Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dole_1938 |
Symbol | |
ID | 5694778 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Desulfococcus oleovorans Hxd3 |
Kingdom | Bacteria |
Replicon accession | NC_009943 |
Strand | + |
Start bp | 2341462 |
End bp | 2342196 |
Gene Length | 735 bp |
Protein Length | 244 aa |
Translation table | 11 |
GC content | 52% |
IMG OID | 641264536 |
Product | response regulator receiver protein |
Protein accession | YP_001529819 |
Protein GI | 158521949 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG2204] Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 30 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | TTGAAAAAAG TACTGATCGT AGACGATGAC GCGGTATCCC GGGGATTGCT GTCGCGGGTG ATGAAGCCCT ATGCCGCGGA TTTTGAAATC CTCACTGCCA AAGATGGGGC CGAGGCGGCG GACATGATGA CCCGGCAGAC CATTGACCTT ATCATCAGCG ACCTTCAGAT GCCGGTGATG GACGGCTTTC AGCTTCTCGA ATATATCGAT CAGAATTTTC CCGGCACACC GGTCTTCATG ATGACCGCCT TCAGTTCCAA AGAGACCGAA GAAAAGGCTT ACGCCCTGGG AGCCTTCAAA TTTTTCGAAA AACCCCTGAA CATGGATGTG CTCACTGACG CCATTTTTGA ACAGCTCAAC TCCGGCGCTG AAGGCGTCAT GACCGGTATC AGCCTTGCCT CTTTTCTTCA ACTCCTGGAG ATGGAGCGCA AAACCTGCAC CCTGAAAATC AGCACGCCAA ACAAATCCGG AACCATCTAT TTCCGCGAAG GGGCCATGAT CAACGCGGCC ACTGACCAGG TCAAGGGACT GCAGGCCGCC TTTGAGATGC TCTCATGGGA CCAGATCAAA ATAGAGGTCT CCGGTGTTTG TCGCAAGAAG GACCGGGTGA TCCGCCAGGC ACTGATGAAT ATCCTGATGG AAGGCCTGAA AATAAAAGAC GAAAAAGATC AGAAGTCACG GCTGCGGCCC CTCACCGATT TTTCTTCCCG GAAAAACGTC AGGACACTCA GGTAG
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Protein sequence | MKKVLIVDDD AVSRGLLSRV MKPYAADFEI LTAKDGAEAA DMMTRQTIDL IISDLQMPVM DGFQLLEYID QNFPGTPVFM MTAFSSKETE EKAYALGAFK FFEKPLNMDV LTDAIFEQLN SGAEGVMTGI SLASFLQLLE MERKTCTLKI STPNKSGTIY FREGAMINAA TDQVKGLQAA FEMLSWDQIK IEVSGVCRKK DRVIRQALMN ILMEGLKIKD EKDQKSRLRP LTDFSSRKNV RTLR
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