Gene Smal_1792 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSmal_1792 
Symbol 
ID6475745 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStenotrophomonas maltophilia R551-3 
KingdomBacteria 
Replicon accessionNC_011071 
Strand
Start bp2013283 
End bp2014032 
Gene Length750 bp 
Protein Length249 aa 
Translation table11 
GC content68% 
IMG OID642730974 
Producttwo component transcriptional regulator, winged helix family 
Protein accessionYP_002028179 
Protein GI194365569 
COG category[K] Transcription
[T] Signal transduction mechanisms 
COG ID[COG0745] Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value0.783202 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones27 
Fosmid unclonability p-value0.482984 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAGGCAA GCACCTTAAG GCCCCGCCCC TGCATGCAAG CCTCCCCTGC CCTCGCCGCC 
CTCGTCCTGA TCGTCGAGGA TGAGGCCGAG ATCGCCGACA TTCTCACCGC CTACCTGGAA
CGCGAAGGAT TGCGCACGCT CCGTGCCGCC GACGGCCACA GTGCGCTGGA CCTGCATCGC
AGCGCCCGCC CCGACCTGGT CCTGCTCGAT GTGCAGCTGC CGCGCCTGGA TGGCTGGAGC
GTGCTGACAC AGCTGCGCCA GCGCGGCGAG ACGCCGGTGA TCATGCTGAC CGCACTGGAC
CAGGACCTGG ACAAGCTGAC CGCGCTGCGC ATGGGCGCCG ACGACTATGT GGTCAAGCCG
TTCAATCCCG CTGAAGTGGC GGCACGCGTG CGTGCCGTGC TGCGGCGTAC GCTGCGCACC
TCGCGCGTTG ACGCGCCCAC CGCACTGCGC GTGGGCCCGC TGCTGATCGA TTCGGCCACC
CATGCCGTGC ACGTCGAGGG CGAAGGCTAC AGCCACGAAG TGCTGCTCAC GCTCACCGAG
TTCAAGCTGC TGCACTGCAT GGCGCTGGCG CCGACCCGCA TCTTCAGCCG CAGCGAATTG
ATGCACGAAT GCCTGCCGGA AAGCGAGGCG CTGGAGCGCA CGGTCGACAG CCATGTCAGC
AAGCTGCGCC GCAAGCTGGA TGAAGTGGGC ATGGTCAATG TGCCGGCCAG CGTGCGTGGC
GTCGGCTACC GGTTGATGGC CGACCGCTGA
 
Protein sequence
MEASTLRPRP CMQASPALAA LVLIVEDEAE IADILTAYLE REGLRTLRAA DGHSALDLHR 
SARPDLVLLD VQLPRLDGWS VLTQLRQRGE TPVIMLTALD QDLDKLTALR MGADDYVVKP
FNPAEVAARV RAVLRRTLRT SRVDAPTALR VGPLLIDSAT HAVHVEGEGY SHEVLLTLTE
FKLLHCMALA PTRIFSRSEL MHECLPESEA LERTVDSHVS KLRRKLDEVG MVNVPASVRG
VGYRLMADR