| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Fnod_1433 |
|---|
| Symbol | |
|---|
| ID | 5453096 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Fervidobacterium nodosum Rt17-B1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009718 |
|---|
| Strand | + |
|---|
| Start bp | 1552185 |
|---|
| End bp | 1552874 |
|---|
| Gene Length | 690 bp |
|---|
| Protein Length | 229 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 35% |
|---|
| IMG OID | 640875206 |
|---|
| Product | two component transcriptional regulator |
|---|
| Protein accession | YP_001410934 |
|---|
| Protein GI | 154250109 |
|---|
| COG category | [K] Transcription
[T] Signal transduction mechanisms |
|---|
| COG ID | [COG0745] Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 26 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAGAGTTC TCATCGTTGA AGATGAGCGT ATTATCGCAG AAAATCTTCA AAAGTTGCTC
AAATCAGATG GTTTTGAATC GGATGTCGCT AATGGGATAA ACGATATGTA TAGGAAACTT
GAGAAAAATA CTTATGAAGT TATATTGCTC GATTTGATGT TACCTGATGG AAATGCTATA
AACGAGATTC AAACGCTCAA AAATGAGTTT CCTGATATAG GTATTATCGT AATTTCAGCA
AAGAGTACGG ATATTGATAA GATACTTGGT ATAGAACTTG GAGCTGACGA TTACGTTGGA
AAACCTTTCA ATCCAAGAGA AGTTGTTGCT AGAGTTAAAG CGTATTTACG CCGTACAAAA
GGCATAAAAG AGGTTATACG TTATGGTAAA TTGGAGATAT ATCCATCTGA TTACGTTGTC
CTTTACGATG GGCAAAAGAT AGATTTAACC GCAAAAGAAT TTGAAATATT GAAATTGTTG
GCTCAAAGAC CAGACAGGGT TTATTCTCGT GAAGAAATAT TAGAGACCAT CTGGACTGAT
GAGTATGATG TTTTTGATAG AGTTGTCGAT GTACATATAA ATAGTCTTAG AAAGAAACTT
GGAAAAGATT GGATAATAAC CGTTAGGGGG GTTGGGTACA AATTTTCAAA AAAGGGAGAT
GCCCAATCAA GTGAAAATGA GCGATTATGA
|
|---|
| Protein sequence | MRVLIVEDER IIAENLQKLL KSDGFESDVA NGINDMYRKL EKNTYEVILL DLMLPDGNAI
NEIQTLKNEF PDIGIIVISA KSTDIDKILG IELGADDYVG KPFNPREVVA RVKAYLRRTK
GIKEVIRYGK LEIYPSDYVV LYDGQKIDLT AKEFEILKLL AQRPDRVYSR EEILETIWTD
EYDVFDRVVD VHINSLRKKL GKDWIITVRG VGYKFSKKGD AQSSENERL
|
|---|
| |