More than 300 homologs were found in PanDaTox collection
for query gene GSU2693 on replicon NC_002939
Organism: Geobacter sulfurreducens PCA



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_002939  GSU2693  response regulator  100 
 
 
128 aa  258  3e-68  Geobacter sulfurreducens PCA  Bacteria  normal  n/a   
 
 
-
 
NC_007517  Gmet_1220  response regulator receiver domain-containing protein  36.89 
 
 
143 aa  88.2  4e-17  Geobacter metallireducens GS-15  Bacteria  normal  hitchhiker  0.000878383 
 
 
-
 
NC_013501  Rmar_2518  response regulator receiver protein  42.34 
 
 
519 aa  87  9e-17  Rhodothermus marinus DSM 4252  Bacteria  normal  0.487815  n/a   
 
 
-
 
NC_009483  Gura_1326  response regulator receiver protein  39.29 
 
 
122 aa  84.7  4e-16  Geobacter uraniireducens Rf4  Bacteria  hitchhiker  0.00000300613  n/a   
 
 
-
 
NC_008255  CHU_1040  two-component response regulator  33.61 
 
 
518 aa  82.8  0.000000000000001  Cytophaga hutchinsonii ATCC 33406  Bacteria  normal  0.429651  normal 
 
 
-
 
NC_013730  Slin_3042  response regulator receiver protein  36.21 
 
 
524 aa  82.8  0.000000000000001  Spirosoma linguale DSM 74  Bacteria  normal  normal  0.0742856 
 
 
-
 
NC_014230  CA2559_08151  response regulator  37.93 
 
 
516 aa  83.2  0.000000000000001  Croceibacter atlanticus HTCC2559  Bacteria  normal  n/a   
 
 
-
 
NC_009943  Dole_2331  response regulator receiver protein  33.9 
 
 
142 aa  80.1  0.000000000000009  Desulfococcus oleovorans Hxd3  Bacteria  hitchhiker  0.00000000425244  n/a   
 
 
-
 
NC_009441  Fjoh_2906  response regulator receiver protein  35.34 
 
 
517 aa  79  0.00000000000002  Flavobacterium johnsoniae UW101  Bacteria  normal  0.568683  n/a   
 
 
-
 
NC_002939  GSU1417  response regulator  37.5 
 
 
141 aa  78.2  0.00000000000004  Geobacter sulfurreducens PCA  Bacteria  normal  n/a   
 
 
-
 
NC_008751  Dvul_0173  response regulator receiver protein  32.5 
 
 
121 aa  76.6  0.00000000000009  Desulfovibrio vulgaris DP4  Bacteria  normal  normal 
 
 
-
 
NC_009675  Anae109_2439  response regulator receiver protein  40.17 
 
 
238 aa  76.6  0.0000000000001  Anaeromyxobacter sp. Fw109-5  Bacteria  normal  0.762702  normal  0.846145 
 
 
-
 
NC_013132  Cpin_1282  response regulator receiver protein  32.76 
 
 
517 aa  76.6  0.0000000000001  Chitinophaga pinensis DSM 2588  Bacteria  hitchhiker  0.00300616  normal 
 
 
-
 
NC_013037  Dfer_5047  response regulator receiver protein  35.71 
 
 
521 aa  76.3  0.0000000000001  Dyadobacter fermentans DSM 18053  Bacteria  normal  normal 
 
 
-
 
NC_009943  Dole_1348  response regulator receiver protein  34.55 
 
 
173 aa  75.5  0.0000000000002  Desulfococcus oleovorans Hxd3  Bacteria  normal  n/a   
 
 
-
 
NC_007760  Adeh_1328  response regulator receiver domain-containing protein  38.46 
 
 
240 aa  75.9  0.0000000000002  Anaeromyxobacter dehalogenans 2CP-C  Bacteria  normal  n/a   
 
 
-
 
NC_007963  Csal_0246  nitrogen metabolism transcriptional regulator, NtrC, Fis family  36 
 
 
469 aa  75.9  0.0000000000002  Chromohalobacter salexigens DSM 3043  Bacteria  normal  0.487777  n/a   
 
 
-
 
NC_011891  A2cp1_2627  response regulator receiver protein  38.46 
 
 
240 aa  75.9  0.0000000000002  Anaeromyxobacter dehalogenans 2CP-1  Bacteria  normal  0.641893  n/a   
 
 
-
 
NC_008554  Sfum_3111  two component, sigma54 specific, Fis family transcriptional regulator  36 
 
 
458 aa  75.9  0.0000000000002  Syntrophobacter fumaroxidans MPOB  Bacteria  normal  normal 
 
 
-
 
NC_013061  Phep_4282  PglZ domain protein  36.21 
 
 
518 aa  74.3  0.0000000000005  Pedobacter heparinus DSM 2366  Bacteria  normal  0.769544  normal 
 
 
-
 
NC_011769  DvMF_1096  multi-sensor hybrid histidine kinase  38.53 
 
 
1548 aa  73.2  0.000000000001  Desulfovibrio vulgaris str. 'Miyazaki F'  Bacteria  n/a    normal  0.363033 
 
 
-
 
NC_009943  Dole_2739  two component, sigma54 specific, Fis family transcriptional regulator  32.74 
 
 
451 aa  73.2  0.000000000001  Desulfococcus oleovorans Hxd3  Bacteria  normal  0.693002  n/a   
 
 
-
 
NC_009523  RoseRS_1088  two component transcriptional regulator  38.96 
 
 
264 aa  72.8  0.000000000001  Roseiflexus sp. RS-1  Bacteria  normal  normal  0.237646 
 
 
-
 
NC_010814  Glov_1377  two component, sigma54 specific, transcriptional regulator, Fis family  33.64 
 
 
462 aa  72.4  0.000000000002  Geobacter lovleyi SZ  Bacteria  normal  0.244526  n/a   
 
 
-
 
NC_010814  Glov_1694  two component, sigma54 specific, transcriptional regulator, Fis family  31.25 
 
 
472 aa  72  0.000000000002  Geobacter lovleyi SZ  Bacteria  normal  n/a   
 
 
-
 
NC_012918  GM21_0684  two component, sigma54 specific, transcriptional regulator, Fis family  33.33 
 
 
469 aa  72.4  0.000000000002  Geobacter sp. M21  Bacteria  n/a    hitchhiker  0.0000000000150794 
 
 
-
 
NC_011145  AnaeK_2531  response regulator receiver protein  36.75 
 
 
240 aa  72.8  0.000000000002  Anaeromyxobacter sp. K  Bacteria  normal  n/a   
 
 
-
 
NC_011146  Gbem_0671  two component, sigma54 specific, transcriptional regulator, Fis family  33.33 
 
 
469 aa  71.6  0.000000000003  Geobacter bemidjiensis Bem  Bacteria  normal  n/a   
 
 
-
 
NC_002950  PG0928  response regulator  36.04 
 
 
518 aa  71.6  0.000000000003  Porphyromonas gingivalis W83  Bacteria  n/a    normal  0.581359 
 
 
-
 
NC_009253  Dred_2001  two component, sigma54 specific, Fis family transcriptional regulator  33.93 
 
 
454 aa  72  0.000000000003  Desulfotomaculum reducens MI-1  Bacteria  normal  n/a   
 
 
-
 
NC_011831  Cagg_3065  response regulator receiver protein  36.28 
 
 
128 aa  71.2  0.000000000004  Chloroflexus aggregans DSM 9485  Bacteria  normal  0.735156  hitchhiker  0.0000890784 
 
 
-
 
NC_011060  Ppha_0700  multi-sensor hybrid histidine kinase  35.29 
 
 
1419 aa  71.2  0.000000000004  Pelodictyon phaeoclathratiforme BU-1  Bacteria  normal  0.81616  n/a   
 
 
-
 
NC_008789  Hhal_0366  multi-sensor hybrid histidine kinase  32.26 
 
 
1266 aa  71.2  0.000000000004  Halorhodospira halophila SL1  Bacteria  normal  0.926091  n/a   
 
 
-
 
NC_007520  Tcr_0754  response regulator receiver domain-containing protein  33.91 
 
 
120 aa  71.2  0.000000000005  Thiomicrospira crunogena XCL-2  Bacteria  normal  n/a   
 
 
-
 
NC_009767  Rcas_2795  two component transcriptional regulator  37.66 
 
 
266 aa  71.2  0.000000000005  Roseiflexus castenholzii DSM 13941  Bacteria  normal  normal 
 
 
-
 
NC_009674  Bcer98_3857  response regulator receiver protein  31.86 
 
 
122 aa  71.2  0.000000000005  Bacillus cytotoxicus NVH 391-98  Bacteria  normal  0.161717  n/a   
 
 
-
 
NC_008639  Cpha266_1787  PAS/PAC sensor hybrid histidine kinase  31.97 
 
 
931 aa  71.2  0.000000000005  Chlorobium phaeobacteroides DSM 266  Bacteria  normal  n/a   
 
 
-
 
NC_011369  Rleg2_2043  PAS/PAC sensor hybrid histidine kinase  38.6 
 
 
691 aa  70.9  0.000000000006  Rhizobium leguminosarum bv. trifolii WSM2304  Bacteria  normal  0.10086  normal 
 
 
-
 
NC_009832  Spro_3651  two component, sigma54 specific, Fis family transcriptional regulator  35.92 
 
 
445 aa  70.9  0.000000000006  Serratia proteamaculans 568  Bacteria  normal  normal 
 
 
-
 
NC_010465  YPK_1259  two component, sigma54 specific, Fis family transcriptional regulator  35.92 
 
 
445 aa  70.5  0.000000000007  Yersinia pseudotuberculosis YPIII  Bacteria  normal  n/a   
 
 
-
 
NC_010159  YpAngola_A3629  two-component system response regulator  35.92 
 
 
445 aa  70.5  0.000000000007  Yersinia pestis Angola  Bacteria  normal  normal 
 
 
-
 
NC_009708  YpsIP31758_1152  sigma-54 dependent DNA-binding response regulator  35.92 
 
 
445 aa  70.5  0.000000000007  Yersinia pseudotuberculosis IP 31758  Bacteria  normal  n/a   
 
 
-
 
NC_010424  Daud_1908  histidine kinase  38.74 
 
 
772 aa  70.5  0.000000000008  Candidatus Desulforudis audaxviator MP104C  Bacteria  normal  0.0199543  n/a   
 
 
-
 
NC_012917  PC1_3049  putative two component, sigma54 specific, transcriptional regulator, Fis family  34.95 
 
 
445 aa  70.5  0.000000000008  Pectobacterium carotovorum subsp. carotovorum PC1  Bacteria  normal  n/a   
 
 
-
 
NC_013421  Pecwa_1226  putative two component, sigma54 specific, transcriptional regulator, Fis family  34.95 
 
 
445 aa  70.5  0.000000000008  Pectobacterium wasabiae WPP163  Bacteria  normal  n/a   
 
 
-
 
NC_012912  Dd1591_1085  putative two component, sigma54 specific, transcriptional regulator, Fis family  34.95 
 
 
445 aa  69.7  0.00000000001  Dickeya zeae Ech1591  Bacteria  normal  n/a   
 
 
-
 
NC_002939  GSU1495  sigma-54 dependent DNA-binding response regulator  33.33 
 
 
458 aa  69.7  0.00000000001  Geobacter sulfurreducens PCA  Bacteria  normal  0.301103  n/a   
 
 
-
 
NC_014230  CA2559_09498  two-component system, transcriptional regulatory protein  32.52 
 
 
236 aa  69.3  0.00000000001  Croceibacter atlanticus HTCC2559  Bacteria  normal  n/a   
 
 
-
 
NC_007348  Reut_B4471  PAS/PAC sensor hybrid histidine kinase  32.79 
 
 
678 aa  70.1  0.00000000001  Ralstonia eutropha JMP134  Bacteria  hitchhiker  0.00885051  n/a   
 
 
-
 
NC_009943  Dole_1777  two component, sigma54 specific, Fis family transcriptional regulator  32.5 
 
 
465 aa  69.7  0.00000000001  Desulfococcus oleovorans Hxd3  Bacteria  normal  n/a   
 
 
-
 
NC_012880  Dd703_2768  putative two component, sigma54 specific, transcriptional regulator, Fis family  34.95 
 
 
445 aa  69.7  0.00000000001  Dickeya dadantii Ech703  Bacteria  normal  n/a   
 
 
-
 
NC_008228  Patl_1603  two component, sigma54 specific, Fis family transcriptional regulator  36.22 
 
 
449 aa  70.1  0.00000000001  Pseudoalteromonas atlantica T6c  Bacteria  normal  n/a   
 
 
-
 
NC_010814  Glov_2786  two component, sigma54 specific, transcriptional regulator, Fis family  34.43 
 
 
480 aa  70.1  0.00000000001  Geobacter lovleyi SZ  Bacteria  normal  0.543097  n/a   
 
 
-
 
NC_008528  OEOE_1773  DNA-binding response regulator  32.2 
 
 
224 aa  69.7  0.00000000001  Oenococcus oeni PSU-1  Bacteria  normal  n/a   
 
 
-
 
NC_008531  LEUM_0956  DNA-binding response regulator  29.06 
 
 
223 aa  69.7  0.00000000001  Leuconostoc mesenteroides subsp. mesenteroides ATCC 8293  Bacteria  normal  0.504019  n/a   
 
 
-
 
NC_010001  Cphy_1679  two component transcriptional regulator  33.05 
 
 
224 aa  69.7  0.00000000001  Clostridium phytofermentans ISDg  Bacteria  normal  n/a   
 
 
-
 
NC_009675  Anae109_1530  response regulator receiver protein  34.43 
 
 
127 aa  69.7  0.00000000001  Anaeromyxobacter sp. Fw109-5  Bacteria  normal  0.754323  normal 
 
 
-
 
NC_009675  Anae109_1951  two component, sigma54 specific, Fis family transcriptional regulator  38.61 
 
 
470 aa  69.7  0.00000000001  Anaeromyxobacter sp. Fw109-5  Bacteria  normal  0.516267  normal 
 
 
-
 
NC_010571  Oter_0999  response regulator receiver modulated serine phosphatase  38.32 
 
 
602 aa  68.9  0.00000000002  Opitutus terrae PB90-1  Bacteria  normal  0.118416  hitchhiker  0.00369461 
 
 
-
 
NC_011145  AnaeK_1971  two component, sigma54 specific, transcriptional regulator, Fis family  36.63 
 
 
473 aa  69.3  0.00000000002  Anaeromyxobacter sp. K  Bacteria  normal  0.0887215  n/a   
 
 
-
 
NC_009943  Dole_1977  response regulator receiver protein  34.71 
 
 
265 aa  68.9  0.00000000002  Desulfococcus oleovorans Hxd3  Bacteria  normal  n/a   
 
 
-
 
NC_007512  Plut_0344  two component Fis family transcriptional regulator  33.61 
 
 
452 aa  69.3  0.00000000002  Chlorobium luteolum DSM 273  Bacteria  normal  0.0882822  normal  0.355114 
 
 
-
 
NC_011891  A2cp1_2056  two component, sigma54 specific, transcriptional regulator, Fis family  36.63 
 
 
473 aa  69.3  0.00000000002  Anaeromyxobacter dehalogenans 2CP-1  Bacteria  normal  0.732718  n/a   
 
 
-
 
NC_007760  Adeh_1908  two component, sigma54 specific, Fis family transcriptional regulator  36.63 
 
 
473 aa  69.3  0.00000000002  Anaeromyxobacter dehalogenans 2CP-C  Bacteria  normal  n/a   
 
 
-
 
NC_011146  Gbem_1522  two component, sigma54 specific, transcriptional regulator, Fis family  31.9 
 
 
461 aa  68.9  0.00000000002  Geobacter bemidjiensis Bem  Bacteria  normal  n/a   
 
 
-
 
NC_008554  Sfum_0648  response regulator receiver protein  29.27 
 
 
151 aa  68.9  0.00000000002  Syntrophobacter fumaroxidans MPOB  Bacteria  normal  normal 
 
 
-
 
NC_008740  Maqu_1888  response regulator receiver protein  37.14 
 
 
365 aa  69.3  0.00000000002  Marinobacter aquaeolei VT8  Bacteria  normal  0.660438  n/a   
 
 
-
 
NC_009802  CCC13826_0386  two component transcriptional regulator  28.81 
 
 
222 aa  68.9  0.00000000002  Campylobacter concisus 13826  Bacteria  normal  n/a   
 
 
-
 
NC_012918  GM21_1405  two component, sigma54 specific, transcriptional regulator, Fis family  34.48 
 
 
478 aa  68.6  0.00000000003  Geobacter sp. M21  Bacteria  n/a    hitchhiker  0.0000117702 
 
 
-
 
NC_011206  Lferr_0608  two component, sigma54 specific, transcriptional regulator, Fis family  41.56 
 
 
461 aa  68.6  0.00000000003  Acidithiobacillus ferrooxidans ATCC 53993  Bacteria  normal  normal 
 
 
-
 
NC_007005  Psyr_0722  helix-turn-helix, Fis-type  36.7 
 
 
445 aa  68.6  0.00000000003  Pseudomonas syringae pv. syringae B728a  Bacteria  normal  normal 
 
 
-
 
NC_009675  Anae109_1017  two component, sigma54 specific, Fis family transcriptional regulator  37.61 
 
 
460 aa  68.6  0.00000000003  Anaeromyxobacter sp. Fw109-5  Bacteria  normal  normal  0.0996419 
 
 
-
 
NC_009767  Rcas_0993  response regulator receiver protein  35.51 
 
 
127 aa  68.6  0.00000000003  Roseiflexus castenholzii DSM 13941  Bacteria  normal  0.250481  normal 
 
 
-
 
NC_007947  Mfla_0911  two component, sigma54 specific, Fis family transcriptional regulator  35.45 
 
 
456 aa  68.2  0.00000000003  Methylobacillus flagellatus KT  Bacteria  normal  normal 
 
 
-
 
NC_007947  Mfla_1055  two component, sigma54 specific, Fis family transcriptional regulator  35.45 
 
 
456 aa  68.2  0.00000000003  Methylobacillus flagellatus KT  Bacteria  normal  0.523432  normal 
 
 
-
 
NC_009943  Dole_1938  response regulator receiver protein  33.96 
 
 
244 aa  68.2  0.00000000003  Desulfococcus oleovorans Hxd3  Bacteria  normal  n/a   
 
 
-
 
NC_011146  Gbem_2805  two component, sigma54 specific, transcriptional regulator, Fis family  34.48 
 
 
478 aa  68.6  0.00000000003  Geobacter bemidjiensis Bem  Bacteria  normal  0.228775  n/a   
 
 
-
 
NC_008554  Sfum_1934  two component, sigma54 specific, Fis family transcriptional regulator  30.09 
 
 
476 aa  68.6  0.00000000003  Syntrophobacter fumaroxidans MPOB  Bacteria  normal  0.808753  normal  0.132653 
 
 
-
 
NC_011761  AFE_0447  sigma-54 dependent DNA-binding response regulator  41.56 
 
 
461 aa  68.6  0.00000000003  Acidithiobacillus ferrooxidans ATCC 23270  Bacteria  normal  n/a   
 
 
-
 
NC_008554  Sfum_3765  two component, sigma54 specific, Fis family transcriptional regulator  39.82 
 
 
463 aa  68.2  0.00000000003  Syntrophobacter fumaroxidans MPOB  Bacteria  decreased coverage  0.000821276  normal 
 
 
-
 
NC_009831  Ssed_0187  response regulator receiver protein  33.33 
 
 
120 aa  68.2  0.00000000003  Shewanella sediminis HAW-EB3  Bacteria  normal  normal 
 
 
-
 
NC_009943  Dole_1357  response regulator receiver protein  31.78 
 
 
144 aa  68.6  0.00000000003  Desulfococcus oleovorans Hxd3  Bacteria  normal  0.48275  n/a   
 
 
-
 
NC_011891  A2cp1_1183  two component, sigma54 specific, transcriptional regulator, Fis family  32.23 
 
 
481 aa  67.8  0.00000000004  Anaeromyxobacter dehalogenans 2CP-1  Bacteria  normal  n/a   
 
 
-
 
NC_009767  Rcas_3669  response regulator receiver protein  34.51 
 
 
127 aa  68.2  0.00000000004  Roseiflexus castenholzii DSM 13941  Bacteria  normal  normal 
 
 
-
 
NC_011145  AnaeK_1114  two component, sigma54 specific, transcriptional regulator, Fis family  32.23 
 
 
501 aa  67.8  0.00000000004  Anaeromyxobacter sp. K  Bacteria  normal  n/a   
 
 
-
 
NC_007517  Gmet_0776  two component, sigma54 specific, Fis family transcriptional regulator  32.14 
 
 
454 aa  68.2  0.00000000004  Geobacter metallireducens GS-15  Bacteria  normal  normal 
 
 
-
 
NC_007517  Gmet_2924  two component, sigma54 specific, Fis family transcriptional regulator  32.76 
 
 
470 aa  67.8  0.00000000004  Geobacter metallireducens GS-15  Bacteria  normal  0.777319  hitchhiker  0.0000000000564278 
 
 
-
 
NC_013552  DhcVS_1078  DNA-binding response regulator  31.36 
 
 
180 aa  68.2  0.00000000004  Dehalococcoides sp. VS  Bacteria  unclonable  0.00000000000063084  n/a   
 
 
-
 
NC_007760  Adeh_1055  two component, sigma54 specific, Fis family transcriptional regulator  32.23 
 
 
481 aa  68.2  0.00000000004  Anaeromyxobacter dehalogenans 2CP-C  Bacteria  normal  0.874499  n/a   
 
 
-
 
NC_013158  Huta_2409  multi-sensor signal transduction histidine kinase  35.92 
 
 
759 aa  68.2  0.00000000004  Halorhabdus utahensis DSM 12940  Archaea  normal  0.456195  n/a   
 
 
-
 
NC_009616  Tmel_0460  response regulator receiver protein  33.33 
 
 
119 aa  67.8  0.00000000004  Thermosipho melanesiensis BI429  Bacteria  normal  0.903697  n/a   
 
 
-
 
NC_009767  Rcas_0845  response regulator receiver modulated metal dependent phosphohydrolase  36.28 
 
 
508 aa  68.2  0.00000000004  Roseiflexus castenholzii DSM 13941  Bacteria  normal  0.903712  hitchhiker  0.00198769 
 
 
-
 
NC_008781  Pnap_1073  multi-sensor hybrid histidine kinase  35.09 
 
 
1158 aa  67.8  0.00000000004  Polaromonas naphthalenivorans CJ2  Bacteria  hitchhiker  0.00830683  normal  0.406928 
 
 
-
 
NC_011901  Tgr7_3262  nitrogen metabolism transcriptional regulator, NtrC, Fis Family  36.7 
 
 
471 aa  67.8  0.00000000005  Thioalkalivibrio sp. HL-EbGR7  Bacteria  normal  n/a   
 
 
-
 
NC_013385  Adeg_0644  two component transcriptional regulator, winged helix family  30.95 
 
 
236 aa  67.8  0.00000000005  Ammonifex degensii KC4  Bacteria  normal  n/a   
 
 
-
 
NC_009523  RoseRS_4041  response regulator receiver protein  34.51 
 
 
127 aa  67.8  0.00000000005  Roseiflexus sp. RS-1  Bacteria  normal  0.557093  normal 
 
 
-
 
NC_009483  Gura_2678  two component, sigma-54 specific, Fis family transcriptional regulator  32.08 
 
 
457 aa  67.8  0.00000000005  Geobacter uraniireducens Rf4  Bacteria  normal  n/a   
 
 
-
 
NC_009972  Haur_1267  response regulator receiver sensor signal transduction histidine kinase  33.01 
 
 
542 aa  67.8  0.00000000005  Herpetosiphon aurantiacus ATCC 23779  Bacteria  normal  n/a   
 
 
-
 
NC_008609  Ppro_1655  two component, sigma54 specific, Fis family transcriptional regulator  30.43 
 
 
462 aa  67.8  0.00000000005  Pelobacter propionicus DSM 2379  Bacteria  hitchhiker  0.000025661  n/a   
 
 
-
 
NC_008700  Sama_2952  sensory box histidine kinase/response regulator  32.79 
 
 
1763 aa  67.8  0.00000000005  Shewanella amazonensis SB2B  Bacteria  normal  0.684028  normal  0.230032 
 
 
-
 
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