| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Oter_0999 |
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| Symbol | |
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| ID | 6206308 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Opitutus terrae PB90-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010571 |
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| Strand | + |
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| Start bp | 1227575 |
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| End bp | 1229383 |
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| Gene Length | 1809 bp |
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| Protein Length | 602 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 641690622 |
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| Product | response regulator receiver modulated serine phosphatase |
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| Protein accession | YP_001817887 |
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| Protein GI | 182412821 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG2204] Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains
[COG2208] Serine phosphatase RsbU, regulator of sigma subunit |
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| TIGRFAM ID | [TIGR00377] anti-anti-sigma factor |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.118416 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 3 |
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| Fosmid unclonability p-value | 0.00369461 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGGCGAAAC TCACGGTGCT GGTGGTGGAT GACGAGGAGC TGATCCTGCA TGTGCTGCTG
CGCTTTTTTC GCCGGCGCGG CGACCGTTGC GACGTGGCGC CCGGCGGAGC GGAGGCGCTG
CGGCTGGTCG AGGCTCAACG CTACGACCTG GTCATCTCGG ACATCGCGAT GCCGGAGATG
AACGGCCTCG AGTTGATCCG CCGCGTGAAG GAGCGGCAGC CGGACGCCGT TTGCATCCTG
ATGTCCGGGC TTGGTACGCG CGGGGACATC ATCGAGGCGT TGAAGATCGG GGTGTTCGAT
TTCATCGACA AACCCATCCC GGATCTCGCG GCGTTGACGA TGGTGATCGA CCGGGCGGCG
GAGAGCGGCC GGCTGGTCCG CGAGCGCAAC GCGCTGCTGG AGAACCTGCG CGAACAAAAC
ACCAAGCTCG AATACAGCCT GCTGCGGCTG CACGAGGCGT TTGCCCAGCT GCACCAGCAG
GAGGCGGTGC TGGAGTCGGA CCTGCAGAAG GCGCAGCGCG TGCAACGCAC GTTTTTGCCG
GCGGGATTTC CGCGCGTGGC GAACTTCGAT TTCTTCGGCT ACTACGCACC GTGCGACCAG
TTGGGCGGCG ATTTCTTTGG TACGCTGGCG CTGGCGGATG GCCGGATGGC GCTTTACCTG
GTCGACGTCG CCGGTCACGG CGTGAGCGCG GCGATGATCA CGGTGACGTT TCGTGAGTTG
ATGCGCGCGG GCCATCGCTC GACGGGACAG GACGCGCTGT TTGGAGAACC GGCTCGCGTG
TTGCGCACCA TGAACGAGGC GCTGATCGCG GAGCATTTCG ATCCGCCGAT CTATGTTTCG
ATGATCTACG CCGTGATCGA TCCGGGTTCG GGGGAGGTGA ACGTGGCCGC CGCCGGTCAT
CCGCCGCCGA TTCTGGTGGC GCGCGGAGGC GCGGCCGGGG ATGTCGAAGT CGGCGGAACC
GTGCTCGGCA CACCGGCCGT GACCGACTAC CGGGCCAAGC GACTGCTGCT CGGGCCGGGC
GACGCGCTGC TGTTTTATTC GGACGGGCTT TCGGAAATGC GGAGCCCGCA GGGCCGCGAG
TTGTCCGCCG ACCAGCTGCG TGAGATCATG GCGCGGCAAC ACGCGCAGCC GGCGCGCACG
ATCGGCGCCG AGGTGGAGCG ACGGTTTCTG GAACACCTCG AGGGCGCGGC TTCAACGGAT
GACATCACGT TCCTGGTGGT CGCGCGCACC GCCGCAGCGG TCGAGCCGAC GGTGCGCCGG
CCGGACGAGA TCATTCCGGA CTCGGTAAAG ATCGTGATGC CCGAGAAGTT GCGGCGGGTG
TCCGGCGGCG CGCGGGGCCA GATCCACGCC GGTTTCCGCG GGCGAACCTG CATCGTGCAG
TTCCGCGGTT TGACCACCTG GCAACTGGCG CCCGCGTTGC GGGAAATGCT CCAAGCGGCG
AAGGCCCGGG CCGAGCCACC GGTGTGCATC GATCTCGATG GCTGTGAGGC GCTGGATTCG
ACGATGCTCG GACTGCTCCT GCAGCAAAGC GCCGATCTCA TGCTGCACCA ACCGAATCCG
CGGGTGCTGG GCCAGCTCCA CGAGATGGGC GTGCTGCACT TGTTTAAAAT CAGTCACGAC
CCGTGTCCGC AGCCGCAGGT CGCGATGGCG ATCACGCCCG CTGAATCCAA GCAGGCGTGC
TCCGACCTGA TCCTGTCGGC GCACGAGGCG TTGATGGAGG CCTCGGCGAG AAACCGGGAG
AAGTTCAGGG ACGTCGTCGA ATCGTTACGT CAGGAAAACG CCGCCGCGGT GCATGCGCCG
CCGAAGTAA
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| Protein sequence | MAKLTVLVVD DEELILHVLL RFFRRRGDRC DVAPGGAEAL RLVEAQRYDL VISDIAMPEM
NGLELIRRVK ERQPDAVCIL MSGLGTRGDI IEALKIGVFD FIDKPIPDLA ALTMVIDRAA
ESGRLVRERN ALLENLREQN TKLEYSLLRL HEAFAQLHQQ EAVLESDLQK AQRVQRTFLP
AGFPRVANFD FFGYYAPCDQ LGGDFFGTLA LADGRMALYL VDVAGHGVSA AMITVTFREL
MRAGHRSTGQ DALFGEPARV LRTMNEALIA EHFDPPIYVS MIYAVIDPGS GEVNVAAAGH
PPPILVARGG AAGDVEVGGT VLGTPAVTDY RAKRLLLGPG DALLFYSDGL SEMRSPQGRE
LSADQLREIM ARQHAQPART IGAEVERRFL EHLEGAASTD DITFLVVART AAAVEPTVRR
PDEIIPDSVK IVMPEKLRRV SGGARGQIHA GFRGRTCIVQ FRGLTTWQLA PALREMLQAA
KARAEPPVCI DLDGCEALDS TMLGLLLQQS ADLMLHQPNP RVLGQLHEMG VLHLFKISHD
PCPQPQVAMA ITPAESKQAC SDLILSAHEA LMEASARNRE KFRDVVESLR QENAAAVHAP
PK
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