Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Lferr_0608 |
Symbol | |
ID | 6876570 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Acidithiobacillus ferrooxidans ATCC 53993 |
Kingdom | Bacteria |
Replicon accession | NC_011206 |
Strand | - |
Start bp | 565578 |
End bp | 566963 |
Gene Length | 1386 bp |
Protein Length | 461 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 642788491 |
Product | two component, sigma54 specific, transcriptional regulator, Fis family |
Protein accession | YP_002219069 |
Protein GI | 198282748 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG2204] Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 42 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCCCAGAC CAGCTCCCAT CATCCTGACC ATCGACGATG ATCCCGACTT TCTGCGCCTG CTCGGCCTCT GGCTGGAAAG TGAGGGATAC CACGTCCTGG CCAGCAGTGA TCCCGTGCAG GGCATGCAGA CGTTGCAGAC GGCCAGACCG GATCTGGTCA TCACCGATCT GCGCATGCCC GGCATGGATG GAATGGCCGT GCTGGAGACG GTGCAGGCCC TCGATCCCGA CCTCCCCGTT ATCCTCCTCA CCGCCCACGG CAGCATCCCC AACGCCGTGG CAGCCATGCG TGCCCAGGCT TTCGGATATC TGAGCAAACC CTTCAGCAAT GAAGAGCTCC AGGAGTTGAC CACCGCCGCC CTGGCGCAGC GCCACGCCGG GCAGGAAACC CGCAAGCTCC GGGCGGCGTT GCGGCAACAG GCCGGGCAGA GCATCCTCCA TCGTAGCCCC GCCATGGCGG CGCTGGTGGA TGAGCTGGCG TGCGTTGCCA ACTCGAAAGC CAGCGTTTTC CTTTCCGGAG AAAGCGGATC CGGCAAAGAA CGGGTCGCTC GTGCCATCCA CGACGCCAGC CCACGCCGTG ACGGCCCGTT CGTTGCGGTC AATTGCGGTG CCATCCCCGC CGGGCTGGCG GAGAGCGAAC TCTTCGGCCA TGTCAAGGGC GCCTTCACCG GCGCCACCCA GGATCACACC GGATTGATCC GCAGCGCCAG CGGCGGCACT CTGTTCCTCG ACGAAATCGC CGACCTGCCT CTCACTCTGC AGGTCAAATT GCTCCGCGTC CTTCAGGAAG GTTCCTTGCG CCCCGTCGGC GCCAAAACGG AAATTTCCGT CGACCTGCGG GTCATCAGTG CCACCCATCA GGACATTCAC GCCCTCACCG CCGACGGCAC CTTCCGCGAG GATCTTTACT ATCGCCTGCA TGTCATCCCG CTGCGGGTCC CCAGCCTGAG CGAAAGGGCG GAAGACATCC CGCTGCTGGC CCAGCACTTT CTGGACCGCG AGAGTCAGCG CATGAACCGG GATATCCTGG GTTTCAGTCC CGAGGCCCTC GACAAGCTGA TGCAACGATC CTGGCCCGGC AACGTCCGGG AATTGGAGAA TGCCGTCACC TTTGCCGCGG CCGTCACCGA AAAAGGCTGG GTCGCCGCCG ACGCCATCCC TGACAACGGC CGCCAGGGTG GCCAGAGCGC CTTTCCTCCC CTGCAGGACG CCAAGGCGGC CTTTGAGCGC GGCTACCTGG AAAACCTGCT ACGCGCGACG GATGGCAACA TCTCCCGTGC CGCACGCATT GCCGGCCGAC ACCGGACGGA TCTTTACAAG CTGATGCGTA AGCACAGTCT GGCTCCGCAA CTTTTCAAGA ATCCCGAGGA CCGGGATGAG GAATAG
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Protein sequence | MPRPAPIILT IDDDPDFLRL LGLWLESEGY HVLASSDPVQ GMQTLQTARP DLVITDLRMP GMDGMAVLET VQALDPDLPV ILLTAHGSIP NAVAAMRAQA FGYLSKPFSN EELQELTTAA LAQRHAGQET RKLRAALRQQ AGQSILHRSP AMAALVDELA CVANSKASVF LSGESGSGKE RVARAIHDAS PRRDGPFVAV NCGAIPAGLA ESELFGHVKG AFTGATQDHT GLIRSASGGT LFLDEIADLP LTLQVKLLRV LQEGSLRPVG AKTEISVDLR VISATHQDIH ALTADGTFRE DLYYRLHVIP LRVPSLSERA EDIPLLAQHF LDRESQRMNR DILGFSPEAL DKLMQRSWPG NVRELENAVT FAAAVTEKGW VAADAIPDNG RQGGQSAFPP LQDAKAAFER GYLENLLRAT DGNISRAARI AGRHRTDLYK LMRKHSLAPQ LFKNPEDRDE E
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