Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PputW619_3550 |
Symbol | |
ID | 6112508 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida W619 |
Kingdom | Bacteria |
Replicon accession | NC_010501 |
Strand | - |
Start bp | 3941530 |
End bp | 3942213 |
Gene Length | 684 bp |
Protein Length | 227 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 641623337 |
Product | two component transcriptional regulator |
Protein accession | YP_001750402 |
Protein GI | 170722714 |
COG category | [K] Transcription [T] Signal transduction mechanisms |
COG ID | [COG0745] Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.0188344 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 43 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGCACGTTC TGCTCTGCGA GGACGACGAC CTGATCGCCA GCGGCATCTG CGCCGGCCTC ACCGCCCAAG GCCTGACCGT CGACCGCGTA GCCAACGCCG GTGCCGCCCG GGCCATGCTC CAGGCGGCGC AGTTCGATGT GATGATCCTC GACCTTGGCC TGCCCGATGA AGACGGCCTC AAGCTGTTGC GCCGCTTGCG TCAGCAGGGT ATCGATCTGC CGGTGCTGGT GCTCACCGCG CGCGATGCGG TCACCGACCG GGTCGACGGC CTGCAGGCCG GTGCCGACGA CTACCTGCTC AAGCCCTTCG ACCTGCGCGA GCTGGCCGCG CGTCTGCACA CCTTGCTGCG CCGGGTTGCC GGGCGGGCGG TGAACGTGAT CGAGCATGGC CCGCTGCGCT ACGACCCCAG TAGCTGCGAA GCGACCCTGG CCGGTCAGCC GGTCGACCTG TCGCGGCGTG AGCAGGCCTT GCTCCAGGCG CTGCTGCAGA ACCCGGGCCG GGTGCTGTCC AGTGAACAGC TCAAGGACTG CGTGTACGGC TTCAGCGACG AAGTCGAAAG CAACGCCCTC AACGTGCATA TCCATCACTT GCGCCGCAAG CTTGGCAACA GCATCGTCGA GACCGTGCGC GGCCTGGGCT ACCGCCTTGG CCCGGCGCAG GCGCCAGAGG AAGCCGCATC ATGA
|
Protein sequence | MHVLLCEDDD LIASGICAGL TAQGLTVDRV ANAGAARAML QAAQFDVMIL DLGLPDEDGL KLLRRLRQQG IDLPVLVLTA RDAVTDRVDG LQAGADDYLL KPFDLRELAA RLHTLLRRVA GRAVNVIEHG PLRYDPSSCE ATLAGQPVDL SRREQALLQA LLQNPGRVLS SEQLKDCVYG FSDEVESNAL NVHIHHLRRK LGNSIVETVR GLGYRLGPAQ APEEAAS
|
| |