Gene Rcas_0993 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRcas_0993 
Symbol 
ID5538459 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRoseiflexus castenholzii DSM 13941 
KingdomBacteria 
Replicon accessionNC_009767 
Strand
Start bp1295421 
End bp1295804 
Gene Length384 bp 
Protein Length127 aa 
Translation table11 
GC content56% 
IMG OID640893136 
Productresponse regulator receiver protein 
Protein accessionYP_001431119 
Protein GI156740990 
COG category[T] Signal transduction mechanisms 
COG ID[COG2204] Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.250481 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones35 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATGGCGC AACACACCAT TCTCATTGTC GATGATGAAG CCAATCAGCG ACTCATGCTC 
ACTCAGGCGT TGCGCACCAA CGATGAGCGC GAGATTGCTT CGGCTGCGTC AGTAGCGGAG
GCGCTGGAAT GGCTCAATCA CCATACTGCT GATCTGATCA TCACCGATTA TAATATGCCG
TCGGCAAACG GGCTGGCGCT GGTTGCGCAT GTGCGCCAGC GCGCTCTTCC CACTCGCATC
ATTCTTATTA CGGCATACTA TTCGCCGGAG TTACAGGAAG CAGCCCGGCA ACTGGGGGTC
GATCACTTTT TGACCAAGCC GGTTCCGCTC TCACTGCTGC GGCGGCTTGC AAACGATCTA
GGAGATGTGA CTTCCAGCGC CTGA
 
Protein sequence
MMAQHTILIV DDEANQRLML TQALRTNDER EIASAASVAE ALEWLNHHTA DLIITDYNMP 
SANGLALVAH VRQRALPTRI ILITAYYSPE LQEAARQLGV DHFLTKPVPL SLLRRLANDL
GDVTSSA