.000000000000001  Herpetosiphon aurantiacus ATCC 23779  Bacteria  normal  n/a   
 
 
-
 
NC_009656  PSPA7_6138  two-component response regulator PhoB  30.91 
 
 
229 aa  83.6  0.000000000000002  Pseudomonas aeruginosa PA7  Bacteria  normal  n/a   
 
 
-
 
NC_007760  Adeh_2914  two component transcriptional regulator  36.61 
 
 
245 aa  83.6  0.000000000000002  Anaeromyxobacter dehalogenans 2CP-C  Bacteria  normal  0.634998  n/a   
 
 
-
 
NC_010322  PputGB1_3792  two component transcriptional regulator  41.91 
 
 
227 aa  84  0.000000000000002  Pseudomonas putida GB-1  Bacteria  normal  0.358087  normal  0.612342 
 
 
-
 
NC_008463  PA14_70750  two-component response regulator PhoB  30.91 
 
 
229 aa  83.6  0.000000000000002  Pseudomonas aeruginosa UCBPP-PA14  Bacteria  normal  normal 
 
 
-
 
NC_009512  Pput_1638  two component transcriptional regulator  41.91 
 
 
227 aa  84  0.000000000000002  Pseudomonas putida F1  Bacteria  normal  normal 
 
 
-
 
NC_008789  Hhal_0098  two component transcriptional regulator  37.13 
 
 
229 aa  84.3  0.000000000000002  Halorhodospira halophila SL1  Bacteria  normal  0.761303  n/a   
 
 
-
 
NC_011071  Smal_0824  two component transcriptional regulator, winged helix family  32.86 
 
 
229 aa  83.2  0.000000000000003  Stenotrophomonas maltophilia R551-3  Bacteria  normal  normal 
 
 
-
 
NC_011126  HY04AAS1_1268  two component transcriptional regulator, winged helix family  31.95 
 
 
229 aa  83.2  0.000000000000003  Hydrogenobaculum sp. Y04AAS1  Bacteria  normal  n/a   
 
 
-
 
NC_009675  Anae109_0415  two component transcriptional regulator  34.97 
 
 
231 aa  83.6  0.000000000000003  Anaeromyxobacter sp. Fw109-5  Bacteria  normal  normal  0.777838 
 
 
-
 
NC_013501  Rmar_0993  two component transcriptional regulator, winged helix family  32.11 
 
 
237 aa  82.8  0.000000000000004  Rhodothermus marinus DSM 4252  Bacteria  normal  n/a   
 
 
-
 
NC_010501  PputW619_3550  two component transcriptional regulator  41.18 
 
 
227 aa  82.8  0.000000000000004  Pseudomonas putida W619  Bacteria  normal  0.0188344  normal 
 
 
-
 
NC_008254  Meso_3116  two component transcriptional regulator  33.88 
 
 
229 aa  82.8  0.000000000000004  Chelativorans sp. BNC1  Bacteria  normal  0.202822  n/a   
 
 
-
 
NC_010814  Glov_0588  two component transcriptional regulator, winged helix family  31.52 
 
 
226 aa  83.2  0.000000000000004  Geobacter lovleyi SZ  Bacteria  normal  0.944339  n/a   
 
 
-
 
NC_010001  Cphy_2827  two component transcriptional regulator  29.67 
 
 
230 aa  82.4  0.000000000000005  Clostridium phytofermentans ISDg  Bacteria  normal  n/a   
 
 
-
 
NC_010524  Lcho_1659  two component transcriptional regulator  38.19 
 
 
245 aa  82.8  0.000000000000005  Leptothrix cholodnii SP-6  Bacteria  n/a    normal 
 
 
-
 
NC_011145  AnaeK_3000  two component transcriptional regulator, winged helix family  36.61 
 
 
234 aa  82.4  0.000000000000005  Anaeromyxobacter sp. K  Bacteria  normal  n/a   
 
 
-
 
NC_011891  A2cp1_3106  two component transcriptional regulator, winged helix family  36.61 
 
 
234 aa  82.4  0.000000000000006  Anaeromyxobacter dehalogenans 2CP-1  Bacteria  normal  n/a   
 
 
-
 
NC_010002  Daci_4913  two component transcriptional regulator  37.89 
 
 
231 aa  82.4  0.000000000000006  Delftia acidovorans SPH-1  Bacteria  normal  normal  0.121364 
 
 
-
 
NC_013595  Sros_0304  response regulator receiver protein  35.15 
 
 
218 aa  82  0.000000000000007  Streptosporangium roseum DSM 43021  Bacteria  normal  0.818258  normal 
 
 
-
 
NC_009767  Rcas_2782  two component transcriptional regulator  32.28 
 
 
231 aa  82  0.000000000000007  Roseiflexus castenholzii DSM 13941  Bacteria  normal  0.92379  normal 
 
 
-
 
NC_007520  Tcr_0541  two component transcriptional regulator  31.22 
 
 
230 aa  82  0.000000000000007  Thiomicrospira crunogena XCL-2  Bacteria  normal  n/a   
 
 
-
 
NC_009486  Tpet_1512  two component transcriptional regulator  36.64 
 
 
226 aa  81.3  0.00000000000001  Thermotoga petrophila RKU-1  Bacteria  normal  n/a   
 
 
-
 
NC_013440  Hoch_0268  two component transcriptional regulator, winged helix family  34.42 
 
 
227 aa  81.6  0.00000000000001  Haliangium ochraceum DSM 14365  Bacteria  normal  normal  0.509377 
 
 
-
 
NC_007604  Synpcc7942_2466  two component transcriptional regulator  39.58 
 
 
235 aa  81.6  0.00000000000001  Synechococcus elongatus PCC 7942  Bacteria  normal  0.28267  hitchhiker  0.0000000000126243 
 
 
-
 
NC_010483  TRQ2_1561  two component transcriptional regulator  36.64 
 
 
226 aa  81.3  0.00000000000001  Thermotoga sp. RQ2  Bacteria  normal  n/a   
 
 
-
 
NC_008699  Noca_2939  response regulator receiver  40.15 
 
 
232 aa  81.6  0.00000000000001  Nocardioides sp. JS614  Bacteria  normal  n/a   
 
 
-
 
NC_008782  Ajs_2367  two component transcriptional regulator  36.02 
 
 
235 aa  81.3  0.00000000000001  Acidovorax sp. JS42  Bacteria  normal  normal 
 
 
-
 
NC_012793  GWCH70_0170  two component transcriptional regulator, winged helix family  30.32 
 
 
232 aa  80.5  0.00000000000002  Geobacillus sp. WCH70  Bacteria  normal  n/a   
 
 
-
 
NC_010524  Lcho_3011  two component transcriptional regulator  39.87 
 
 
221 aa  80.5  0.00000000000002  Leptothrix cholodnii SP-6  Bacteria  n/a    normal 
 
 
-
 
NC_009667  Oant_0766  two component transcriptional regulator  33.52 
 
 
228 aa  80.9  0.00000000000002  Ochrobactrum anthropi ATCC 49188  Bacteria  normal  0.0291358  n/a   
 
 
-
 
NC_010581  Bind_3302  two component transcriptional regulator  29.17 
 
 
230 aa  80.9  0.00000000000002  Beijerinckia indica subsp. indica ATCC 9039  Bacteria  normal  0.288231  normal  0.346827 
 
 
-
 
NC_009654  Mmwyl1_4400  two component transcriptional regulator  31.82 
 
 
236 aa  80.9  0.00000000000002  Marinomonas sp. MWYL1  Bacteria  normal  0.998417  normal 
 
 
-
 
NC_011071  Smal_1792  two component transcriptional regulator, winged helix family  38.89 
 
 
249 aa  79.7  0.00000000000003  Stenotrophomonas maltophilia R551-3  Bacteria  normal  0.783202  normal  0.482984 
 
 
-
 
NC_011883  Ddes_0567  two component transcriptional regulator, winged helix family  33.03 
 
 
225 aa  80.1  0.00000000000003  Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774  Bacteria  normal  0.463355  n/a   
 
 
-
 
NC_009012  Cthe_1600  two component transcriptional regulator  30.48 
 
 
224 aa  80.1  0.00000000000003  Clostridium thermocellum ATCC 27405  Bacteria  hitchhiker  0.000237714  n/a   
 
 
-
 
NC_012791  Vapar_2316  two component transcriptional regulator PhoB, winged helix family  35.62 
 
 
230 aa  79.7  0.00000000000004  Variovorax paradoxus S110  Bacteria  normal  n/a   
 
 
-
 
NC_013204  Elen_2563  two component transcriptional regulator, winged helix family  35.26 
 
 
230 aa  79.7  0.00000000000004  Eggerthella lenta DSM 2243  Bacteria  normal  normal 
 
 
-
 
NC_008752  Aave_1493  two component transcriptional regulator  40.88 
 
 
232 aa  79.7  0.00000000000004  Acidovorax citrulli AAC00-1  Bacteria  normal  0.12584  normal  0.340507 
 
 
-
 
NC_014212  Mesil_2802  two component transcriptional regulator, winged helix family  39.47 
 
 
219 aa  79.3  0.00000000000005  Meiothermus silvanus DSM 9946  Bacteria  normal  normal  0.204502 
 
 
-
 
NC_013595  Sros_4916  response regulator receiver protein  38.69 
 
 
233 aa  79.3  0.00000000000005  Streptosporangium roseum DSM 43021  Bacteria  normal  normal 
 
 
-
 
NC_011899  Hore_13280  two component transcriptional regulator, winged helix family  29.53 
 
 
227 aa  79.3  0.00000000000005  Halothermothrix orenii H 168  Bacteria  hitchhiker  0.0000000536961  n/a   
 
 
-
 
NC_011661  Dtur_0154  two component transcriptional regulator, winged helix family  34.67 
 
 
220 aa  79.3  0.00000000000005  Dictyoglomus turgidum DSM 6724  Bacteria  normal  0.443854  n/a   
 
 
-
 
NC_008752  Aave_2631  two component transcriptional regulator  35.4 
 
 
235 aa  79.3  0.00000000000005  Acidovorax citrulli AAC00-1  Bacteria  normal  0.552533  normal  0.0653315 
 
 
-
 
NC_010524  Lcho_0277  two component transcriptional regulator  42.03 
 
 
235 aa  79.3  0.00000000000005  Leptothrix cholodnii SP-6  Bacteria  n/a    normal  0.344057 
 
 
-
 
NC_002977  MCA3105  DNA-binding response regulator PhoB  34.97 
 
 
232 aa  79  0.00000000000006  Methylococcus capsulatus str. Bath  Bacteria  normal  n/a   
 
 
-
 
NC_010524  Lcho_1373  two component transcriptional regulator  41.73 
 
 
265 aa  79  0.00000000000006  Leptothrix cholodnii SP-6  Bacteria  n/a    normal 
 
 
-
 
NC_009718  Fnod_1433  two component transcriptional regulator  33.11 
 
 
229 aa  79  0.00000000000006  Fervidobacterium nodosum Rt17-B1  Bacteria  normal  n/a   
 
 
-
 
NC_007492  Pfl01_3935  two component transcriptional regulator  38.13 
 
 
226 aa  79  0.00000000000006  Pseudomonas fluorescens Pf0-1  Bacteria  normal  0.646675  normal 
 
 
-
 
NC_009523  RoseRS_0805  two component transcriptional regulator  38.81 
 
 
229 aa  79  0.00000000000006  Roseiflexus sp. RS-1  Bacteria  normal  normal 
 
 
-
 
NC_011992  Dtpsy_1491  two component transcriptional regulator PhoB, winged helix family  35.4 
 
 
235 aa  79  0.00000000000006  Acidovorax ebreus TPSY  Bacteria  normal  n/a   
 
 
-
 
NC_006348  BMA0308  DNA-binding response regulator  39.53 
 
 
220 aa  79  0.00000000000007  Burkholderia mallei ATCC 23344  Bacteria  normal  n/a   
 
 
-
 
NC_007514  Cag_0435  two component transcriptional regulator  33.83 
 
 
253 aa  79  0.00000000000007  Chlorobium chlorochromatii CaD3  Bacteria  normal  0.583358  n/a   
 
 
-
 
NC_007948  Bpro_2257  two component transcriptional regulator  37.24 
 
 
243 aa  79  0.00000000000007  Polaromonas sp. JS666  Bacteria  normal  0.512842  normal  0.410356 
 
 
-
 
NC_008836  BMA10229_A2437  DNA-binding response regulator  39.53 
 
 
220 aa  79  0.00000000000007  Burkholderia mallei NCTC 10229  Bacteria  normal  n/a   
 
 
-
 
NC_009074  BURPS668_0845  DNA-binding response regulator  39.53 
 
 
220 aa  79  0.00000000000007  Burkholderia pseudomallei 668  Bacteria  normal  n/a   
 
 
-
 
NC_009076  BURPS1106A_0850  DNA-binding response regulator  39.53 
 
 
220 aa  79  0.00000000000007  Burkholderia pseudomallei 1106a  Bacteria  normal  n/a   
 
 
-
 
NC_009080  BMA10247_0051  DNA-binding response regulator  39.53 
 
 
220 aa  79  0.00000000000007  Burkholderia mallei NCTC 10247  Bacteria  normal  n/a   
 
 
-
 
NC_007951  Bxe_A0699  two component transcriptional regulator  39.53 
 
 
220 aa  78.6  0.00000000000008  Burkholderia xenovorans LB400  Bacteria  normal  normal 
 
 
-
 
NC_013173  Dbac_2095  two component transcriptional regulator, winged helix family  33.16 
 
 
229 aa  78.6  0.00000000000008  Desulfomicrobium baculatum DSM 4028  Bacteria  normal  n/a   
 
 
-
 
NC_010338  Caul_4546  two component transcriptional regulator  33.03 
 
 
230 aa  78.6  0.00000000000008  Caulobacter sp. K31  Bacteria  normal  normal  0.281853 
 
 
-
 
NC_009953  Sare_1693  two component transcriptional regulator  34.55 
 
 
229 aa  78.6  0.00000000000008  Salinispora arenicola CNS-205  Bacteria  normal  decreased coverage  0.000234642 
 
 
-
 
NC_008148  Rxyl_3017  two component transcriptional regulator  37.84 
 
 
225 aa  78.6  0.00000000000009  Rubrobacter xylanophilus DSM 9941  Bacteria  normal  n/a   
 
 
-
 
NC_010730  SYO3AOP1_0329  two component transcriptional regulator, winged helix family  31.76 
 
 
231 aa  78.6  0.00000000000009  Sulfurihydrogenibium sp. YO3AOP1  Bacteria  normal  n/a   
 
 
-
 
NC_008781  Pnap_2201  two component transcriptional regulator  37.41 
 
 
242 aa  78.6  0.00000000000009  Polaromonas naphthalenivorans CJ2  Bacteria  normal  0.153982  normal 
 
 
-
 
NC_002939  GSU1102  DNA-binding response regulator  32.97 
 
 
225 aa  77.8  0.0000000000001  Geobacter sulfurreducens PCA  Bacteria  normal  n/a   
 
 
-
 
NC_009767  Rcas_1176  two component transcriptional regulator  38.06 
 
 
229 aa  78.2  0.0000000000001  Roseiflexus castenholzii DSM 13941  Bacteria  normal  normal  0.149936 
 
 
-
 
NC_010681  Bphyt_3267  two component transcriptional regulator, winged helix family  39.53 
 
 
220 aa  78.2  0.0000000000001  Burkholderia phytofirmans PsJN  Bacteria  normal  0.387524  normal 
 
 
-
 
NC_007498  Pcar_0653  two-component response regulator PhoB  32.09 
 
 
230 aa  77.8  0.0000000000001  Pelobacter carbinolicus DSM 2380  Bacteria  normal  0.131558  n/a   
 
 
-
 
NC_007644  Moth_0070  two component transcriptional regulator  36.3 
 
 
229 aa  78.2  0.0000000000001  Moorella thermoacetica ATCC 39073  Bacteria  normal  normal  0.834843 
 
 
-
 
NC_013161  Cyan8802_2736  two component transcriptional regulator, winged helix family  35.47 
 
 
257 aa  78.2  0.0000000000001  Cyanothece sp. PCC 8802  Bacteria  hitchhiker  0.00867541  hitchhiker  0.0000000494299 
 
 
-
 
NC_011726  PCC8801_3375  two component transcriptional regulator, winged helix family  35.47 
 
 
257 aa  78.2  0.0000000000001  Cyanothece sp. PCC 8801  Bacteria  n/a    n/a   
 
 
-
 
NC_008148  Rxyl_0589  two component transcriptional regulator  37.06 
 
 
229 aa  77.8  0.0000000000001  Rubrobacter xylanophilus DSM 9941  Bacteria  normal  0.588929  n/a   
 
 
-
 
NC_008639  Cpha266_0880  two component transcriptional regulator  32.42 
 
 
236 aa  78.2  0.0000000000001  Chlorobium phaeobacteroides DSM 266  Bacteria  normal  n/a   
 
 
-
 
NC_008785  BMASAVP1_A0603  DNA-binding response regulator  38.81 
 
 
283 aa  77.8  0.0000000000001  Burkholderia mallei SAVP1  Bacteria  normal  n/a   
 
 
-
 
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