Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Slin_3042 |
Symbol | |
ID | 8726794 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Spirosoma linguale DSM 74 |
Kingdom | Bacteria |
Replicon accession | NC_013730 |
Strand | - |
Start bp | 3695674 |
End bp | 3697248 |
Gene Length | 1575 bp |
Protein Length | 524 aa |
Translation table | 11 |
GC content | 48% |
IMG OID | |
Product | response regulator receiver protein |
Protein accession | YP_003387852 |
Protein GI | 284037922 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 24 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 24 |
Fosmid unclonability p-value | 0.0742856 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCAAAATT ATTCGATACT CTGGGCCGAC GATGAAATTG ATCTCCTGAA ACCCCATATC CTTTTTCTGA AGAATAAAGG CTACGATGTT ACCTCCGTAA ACAGTGGGGC CGATGCGCTC GATCAGGTTG AGCAGACCAA CTACGATGTT GTTTTTCTGG ACGAAATGAT GCCAGGTATG ACAGGGCTGG AAACGCTCTC GCAGATCAAG CAGATACGTC CGAACCTGCC CGTCGTGATG ATTACCAAGA GCGAAGAAGA GCATATTATG GAAGAGGCTA TCGGCTCCAA AATTGCTGAT TACCTCATCA AACCGCTCAA CCCGAATCAG ATTCTGCTGT CTGTAAAAAA GATTCTGGAC AATAAGCGAC TGGTTACCGA GCGTACCAAC ATCGGCTATC AACAAGATTT TCGGAACATC TCCATGCAGT ATAACGACCG CATGGATTTT GAAGAATGGG TCGATGTGTA CAAGAAACTG ATCTATTGGG AACTCGAACT CGACAGCTCG CAGGATAAAA GCATGTCGGA GGTGATGAAC ATGCAGAAGA GTGAAGCCAA TTCCGAATTC TGCAAGTTTG TTATTGACAA CTACGAAGAC TGGCTGAACG ATCCTAAAAC CGAAAGCCCC ATTATGTCGC ATCAATTGAT GCGCAAGAAG GTTTTCCCCC TGGTTGAGTC AACGCCCGCA TCGTCTGGGT CGGCTCCCTT GTTTTTCATT CTGATCGATA ACCTGCGATA CGACCAGTGG AAAGTGATCC AGCCCTTGTT GGCCGACTAT TTCACCGTGG AAGAAGAGTC GTCGTATTAT TCGATCCTGC CAACCACCAC CGGCTTTGCC CGTAACGCCA TCTTCTCGGG CATGATGCCC AGCGATATGG AGAAGAAACA CCCTGATCTG TGGGTGAATG ACGATAGTGA AGACGAAGGG TTGAACAACC ACGAAGAAGA GTTCCTGCGT CGGCAGCTCG ACCAGAGCCG TCTGAACATA AAGATGTCGT ACCACAAGAT TCTGAATGTC AGCCAGGGTA AGTCGCTCGT GGATAACTTC AACAACCTTC TGCAGAATCA GTTAAACGTG GTTGTGTACA ATTTCGTCGA CATGTTATCT CATGCCCGTA CGGATATGGC CATGATCAAG GAGCTGGCTC CTGATGAATC GGCGTATCGG TCTATTACAC GGTCGTGGTT TCTGCACTCA CCGCTGCTGG AATTTGTCCA GAAAATTGCA TCGAAAGGTG GCCGGTTAAT TATCACGACC GACCACGGTA TGATTCGGGT ACAGAAGCCT GCTAAAATTG TTGGCTACCG CGAAACGAAT ACCAATTTGC GGTATAAACA GGGTAAAAAT CTTGGATTCG ATGACAATCA CCTGTTCGTA GGCCGCAAGC CGGAACGCTT GTTTCTGCCC AAGCCGCACG TGTCAACGGC TTATGTCTTT ACGCTGGAAG ATTATTTCTT TGCGTATCCC AACAATTACA ATTACTACGT GAATCACTAC CGAAACACCT TCCAGCATGG GGGGGTGTCG CTGGAAGAAA TGATTATTCC ATTTGCTTAC CTGAAAGCGA AGTAG
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Protein sequence | MQNYSILWAD DEIDLLKPHI LFLKNKGYDV TSVNSGADAL DQVEQTNYDV VFLDEMMPGM TGLETLSQIK QIRPNLPVVM ITKSEEEHIM EEAIGSKIAD YLIKPLNPNQ ILLSVKKILD NKRLVTERTN IGYQQDFRNI SMQYNDRMDF EEWVDVYKKL IYWELELDSS QDKSMSEVMN MQKSEANSEF CKFVIDNYED WLNDPKTESP IMSHQLMRKK VFPLVESTPA SSGSAPLFFI LIDNLRYDQW KVIQPLLADY FTVEEESSYY SILPTTTGFA RNAIFSGMMP SDMEKKHPDL WVNDDSEDEG LNNHEEEFLR RQLDQSRLNI KMSYHKILNV SQGKSLVDNF NNLLQNQLNV VVYNFVDMLS HARTDMAMIK ELAPDESAYR SITRSWFLHS PLLEFVQKIA SKGGRLIITT DHGMIRVQKP AKIVGYRETN TNLRYKQGKN LGFDDNHLFV GRKPERLFLP KPHVSTAYVF TLEDYFFAYP NNYNYYVNHY RNTFQHGGVS LEEMIIPFAY LKAK
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