| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lcho_0277 |
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| Symbol | |
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| ID | 6163970 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Leptothrix cholodnii SP-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010524 |
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| Strand | - |
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| Start bp | 291635 |
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| End bp | 292342 |
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| Gene Length | 708 bp |
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| Protein Length | 235 aa |
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| Translation table | 11 |
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| GC content | 73% |
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| IMG OID | 641663021 |
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| Product | two component transcriptional regulator |
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| Protein accession | YP_001789317 |
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| Protein GI | 171056968 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG0745] Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 32 |
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| Fosmid unclonability p-value | 0.344057 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCGCCTCC TGCTCGTCGA AGACGATCCG ATGATCGGCA GCAGCCTGCG CGCCGCGCTG
CGCCTCGAAG GCATGGCGGT CGACTGGGTG CGCGACGTCG CCGCCGCGCA GGCCACGCTG
GCGAGTGAAC GTTTCGACCT GGTGCTGCTC GATCTCGGCC TGCCACCCGG TCGCGCCGCC
TCCAACCTGA CCGAACCGGG AACCGACGGC CTCAGCCTGC TGCGCAGCCT GCGTTCGCGC
GAAGACAGCA CGCCGGTGAT CGTGCTGACC GCGCGCGACG GCCCGGGCGA CCGCGTGCGC
GGCCTCGACG CCGGCGCCGA CGACTACCTC GTCAAGCCCT TCGAGCTCGA TGAACTCGCC
GCCCGCATCC GCGCCGTGAT GCGCCGCCAC AGCGGCCGCG CGCAGAGCGT GCTCAGCCAC
CGCGGCGTCA CGCTCGACCC GGCCACCCGC CAGGTCACGC GCGACGGCCA GCCGGTGCTG
CTGTCGGCGC GCGAGATCGC CGTGCTCGAA GCGCTGATGA CGCGGCCGGG CGCGATGCTC
ACCCGCGCCC AGCTCGAAGA CCGGCTCTAC GGCTGGGGCG AGGAGATCGA GAGCAACGCG
GTCTCGGTCT ACATCTACCA GCTGCGCCGC AAGCTCGGGC CGGGGTTCAT CCGCACGATG
CGCGGGCTGG GCTACAGCCT GGCCGACGAC GGCGGCGCCA GCCCATGA
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| Protein sequence | MRLLLVEDDP MIGSSLRAAL RLEGMAVDWV RDVAAAQATL ASERFDLVLL DLGLPPGRAA
SNLTEPGTDG LSLLRSLRSR EDSTPVIVLT ARDGPGDRVR GLDAGADDYL VKPFELDELA
ARIRAVMRRH SGRAQSVLSH RGVTLDPATR QVTRDGQPVL LSAREIAVLE ALMTRPGAML
TRAQLEDRLY GWGEEIESNA VSVYIYQLRR KLGPGFIRTM RGLGYSLADD GGASP
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