| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | DvMF_1881 |
|---|
| Symbol | |
|---|
| ID | 7173798 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Desulfovibrio vulgaris str. 'Miyazaki F' |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011769 |
|---|
| Strand | + |
|---|
| Start bp | 2315847 |
|---|
| End bp | 2317625 |
|---|
| Gene Length | 1779 bp |
|---|
| Protein Length | 592 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | 643540396 |
|---|
| Product | methyl-accepting chemotaxis sensory transducer |
|---|
| Protein accession | YP_002436292 |
|---|
| Protein GI | 218886971 |
|---|
| COG category | [N] Cell motility
[T] Signal transduction mechanisms |
|---|
| COG ID | [COG0840] Methyl-accepting chemotaxis protein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | n/a |
|---|
| Plasmid unclonability p-value | n/a |
|---|
| Plasmid hitchhiking | n/a |
|---|
| Plasmid clonability | n/a |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 86 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAAATTCC TCCGCCAGTT CGGCATTACC ACCCGGCTTG TCGTCCTCTC GCTGCTGGCA
TTTTTCTTCA TCGGCGCCGC TGGCATGGCA GGCTGGATGG GGGCGCGCGT CATACAGGAA
AACCTGAAGG ACGTTTCCAA CGTCCGGCTG CCCGGGCTGA ATTTCCTGAT ACAGGCCGAC
CGTGACCTGC AACAGTTGCT GGTGGCTGAG CGCTCACTGT TGTTTGCAGA TCCTGCGGAC
AAGAAACTTA TCGAGCGACT GAAGAAAGAA TACGAAGACA ACCTGCGCCA GTCGGACGAA
CGCTGGAACA AGTACAAGAA GCTGCCCCTT GACGAGCCGG CCAGGCCGCT CATTCCGCAG
TACGACGCGG CCCGCGCCAC CTGGATGCCC CTTTCGCGCG CAGTGGTGGA CGCCGCCCTT
TCCGGCGACC CGGCGGCGCG CCAGAAGGCC GCCGCAAGCT CGCTGGGCGA CGTGGGCGTG
AAATTCGAGG CCATGCGCGA GGTCATCAAC CAGCTGACCG AAATCATCGA GCAGGCGGCC
AAGGCGGATA ATGCCGAAGC CGACGCCAGC TACGACGACA CCATGTTCCG GCTGGCCGGG
GCCACCACCT TGGCGTTGCT GGTGCTGGCC GGATTCGCCA TCGCCATTAC CCGGTCGGTC
ACCGTGCCGC TGAAGCGCAC CGTTGCCTAT TCCGAAGCCG TATCGCGCGG GGCGCTGGAA
GAATGCCTGG CCGTGGACGC CCGTGACGAA GTGGGCGTGC TGGCCGAATG CCTGTGCCGC
ATGGTGTCCA CACTGAAGGA CAAGATAGGC GAGGCCGATT CCCGTTCGGC GGAGGCCCGC
GCCGAATCGG AACGGGCCAG GCAGGCATCC GCCGAGGCGG AAGCGGCCCG CCGCATGGCG
GAATCTGCCA AGCGCGACGG CATGTTGCAT GCCGCCGACA CCCTGACGGG CGTCACCGGC
GTTCTCGGTT CCGCCTCCGA GGAACTGGCC GCGCAGATAG AGCAGGCCAG CCGGGGCGCG
GAACACCAGA TGCAGCGCGT GTCCGAGACC GCCACGGCCA TGGAAGAGAT GAACGCCACG
GTGCTTGAGG TGGCGCGCAG CGCCGGTGAA GCCGCCGGTT CCGCCGAAAG CGCCCGCGAC
AAGGCCGTCA GCGGCCAGGA CGTGGTGCGC CAGGTGGTGG CGGGCATCGG ACAGGTGCAG
CAGACCGCCG ACCAGCTCAA GGCCGACATG GCCGAACTGG GTCGCCAGGC CGAGGACATC
GGCCGGGTGA TGACCGTGAT CAACGACATC GCCGACCAGA CCAACCTGCT GGCGCTGAAC
GCCGCCATCG AGGCAGCCCG CGCCGGTGAC GCCGGGCGCG GATTCGCCGT GGTGGCCGAC
GAGGTGCGCA AGCTGGCCGA AAAGACCATG CTGGCCACCA AGGAGGTGGG GCAGGCCATC
GCGGGCATCC AGAGCGGCAC CCGCCGCAAT GTGGGGCATG TGGAGGACAC TGTGCAGCAC
GTGCAGCAGG TGACCCGCCT GGCCACGGAG TCGGGCGAGT CGCTGGGGGT CATCGTGGAC
CTGGCGGCCT CGGTGTCCGA CCAGGTGCGG TCCATTGCCA CGGCCAGCGA GGAGCAGTCC
GCCGCCAGCG AGGAAATCAA CCGGTCCATC GAGGACATCA GCCGGGTTTC CGCCGAATCC
GCCGAGGTGA TGCGCCAGTC CGCCGTCGCC GTGGCCGAGA TGGCCCAGCA GACGCACGTG
TTGCAGGGGC TTATCCGAAA GATGCGCGAA GACGGCTAG
|
|---|
| Protein sequence | MKFLRQFGIT TRLVVLSLLA FFFIGAAGMA GWMGARVIQE NLKDVSNVRL PGLNFLIQAD
RDLQQLLVAE RSLLFADPAD KKLIERLKKE YEDNLRQSDE RWNKYKKLPL DEPARPLIPQ
YDAARATWMP LSRAVVDAAL SGDPAARQKA AASSLGDVGV KFEAMREVIN QLTEIIEQAA
KADNAEADAS YDDTMFRLAG ATTLALLVLA GFAIAITRSV TVPLKRTVAY SEAVSRGALE
ECLAVDARDE VGVLAECLCR MVSTLKDKIG EADSRSAEAR AESERARQAS AEAEAARRMA
ESAKRDGMLH AADTLTGVTG VLGSASEELA AQIEQASRGA EHQMQRVSET ATAMEEMNAT
VLEVARSAGE AAGSAESARD KAVSGQDVVR QVVAGIGQVQ QTADQLKADM AELGRQAEDI
GRVMTVINDI ADQTNLLALN AAIEAARAGD AGRGFAVVAD EVRKLAEKTM LATKEVGQAI
AGIQSGTRRN VGHVEDTVQH VQQVTRLATE SGESLGVIVD LAASVSDQVR SIATASEEQS
AASEEINRSI EDISRVSAES AEVMRQSAVA VAEMAQQTHV LQGLIRKMRE DG
|
|---|
| |