| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Hhal_0366 |
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| Symbol | |
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| ID | 4711360 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Halorhodospira halophila SL1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008789 |
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| Strand | + |
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| Start bp | 428444 |
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| End bp | 432244 |
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| Gene Length | 3801 bp |
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| Protein Length | 1266 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 639854829 |
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| Product | multi-sensor hybrid histidine kinase |
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| Protein accession | YP_001001962 |
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| Protein GI | 121997175 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG0642] Signal transduction histidine kinase
[COG0745] Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.926091 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGTCCGAGA GCGCGCCCCA CTCTGATCGC CGGGCCGACG AATGGCGCAT CCTGTTCGAC
CACCTCCCGG ACGCCACCCT GCTCATCGCG CCGGACACCG GTCGAGTGCT GGAAGGCAAC
CCGGCCGCCG CCGCGCACCT CGGCTATACT CCGGAGGCTC TGCGCGGGCT GACCATCGCC
GATTTCGAGG CCGCCGAAAC CCCGGCAGAG ATCGCCGCAC ATATCGAGAA GATCCAGCGC
GCCGGGCGCG ACGACTTCGA GAGCCAGCAC CGGCGCCGCG ATGGCACCCT GGTCGATGTC
CAGATCACGG TGTCACAGGT CGAATTCGCG GGACACCCCC GCCTGCTCGC CGTCTTCCGG
GATATCACCG AGCGCAAGGA AACCATCCGA GCCCTGCGGA CCAGCGAGCA ACGTTTCCTG
GATGTGGTCG ACGCGGCCGG GGAGTACATC TGGGAGATCG ATCGCGACGG CACCTACCAG
CTGGTGACCG CGCAGATCGA GCCCCTGCTG GGCCGCTCCA CGGCGGAGAT CATCGGTCGC
TCCCCGGTCG ATTTCATGCC GAGCGCCGAG GCCGAACGGA TCCAGACGAT GCTCTCGGAA
CGAGCCCAGA CCGGTGCGGC CTGGCAGGGG CTGGAGCATG AATCCGTGCG CCCCGACGGC
ACCCGAGTCT GGCAGCGCGT CAGCGGGCTA CCGATCTTCA ATGAGGCCGG CGAACTCATC
GGTTTCCGGG GCACCGGTCG GGATATCACC GCCGAGCGGC AGGCCCAGCA GAACGAAAAG
CGCCTCAATG AGCGGCTTCG CCTGGCCACC ACCGCGGCCC GCATCGGCGT CTGGGAACTC
GACCGGGCGA CGGACCGACT CGAGTGGGAT GCCGGATCGG CGCGGATCTT CGGGACGGAC
CCGGCTGCGT TCAACCACCG TCTTGCCAAC CTCCAGGCGA CCCTGTGGGA CGAGAACCGG
ACAATCGCCG AGGGGCTGAT CGAGCGCAGT CTCCACAGCG CGGAACCGTG CGAGGCCGAG
TTCCGAATCC GTCGCAAAAG CGACGGTGCG ATTCGCCACA TCCGGTCTGT CAGCCTCTCC
ATCCCCGATG AACACGGCCA GGTTCAGCGC CTGGTAGGGA TCAACGAGGA CATCACCGAC
CGGGTCCAGG CCCGCGAGCA ACTGGCCGCG CAGGAGGCGC GATTCCGCGG CCTCTTCGAA
CTCGCCCCAG TGGGGCTGGC CATGACCGAC TTCGAGACCG GCGCCTTCCT GGACTTCAAC
GACCAGGTCT CGGAGGCTGC CGGCTATACC CGGGAGGCCT TCGCACAGCT CACCTATTGG
GACGTTACCC CGCGCGAATA CGAGCCGAAG GAACGCGAAC ACCTGGAAGC GATGGCGCGC
ACCGGGTACT ACGGGCCGTA CGAGAAGGAG TTCATCCACC GAGACGGGCA CCGGTTCCCG
GTCCTGCTCA ATGGGTTCCG GATGACAGAC CCGCAGACCG GACGAGTGGT GGTCTGGTCG
GTCATCCAGG ACATCTCCGA GCGCAAAGCC GTGGAGCAGG CCCTGCACCA GGCCAAGGAG
GCTGCCGAGG CCAACAACCG CGCCAAGAGC GACTTCCTGG CCAACATGAG CCACGAGATC
CGTACCCCGA TGAACGCGGT CATCGGCCTG GGCCAACTCC TGATCGAGAC GGACCTCGAT
CCCGTTCAGC GCAATTACGC CGAGAAGATG CACAACGCAT CGCGGATGCT GCTGGGGATC
ATCAACGACA TCCTCGACTA CTCCAAGATC GAGGCCGACA GGCTGACCCT CGACCCCCAC
CCGTTCGACC TCCACGAGCT GATGGATCAG ATGGCTACCC TGTTCGGGGA CCAGGCCGGC
GAAAAGGGCC TGGAGCTGTT CCTGCGCGTC GAACCGACCA TCCCCTCAAG CCTCGAGGGC
GATGCCCTGC GCCTGAGCCA GGTGCTGAGT AATCTGCTCT CCAACGCCAT CAAGTTCACC
AAGCACGGCC AGGTTGGACT CAGCATCACG CAGCTCGGTC AGGATCCTGA AGGGGTGCGG
TTGCACTTCC AGGTGGAGGA TACCGGGATC GGTATCACCC CCGAGCAACA GCGCAATCTC
TTCCAGGCGT TCTCCCAGGC GGACACCTCG ACCACCCGCA ACTACGGAGG CACGGGCCTC
GGGCTGGTCA TCAGTCAGCG GCTGGTGGCG CACATGGGCG GCGAGCTTCG GCTAGAATCC
ACCCCCGGCG AAGGCACACG CTTTGCGTTC GAGCTCCACC TGCCCATCGC CGGGACGGGC
CCGTGGACAC TGGATGCGCC GAGCCTGCCC GGTGGCCACG TCCTGGTGGT CGACGACCAC
GATGTCGCGC GCCAGATCCT CCGCGAGTAT CTTGAGGCCT GGGGGTACAC CGTCACCGAG
GCGGACAGCG GCCCGGCGGG GATCGAGGCG GCGCTGGCCG CCGAGCGCAG CCGCCAGCCC
TTCGACCTGA TGCTGATCGA CGGCCACCTG CCCGGCGAAG CGGATGGCTG GGGCACGGCC
CGGCGCCTGC GCACCCTGCA TGAGCGCGGC GACCTACCCA CCACCAGGGG GCCGATGATC
CTGGTCAGCG CCTATCAGCT GGACGACCGG TCCGTAGGCG ATCCCTTCGA CGGTTGCTTG
CCCAAACCGG TGACAGCCTC GACGCTCTTC GATGTCGTCC AGAACACCTT CGTCGGCGCA
CCTGCCGCGA CACCGGTCAC CACGAGCGGG GCCATTCCGA ATCTCTCGGA TCGATCCCTG
CTGCTGGTGG AGGACAACGC CATCAACCAG GAGGTGGCCC AGCGCCTGCT AGAGCAGACC
GGGGCGCGGA TCACCCTGGC CAGCAATGGC GCCGAGGCCG TGGCGTGGAC GCGGGAGGCC
ACCTTCGATC TGATCCTGAT GGATCTGCAG ATGCCGGTGA TGGACGGCTA CGAGGCCACC
CGGGAGATCC GCCGCGAGCA CCCGAACCTG CCCATCCTGG CCCTGACGGC TGCGGTGCTG
GATAACGACC GCGCCGGGGC CCGGGACGCG GGCCTGGACG ACCACATCGG CAAGCCCATC
GACAGCCGGC TGCTGTACCA ACGGCTGGTC CACTGGCTCG GCGCCGAGGG CACGGCATCG
CCCTCCGTGA ACGGCCCGAC CCCGCCCGGC GCGGATGGCG AGGACGCCGC GCTGCCCGAG
CAGCTTTCGG GGATCGACCA GACAACCGGC CTGCGCCACC TGGAGGGGGA TCGCGCCTTC
TATCGGCGCC TGCTCCAGCG CTTTGCCAGC CAACTCGAGG GTGAGCTCGG CCAGCTGCCC
GCCGCCCTGG ATCGGGGGGA CCCGGAGACC GCCCGCCGGG TGGCGCACAC CCTGAAGGGC
ACGGCCGCCA CCGTAGGGGC CACCCGGCTC GCCGAGGCTG CGGCCGGCGT TGACCGCTGC
CTCAAGGCCG GAGAGAGCGT TTCCGATGAG CTGCACCGGG AGCTGCGTGC GGCCCTGGAC
GAAGTCTCCG CGGGCCTTGA GGTGCTGGCC GATGCGGCCA CCACCTCGGC GCCGCAACCG
CCGTTGGATG CGACGGCGGC CCGTGAGGCG CTAAACCGCC TGTACACGGC CCTGCGAGCG
AACGAACTCG TCGACGAGGC CCTGGTCGAT GCCGCGCTCC ACCACCTCCG TGCGCTCAGC
GACGAGGCGA CCGTGCGCCG AGTCCGGCAG CAGATCGACC AGTTCGACTA CGACGCCGCC
ACCGAGGTGC TGGCTCCCCA CGCCGCCCTC ACACCGGACA GCGCAGCGTC TGGGGAGTCT
CCCCCCGCAC GCGACCGATG A
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| Protein sequence | MSESAPHSDR RADEWRILFD HLPDATLLIA PDTGRVLEGN PAAAAHLGYT PEALRGLTIA
DFEAAETPAE IAAHIEKIQR AGRDDFESQH RRRDGTLVDV QITVSQVEFA GHPRLLAVFR
DITERKETIR ALRTSEQRFL DVVDAAGEYI WEIDRDGTYQ LVTAQIEPLL GRSTAEIIGR
SPVDFMPSAE AERIQTMLSE RAQTGAAWQG LEHESVRPDG TRVWQRVSGL PIFNEAGELI
GFRGTGRDIT AERQAQQNEK RLNERLRLAT TAARIGVWEL DRATDRLEWD AGSARIFGTD
PAAFNHRLAN LQATLWDENR TIAEGLIERS LHSAEPCEAE FRIRRKSDGA IRHIRSVSLS
IPDEHGQVQR LVGINEDITD RVQAREQLAA QEARFRGLFE LAPVGLAMTD FETGAFLDFN
DQVSEAAGYT REAFAQLTYW DVTPREYEPK EREHLEAMAR TGYYGPYEKE FIHRDGHRFP
VLLNGFRMTD PQTGRVVVWS VIQDISERKA VEQALHQAKE AAEANNRAKS DFLANMSHEI
RTPMNAVIGL GQLLIETDLD PVQRNYAEKM HNASRMLLGI INDILDYSKI EADRLTLDPH
PFDLHELMDQ MATLFGDQAG EKGLELFLRV EPTIPSSLEG DALRLSQVLS NLLSNAIKFT
KHGQVGLSIT QLGQDPEGVR LHFQVEDTGI GITPEQQRNL FQAFSQADTS TTRNYGGTGL
GLVISQRLVA HMGGELRLES TPGEGTRFAF ELHLPIAGTG PWTLDAPSLP GGHVLVVDDH
DVARQILREY LEAWGYTVTE ADSGPAGIEA ALAAERSRQP FDLMLIDGHL PGEADGWGTA
RRLRTLHERG DLPTTRGPMI LVSAYQLDDR SVGDPFDGCL PKPVTASTLF DVVQNTFVGA
PAATPVTTSG AIPNLSDRSL LLVEDNAINQ EVAQRLLEQT GARITLASNG AEAVAWTREA
TFDLILMDLQ MPVMDGYEAT REIRREHPNL PILALTAAVL DNDRAGARDA GLDDHIGKPI
DSRLLYQRLV HWLGAEGTAS PSVNGPTPPG ADGEDAALPE QLSGIDQTTG LRHLEGDRAF
YRRLLQRFAS QLEGELGQLP AALDRGDPET ARRVAHTLKG TAATVGATRL AEAAAGVDRC
LKAGESVSDE LHRELRAALD EVSAGLEVLA DAATTSAPQP PLDATAAREA LNRLYTALRA
NELVDEALVD AALHHLRALS DEATVRRVRQ QIDQFDYDAA TEVLAPHAAL TPDSAASGES
PPARDR
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