| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mhun_2069 |
|---|
| Symbol | |
|---|
| ID | 3923719 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methanospirillum hungatei JF-1 |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_007796 |
|---|
| Strand | + |
|---|
| Start bp | 2341772 |
|---|
| End bp | 2343874 |
|---|
| Gene Length | 2103 bp |
|---|
| Protein Length | 700 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 49% |
|---|
| IMG OID | 637897675 |
|---|
| Product | methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor |
|---|
| Protein accession | YP_503495 |
|---|
| Protein GI | 88603317 |
|---|
| COG category | [N] Cell motility
[T] Signal transduction mechanisms |
|---|
| COG ID | [COG0840] Methyl-accepting chemotaxis protein |
|---|
| TIGRFAM ID | [TIGR00229] PAS domain S-box |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 22 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 15 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACCGAGA GCATACACAG CAGGATAGAT CCTGATATCC TGCAGACTCT CCTTGACCAG
AATCCTGTTG CAATGGCCCA GTTTGACACC CAGTTTCATT TTGTATATGC AAACCAGGCA
TTTTGTGATC TCTCCGGAAT CGCTTTTGAA AAGCTGATCG GGACCAGAAT TTCAGACCTG
AAGATCGTAA AACTGGAAGG GGAAGGATCC AAAGCGGCCA TCGAAGAGAA GCGAAGAGGA
AAGGCCCGGA TAGAGGTTGA GTTTCCATCC GGATTTAAAA TACTGAACGC CTATACCATC
CCGGTTCTGG ACGCAGAGAA AAATGTCACA TCAGCTCTCG GAGTATATAC GGATATTACC
GCTGAAGAGT GGGAAAAACT GAAGACTTCA CAGATAATTG AGAATAATCC CATCCCATTC
CTGTTATTAA AGACCGACCT GGGAATTGAA GGAACCAACA CGGCATTTTT AAAAATGACC
GGGTATACCA CGGACCAGTT ATTAAGGATG AAACTCCCCG ATTTTCAGAT TCTGAAACTG
GAGGGAAAAT CTGCACGTGA TTGTATTACT TCAAAAAAAG AGGCAATTAG CGATGCATTC
ATTGATTTTC CATCAGGCAA GAAATATATC AGGCTCTATT CCATCCCGCT TCTTGATAAG
AAGAACGAGG TAAACTCGGT TCTCATCACC TGTGTGGACC TGACCCCCCA GAGACGGCTG
GCTGAATATC AGCAGACAGA AGTTGAACGT CTTGCACAGA ACCTTCAGAA CCTGGCAAAG
GGAGATCTGC ACTTTGATCT AGCCACCGGT CAGCCGGATG AATATACAAA AGAGGCCCAT
GCACAGTTTG CCACCATTCA GGAGAACCTG AAATTAGCAG GAGATAACCT GACCGGAGTA
ACCAAAGAGA TGGATCGGCT CATCCAGGCG ATAACGGCAG GAAACCTGAA AATCATGGGG
GAGGCAGACA AATTCGCCGG CACATATCAG GAGATCATAA ATGGCCTGAA CAGGGTCGTA
AAGACGGTTG ATGTTCAGGT ATCTGCAGCA ATAACTCTGT CCGGTGAATA TGCAAAGGGA
AATTTCTCGG TAATCCCTCC AGATATCAAG GCGGAAGGAG ACTTTCTTAT CTTAAAGGAA
GCACTGATGA ACATCGGAGT CCAGGTCTCT GCCGTGCTGA AAGAGATCGA CCGGGAGATG
GAAGAACTCA CGACCAGGGC CGAAGAAGCA AACGCCGGGG TGAAGGATGT TGCAGAAGGG
TCTGCCATGG TGGCAAAGAA TGCCGCAGAG GTTGGCAGCC AGAGTGAGCG GGGGAAACAG
AATATCGACC AGGTTCTCCG GGCCATGATG GATCTCTCGG CAAATGTGGA GGAGGTGGCA
TCAAGCACCG AATCAGTCAG CAAAGTCACC CACGACACCG ATGAACTCTC AAAGAAAGGG
GTTGAACTTG CGCATAATGC AGAAAACGGC ATGAAAGGGA TCATGGCATC CTCCGGTGAG
GTGGAGCGGA TCATCACCGA GATCAAGGGT GAGATGGCAC AAATTGGAAA GATTGTGAAT
GTTATCACGG ATATTGCCAG CCAGACCAAC CTTCTTGCCC TCAATGCTGC CATTGAAGCA
GCCCGTGCCG GTGAAGCAGG ACGGGGGTTT GCCGTTGTTG CAAGTGAAGT CAAAGCCCTT
GCACTTGAGT CACGGCGGTC TGCAGAAAAT ATCGCCGAGA TGATAACCAG CCTGCAGAAA
AAGTCTGATG AAGCAGCAAA GGCAATGGAC CAGGCAGAGA ATACCGTATC ACAAGGAAAT
GAGGCGGTTC TTGAAACCCT CAATATTTTC AACCAGATCG TAGAGTCGGT CGGACAGATT
GCCAGGAACA TGGATGATGT GTCAAAGACC ACCGAGCAGC AGGCGGCGTC TGTTGAAGAG
ATTACCGCAA GTGCTCATGA AGTGAACAGT CTGGTCGGGG AGATTGCAAC CGAAGCAATA
TCCGCAGCAT CTGCAGCAGA GCAGAGCTCA GCCGGGACCA GCCAGATTGT CACGGTGGTT
GAGGATCTGA ATAAAATAAT TATTGAAGTA TCCAGGGCAA TCGGGAAGTT TCAGTATCGA
TAA
|
|---|
| Protein sequence | MTESIHSRID PDILQTLLDQ NPVAMAQFDT QFHFVYANQA FCDLSGIAFE KLIGTRISDL
KIVKLEGEGS KAAIEEKRRG KARIEVEFPS GFKILNAYTI PVLDAEKNVT SALGVYTDIT
AEEWEKLKTS QIIENNPIPF LLLKTDLGIE GTNTAFLKMT GYTTDQLLRM KLPDFQILKL
EGKSARDCIT SKKEAISDAF IDFPSGKKYI RLYSIPLLDK KNEVNSVLIT CVDLTPQRRL
AEYQQTEVER LAQNLQNLAK GDLHFDLATG QPDEYTKEAH AQFATIQENL KLAGDNLTGV
TKEMDRLIQA ITAGNLKIMG EADKFAGTYQ EIINGLNRVV KTVDVQVSAA ITLSGEYAKG
NFSVIPPDIK AEGDFLILKE ALMNIGVQVS AVLKEIDREM EELTTRAEEA NAGVKDVAEG
SAMVAKNAAE VGSQSERGKQ NIDQVLRAMM DLSANVEEVA SSTESVSKVT HDTDELSKKG
VELAHNAENG MKGIMASSGE VERIITEIKG EMAQIGKIVN VITDIASQTN LLALNAAIEA
ARAGEAGRGF AVVASEVKAL ALESRRSAEN IAEMITSLQK KSDEAAKAMD QAENTVSQGN
EAVLETLNIF NQIVESVGQI ARNMDDVSKT TEQQAASVEE ITASAHEVNS LVGEIATEAI
SAASAAEQSS AGTSQIVTVV EDLNKIIIEV SRAIGKFQYR
|
|---|
| |