267 homologs were found in PanDaTox collection
for query gene Gura_3380 on replicon NC_009483
Organism: Geobacter uraniireducens Rf4



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_009483  Gura_3380    100 
 
 
390 bp  773    Geobacter uraniireducens Rf4  Bacteria  normal  n/a   
 
 
-
 
NC_009483  Gura_2269    100 
 
 
651 bp  109  6e-22  Geobacter uraniireducens Rf4  Bacteria  normal  n/a   
 
 
-
 
NC_008609  Ppro_1221  methyl-accepting chemotaxis sensory transducer  83.56 
 
 
1635 bp  99.6  6e-19  Pelobacter propionicus DSM 2379  Bacteria  unclonable  0.000000143655  n/a   
 
 
-
 
NC_012918  GM21_2326  methyl-accepting chemotaxis sensory transducer  86.67 
 
 
1644 bp  97.6  2e-18  Geobacter sp. M21  Bacteria  n/a    normal 
 
 
-
 
NC_008609  Ppro_0142  methyl-accepting chemotaxis sensory transducer  79.18 
 
 
1623 bp  97.6  2e-18  Pelobacter propionicus DSM 2379  Bacteria  normal  0.0808523  n/a   
 
 
-
 
NC_008609  Ppro_3147  methyl-accepting chemotaxis sensory transducer  88.04 
 
 
1623 bp  95.6  9e-18  Pelobacter propionicus DSM 2379  Bacteria  normal  0.0302394  n/a   
 
 
-
 
NC_011146  Gbem_1884  methyl-accepting chemotaxis sensory transducer  87.37 
 
 
1644 bp  93.7  3e-17  Geobacter bemidjiensis Bem  Bacteria  normal  0.114501  n/a   
 
 
-
 
NC_002939  GSU1029  methyl-accepting chemotaxis protein  85.71 
 
 
1650 bp  89.7  5e-16  Geobacter sulfurreducens PCA  Bacteria  normal  0.392996  n/a   
 
 
-
 
NC_010814  Glov_3312  methyl-accepting chemotaxis sensory transducer  83.46 
 
 
1602 bp  89.7  5e-16  Geobacter lovleyi SZ  Bacteria  normal  n/a   
 
 
-
 
NC_002939  GSU0935  methyl-accepting chemotaxis protein, putative  80.87 
 
 
1587 bp  85.7  0.000000000000009  Geobacter sulfurreducens PCA  Bacteria  normal  0.220244  n/a   
 
 
-
 
NC_012918  GM21_3964  methyl-accepting chemotaxis sensory transducer  84.76 
 
 
1608 bp  81.8  0.0000000000001  Geobacter sp. M21  Bacteria  n/a    hitchhiker  0.00000000000408371 
 
 
-
 
NC_011146  Gbem_3876  methyl-accepting chemotaxis sensory transducer  84.76 
 
 
1608 bp  81.8  0.0000000000001  Geobacter bemidjiensis Bem  Bacteria  normal  0.74566  n/a   
 
 
-
 
NC_010814  Glov_2890  methyl-accepting chemotaxis sensory transducer  81.25 
 
 
1650 bp  79.8  0.0000000000005  Geobacter lovleyi SZ  Bacteria  normal  0.824592  n/a   
 
 
-
 
NC_009707  JJD26997_0612  methyl-accepting chemotaxis protein  84.69 
 
 
1290 bp  75.8  0.000000000008  Campylobacter jejuni subsp. doylei 269.97  Bacteria  normal  n/a   
 
 
-
 
NC_009456  VC0395_0713  methyl-accepting chemotaxis protein  88.41 
 
 
1422 bp  73.8  0.00000000003  Vibrio cholerae O395  Bacteria  normal  n/a   
 
 
-
 
NC_012918  GM21_0039  methyl-accepting chemotaxis sensory transducer  84.95 
 
 
1548 bp  73.8  0.00000000003  Geobacter sp. M21  Bacteria  n/a    normal  0.0381098 
 
 
-
 
NC_009483  Gura_3311  methyl-accepting chemotaxis sensory transducer  81.75 
 
 
1644 bp  73.8  0.00000000003  Geobacter uraniireducens Rf4  Bacteria  normal  0.691655  n/a   
 
 
-
 
NC_004347  SO_3282  methyl-accepting chemotaxis protein  88.24 
 
 
2004 bp  71.9  0.0000000001  Shewanella oneidensis MR-1  Bacteria  n/a    n/a   
 
 
-
 
NC_012918  GM21_3719  methyl-accepting chemotaxis sensory transducer  90 
 
 
1623 bp  71.9  0.0000000001  Geobacter sp. M21  Bacteria  n/a    normal 
 
 
-
 
NC_011883  Ddes_1580  methyl-accepting chemotaxis sensory transducer  91.07 
 
 
2061 bp  71.9  0.0000000001  Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774  Bacteria  normal  n/a   
 
 
-
 
NC_010814  Glov_1286  methyl-accepting chemotaxis sensory transducer  82.61 
 
 
1617 bp  69.9  0.0000000005  Geobacter lovleyi SZ  Bacteria  normal  n/a   
 
 
-
 
NC_007517  Gmet_0712  methyl-accepting chemotaxis sensory transducer  84.21 
 
 
1653 bp  69.9  0.0000000005  Geobacter metallireducens GS-15  Bacteria  normal  normal 
 
 
-
 
NC_011146  Gbem_3611  methyl-accepting chemotaxis sensory transducer  89.83 
 
 
1623 bp  69.9  0.0000000005  Geobacter bemidjiensis Bem  Bacteria  normal  n/a   
 
 
-
 
NC_003912  CJE1253  methyl-accepting chemotaxis protein  83.67 
 
 
1290 bp  67.9  0.000000002  Campylobacter jejuni RM1221  Bacteria  normal  n/a   
 
 
-
 
NC_009456  VC0395_0331  methyl-accepting chemotaxis protein  84.44 
 
 
1737 bp  67.9  0.000000002  Vibrio cholerae O395  Bacteria  normal  n/a   
 
 
-
 
NC_008787  CJJ81176_1128  methyl-accepting chemotaxis protein  83.67 
 
 
1290 bp  67.9  0.000000002  Campylobacter jejuni subsp. jejuni 81-176  Bacteria  normal  n/a   
 
 
-
 
NC_008609  Ppro_2998  methyl-accepting chemotaxis sensory transducer  85.9 
 
 
1650 bp  67.9  0.000000002  Pelobacter propionicus DSM 2379  Bacteria  normal  n/a   
 
 
-
 
NC_011883  Ddes_0285  methyl-accepting chemotaxis sensory transducer with Cache sensor  88.71 
 
 
2154 bp  67.9  0.000000002  Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774  Bacteria  normal  n/a   
 
 
-
 
NC_013216  Dtox_3264  methyl-accepting chemotaxis sensory transducer  93.33 
 
 
1587 bp  65.9  0.000000008  Desulfotomaculum acetoxidans DSM 771  Bacteria  normal  normal 
 
 
-
 
NC_012918  GM21_3453  methyl-accepting chemotaxis sensory transducer  90.57 
 
 
1599 bp  65.9  0.000000008  Geobacter sp. M21  Bacteria  n/a    normal  0.0235494 
 
 
-
 
NC_007298  Daro_0926  histidine kinase, HAMP region: chemotaxis sensory transducer  84.27 
 
 
1620 bp  65.9  0.000000008  Dechloromonas aromatica RCB  Bacteria  normal  normal 
 
 
-
 
NC_007519  Dde_0703  methyl-accepting chemotaxis sensory transducer  87.69 
 
 
2418 bp  65.9  0.000000008  Desulfovibrio desulfuricans subsp. desulfuricans str. G20  Bacteria  normal  n/a   
 
 
-
 
NC_010814  Glov_0889  methyl-accepting chemotaxis sensory transducer  84.27 
 
 
1623 bp  65.9  0.000000008  Geobacter lovleyi SZ  Bacteria  normal  n/a   
 
 
-
 
NC_011126  HY04AAS1_0569  methyl-accepting chemotaxis sensory transducer  86.3 
 
 
1452 bp  65.9  0.000000008  Hydrogenobaculum sp. Y04AAS1  Bacteria  normal  n/a   
 
 
-
 
NC_009512  Pput_3628  methyl-accepting chemotaxis sensory transducer  87.5 
 
 
1566 bp  63.9  0.00000003  Pseudomonas putida F1  Bacteria  normal  normal 
 
 
-
 
NC_002939  GSU1374  methyl-accepting chemotaxis protein  93.18 
 
 
1626 bp  63.9  0.00000003  Geobacter sulfurreducens PCA  Bacteria  normal  n/a   
 
 
-
 
NC_002939  GSU2579  methyl-accepting chemotaxis protein  89.29 
 
 
1632 bp  63.9  0.00000003  Geobacter sulfurreducens PCA  Bacteria  normal  n/a   
 
 
-
 
NC_009483  Gura_0612  methyl-accepting chemotaxis sensory transducer  79.44 
 
 
1632 bp  63.9  0.00000003  Geobacter uraniireducens Rf4  Bacteria  normal  n/a   
 
 
-
 
NC_011146  Gbem_0728  methyl-accepting chemotaxis sensory transducer  86.76 
 
 
1614 bp  63.9  0.00000003  Geobacter bemidjiensis Bem  Bacteria  normal  n/a   
 
 
-
 
NC_007644  Moth_2029  methyl-accepting chemotaxis sensory transducer  85 
 
 
1659 bp  63.9  0.00000003  Moorella thermoacetica ATCC 39073  Bacteria  normal  normal 
 
 
-
 
NC_007912  Sde_0343  methyl-accepting chemotaxis sensory transducer  86.76 
 
 
1644 bp  63.9  0.00000003  Saccharophagus degradans 2-40  Bacteria  normal  0.0441023  normal  0.46066 
 
 
-
 
NC_008321  Shewmr4_2937  methyl-accepting chemotaxis sensory transducer  86.76 
 
 
1488 bp  63.9  0.00000003  Shewanella sp. MR-4  Bacteria  hitchhiker  0.000865197  normal  0.384283 
 
 
-
 
NC_008322  Shewmr7_3019  methyl-accepting chemotaxis sensory transducer  86.76 
 
 
1488 bp  63.9  0.00000003  Shewanella sp. MR-7  Bacteria  decreased coverage  0.00108184  normal 
 
 
-
 
NC_009457  VC0395_A0908  methyl-accepting chemotaxis protein  87.5 
 
 
1902 bp  63.9  0.00000003  Vibrio cholerae O395  Bacteria  hitchhiker  0.00000172893  n/a   
 
 
-
 
NC_011313  VSAL_II0443    91.49 
 
 
1856 bp  61.9  0.0000001  Aliivibrio salmonicida LFI1238  Bacteria  normal  0.733414  n/a   
 
 
-
 
NC_011883  Ddes_0300  methyl-accepting chemotaxis sensory transducer  88.14 
 
 
1758 bp  61.9  0.0000001  Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774  Bacteria  normal  n/a   
 
 
-
 
NC_009456  VC0395_0962  methyl-accepting chemotaxis protein  84.34 
 
 
1932 bp  61.9  0.0000001  Vibrio cholerae O395  Bacteria  hitchhiker  0.000917898  n/a   
 
 
-
 
NC_007492  Pfl01_4715  chemotaxis sensory transducer  84.85 
 
 
2142 bp  61.9  0.0000001  Pseudomonas fluorescens Pf0-1  Bacteria  normal  0.233277  normal  0.171171 
 
 
-
 
NC_007519  Dde_2734  methyl-accepting chemotaxis sensory transducer  88.14 
 
 
2256 bp  61.9  0.0000001  Desulfovibrio desulfuricans subsp. desulfuricans str. G20  Bacteria  normal  n/a   
 
 
-
 
NC_007796  Mhun_2069  methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor  89.09 
 
 
2103 bp  61.9  0.0000001  Methanospirillum hungatei JF-1  Archaea  normal  normal 
 
 
-
 
NC_007954  Sden_1601  chemotaxis sensory transducer  84.34 
 
 
1503 bp  61.9  0.0000001  Shewanella denitrificans OS217  Bacteria  normal  0.78336  n/a   
 
 
-
 
NC_008609  Ppro_3107  methyl-accepting chemotaxis sensory transducer  88.14 
 
 
1629 bp  61.9  0.0000001  Pelobacter propionicus DSM 2379  Bacteria  normal  n/a   
 
 
-
 
NC_008700  Sama_2140  putative methyl-accepting chemotaxis sensory transducer  83.91 
 
 
1440 bp  61.9  0.0000001  Shewanella amazonensis SB2B  Bacteria  normal  normal 
 
 
-
 
NC_004578  PSPTO_5160  methyl-accepting chemotaxis protein  90 
 
 
1944 bp  60  0.0000005  Pseudomonas syringae pv. tomato str. DC3000  Bacteria  normal  0.391343  n/a   
 
 
-
 
NC_011146  Gbem_0809  methyl-accepting chemotaxis sensory transducer  87.1 
 
 
1599 bp  60  0.0000005  Geobacter bemidjiensis Bem  Bacteria  normal  0.826751  n/a   
 
 
-
 
NC_008321  Shewmr4_1442  methyl-accepting chemotaxis sensory transducer  85.71 
 
 
1455 bp  60  0.0000005  Shewanella sp. MR-4  Bacteria  normal  normal 
 
 
-
 
NC_008751  Dvul_1280  methyl-accepting chemotaxis sensory transducer  87.1 
 
 
2403 bp  60  0.0000005  Desulfovibrio vulgaris DP4  Bacteria  normal  normal 
 
 
-
 
NC_009483  Gura_2845  methyl-accepting chemotaxis sensory transducer  80.6 
 
 
1650 bp  60  0.0000005  Geobacter uraniireducens Rf4  Bacteria  hitchhiker  0.000000597879  n/a   
 
 
-
 
NC_002939  GSU0400  methyl-accepting chemotaxis protein  81.9 
 
 
1650 bp  58  0.000002  Geobacter sulfurreducens PCA  Bacteria  normal  0.431065  n/a   
 
 
-
 
NC_003912  CJE0498  methyl-accepting chemotaxis protein  86.15 
 
 
1098 bp  58  0.000002  Campylobacter jejuni RM1221  Bacteria  normal  0.654005  n/a   
 
 
-
 
NC_004578  PSPTO_3480  methyl-accepting chemotaxis protein  87.72 
 
 
1602 bp  58  0.000002  Pseudomonas syringae pv. tomato str. DC3000  Bacteria  normal  0.0820031  n/a   
 
 
-
 
NC_010717  PXO_06142  chemotaxis protein  87.72 
 
 
1101 bp  58  0.000002  Xanthomonas oryzae pv. oryzae PXO99A  Bacteria  normal  0.0352354  n/a   
 
 
-
 
NC_011769  DvMF_2663  methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor  86.15 
 
 
1584 bp  58  0.000002  Desulfovibrio vulgaris str. 'Miyazaki F'  Bacteria  n/a    normal 
 
 
-
 
NC_011884  Cyan7425_1425  methyl-accepting chemotaxis sensory transducer  83.15 
 
 
2364 bp  58  0.000002  Cyanothece sp. PCC 7425  Bacteria  normal  0.68627  normal  0.569737 
 
 
-
 
NC_010814  Glov_2961  methyl-accepting chemotaxis sensory transducer  85.51 
 
 
1629 bp  58  0.000002  Geobacter lovleyi SZ  Bacteria  normal  n/a   
 
 
-
 
NC_007519  Dde_3246  methyl-accepting chemotaxis sensory transducer  86.15 
 
 
1806 bp  58  0.000002  Desulfovibrio desulfuricans subsp. desulfuricans str. G20  Bacteria  normal  0.416407  n/a   
 
 
-
 
NC_011769  DvMF_3060  methyl-accepting chemotaxis sensory transducer  86.15 
 
 
1980 bp  58  0.000002  Desulfovibrio vulgaris str. 'Miyazaki F'  Bacteria  n/a    normal  0.471114 
 
 
-
 
NC_007575  Suden_0209  methyl-accepting chemotaxis sensory transducer  84.42 
 
 
1977 bp  58  0.000002  Sulfurimonas denitrificans DSM 1251  Bacteria  normal  0.603066  n/a   
 
 
-
 
NC_009831  Ssed_3114  methyl-accepting chemotaxis sensory transducer  82.8 
 
 
2004 bp  58  0.000002  Shewanella sediminis HAW-EB3  Bacteria  normal  normal 
 
 
-
 
NC_012918  GM21_0525  methyl-accepting chemotaxis sensory transducer with Cache sensor  88.68 
 
 
1899 bp  58  0.000002  Geobacter sp. M21  Bacteria  n/a    normal 
 
 
-
 
NC_010717  PXO_01024  chemotaxis protein  87.72 
 
 
1101 bp  58  0.000002  Xanthomonas oryzae pv. oryzae PXO99A  Bacteria  normal  0.0730182  n/a   
 
 
-
 
NC_010814  Glov_1891  methyl-accepting chemotaxis sensory transducer  87.72 
 
 
1530 bp  58  0.000002  Geobacter lovleyi SZ  Bacteria  normal  0.745334  n/a   
 
 
-
 
NC_012918  GM21_3345  methyl-accepting chemotaxis sensory transducer  87.72 
 
 
1629 bp  58  0.000002  Geobacter sp. M21  Bacteria  n/a    normal  0.0226154 
 
 
-
 
NC_011769  DvMF_1881  methyl-accepting chemotaxis sensory transducer  86.15 
 
 
1779 bp  58  0.000002  Desulfovibrio vulgaris str. 'Miyazaki F'  Bacteria  n/a    normal 
 
 
-
 
NC_012918  GM21_3709  methyl-accepting chemotaxis sensory transducer with Cache sensor  87.5 
 
 
1641 bp  56  0.000008  Geobacter sp. M21  Bacteria  n/a    normal 
 
 
-
 
NC_004347  SO_0987  methyl-accepting chemotaxis protein  85.29 
 
 
1665 bp  56  0.000008  Shewanella oneidensis MR-1  Bacteria  n/a    n/a   
 
 
-
 
NC_009831  Ssed_1983  methyl-accepting chemotaxis sensory transducer  89.58 
 
 
1647 bp  56  0.000008  Shewanella sediminis HAW-EB3  Bacteria  decreased coverage  0.000213036  normal  0.437149 
 
 
-
 
NC_010814  Glov_0461  methyl-accepting chemotaxis sensory transducer  83.75 
 
 
1710 bp  56  0.000008  Geobacter lovleyi SZ  Bacteria  normal  n/a   
 
 
-
 
NC_007575  Suden_0283  methyl-accepting chemotaxis sensory transducer  85.29 
 
 
1329 bp  56  0.000008  Sulfurimonas denitrificans DSM 1251  Bacteria  normal  0.0447763  n/a   
 
 
-
 
NC_007908  Rfer_0902  methyl-accepting chemotaxis sensory transducer  83.75 
 
 
1653 bp  56  0.000008  Rhodoferax ferrireducens T118  Bacteria  normal  n/a   
 
 
-
 
NC_010814  Glov_3525  methyl-accepting chemotaxis sensory transducer  86.67 
 
 
1977 bp  56  0.000008  Geobacter lovleyi SZ  Bacteria  normal  n/a   
 
 
-
 
NC_009052  Sbal_0691  methyl-accepting chemotaxis sensory transducer  82.61 
 
 
1863 bp  56  0.000008  Shewanella baltica OS155  Bacteria  normal  n/a   
 
 
-
 
NC_010506  Swoo_3605  methyl-accepting chemotaxis sensory transducer  84.72 
 
 
2001 bp  56  0.000008  Shewanella woodyi ATCC 51908  Bacteria  normal  0.644417  normal 
 
 
-
 
NC_010506  Swoo_4441  methyl-accepting chemotaxis sensory transducer  85.29 
 
 
1965 bp  56  0.000008  Shewanella woodyi ATCC 51908  Bacteria  normal  normal 
 
 
-
 
NC_008577  Shewana3_3116  methyl-accepting chemotaxis sensory transducer  85.29 
 
 
1488 bp  56  0.000008  Shewanella sp. ANA-3  Bacteria  hitchhiker  0.00299178  normal 
 
 
-
 
NC_008607  Ppro_3805  methyl-accepting chemotaxis sensory transducer  86.67 
 
 
1269 bp  56  0.000008  Pelobacter propionicus DSM 2379  Bacteria  hitchhiker  0.000721713  n/a   
 
 
-
 
NC_009901  Spea_1629  methyl-accepting chemotaxis sensory transducer with Cache sensor  100 
 
 
1872 bp  56  0.000008  Shewanella pealeana ATCC 700345  Bacteria  normal  0.438395  n/a   
 
 
-
 
NC_012918  GM21_1357  methyl-accepting chemotaxis sensory transducer  96.88 
 
 
1179 bp  56  0.000008  Geobacter sp. M21  Bacteria  n/a    hitchhiker  3.9116599999999996e-27 
 
 
-
 
NC_008740  Maqu_3644  methyl-accepting chemotaxis sensory transducer  87.5 
 
 
1137 bp  56  0.000008  Marinobacter aquaeolei VT8  Bacteria  normal  n/a   
 
 
-
 
NC_011830  Dhaf_3784  methyl-accepting chemotaxis sensory transducer  96.88 
 
 
1506 bp  56  0.000008  Desulfitobacterium hafniense DCB-2  Bacteria  normal  n/a   
 
 
-
 
NC_011883  Ddes_0086  methyl-accepting chemotaxis sensory transducer with Cache sensor  86.44 
 
 
1800 bp  54  0.00003  Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774  Bacteria  normal  n/a   
 
 
-
 
NC_007005  Psyr_1789  chemotaxis sensory transducer  83.13 
 
 
1641 bp  54  0.00003  Pseudomonas syringae pv. syringae B728a  Bacteria  normal  0.478165  decreased coverage  0.000703042 
 
 
-
 
NC_009438  Sputcn32_3052  methyl-accepting chemotaxis sensory transducer  86.44 
 
 
1665 bp  54  0.00003  Shewanella putrefaciens CN-32  Bacteria  normal  n/a   
 
 
-
 
NC_007644  Moth_1487  methyl-accepting chemotaxis sensory transducer  89.36 
 
 
1980 bp  54  0.00003  Moorella thermoacetica ATCC 39073  Bacteria  hitchhiker  0.00000879913  normal 
 
 
-
 
NC_007912  Sde_1108  putative methyl-accepting chemotaxis sensory transducer  83.13 
 
 
1620 bp  54  0.00003  Saccharophagus degradans 2-40  Bacteria  normal  normal 
 
 
-
 
NC_011899  Hore_21590  methyl-accepting chemotaxis sensory transducer  86.44 
 
 
1503 bp  54  0.00003  Halothermothrix orenii H 168  Bacteria  normal  n/a   
 
 
-
 
NC_008228  Patl_4183  methyl-accepting chemotaxis sensory transducer  96.77 
 
 
1446 bp  54  0.00003  Pseudoalteromonas atlantica T6c  Bacteria  normal  n/a   
 
 
-
 
NC_008789  Hhal_1714  methyl-accepting chemotaxis sensory transducer  81.82 
 
 
2022 bp  54  0.00003  Halorhodospira halophila SL1  Bacteria  normal  0.712235  n/a   
 
 
-
 
NC_010814  Glov_2507  methyl-accepting chemotaxis sensory transducer  88.24 
 
 
2457 bp  54  0.00003  Geobacter lovleyi SZ  Bacteria  hitchhiker  0.00215675  n/a   
 
 
-
 
NC_008740  Maqu_2374  methyl-accepting chemotaxis sensory transducer  82.76 
 
 
1221 bp  54  0.00003  Marinobacter aquaeolei VT8  Bacteria  normal  n/a   
 
 
-
 
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