| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ppha_0700 |
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| Symbol | |
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| ID | 6461511 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pelodictyon phaeoclathratiforme BU-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011060 |
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| Strand | + |
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| Start bp | 724585 |
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| End bp | 728844 |
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| Gene Length | 4260 bp |
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| Protein Length | 1419 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 642726957 |
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| Product | multi-sensor hybrid histidine kinase |
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| Protein accession | YP_002017612 |
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| Protein GI | 194335818 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG0642] Signal transduction histidine kinase
[COG2204] Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box |
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Plasmid Coverage information |
| Num covering plasmid clones | 3 |
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| Plasmid unclonability p-value | 0.81616 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGATATGA TGGTGGAACA CGTGCGAGAA CAGGAAGAGG AATATCTGCA GATGAAGGCT
TTGCTGGAGG AAAAAGATGC GAAGCTGGCT GAATATGAAA AACAGGTTGA AACGCTGGGG
CTGGTCATTG CCGGTACCAA TGCTGGTTCC TGGGACTGGG ATATCAGTTC GGGAGCAGTT
GCCATAAACA ACCGCTGGGC GGAAATCGCA GGTTATACGA AAGAGGAACT CGAACCGGTC
ACGATTGAAA CATGGATGAA GTTTTGTGAC CCTGACGATC TGAAGCGCTC AACACTCTTG
CTCGAGAGGC ATTTCAGCGG GGAGTCTGAT TTCTATGAAA TCGAACTCAG AATGCGGCAT
AAGAATGGTG ATTGGGTATG GGTGCTCGAC AGGGGTATTG TTTTCGAGCG TGACCGGACG
GGAAATCCGG TTCGAATGGT AGGTACCCAT CAGGATATAA CCAAGAGAAA GCATGCCGAG
GAAAGGCTTC TCAAGGAACG AAATATGTTC ATGGGGGGGC CGGTTTCGGT ATTTCGCCTG
AAAAACAGTC CCGGTTGGCC TATAGTCGAT GTAACGAAGA ATTTTGGAAT ATTGCCTGGT
TACCTGCCAG CCGAGTTGAT TGGCAATGTT GTCGGCTACA CAGAGCTTAT TCATCCGGAC
GACAGAACAC GGGTTTTGGG GGAAGTTGAA GCGTTCGCCG CAGACAACAG CCGGGAATCG
TTCGAGATGG AGTATCGGCT GCAGGGGAAA GATGGTTCCG AAATCGAGGT CTATGATTTC
AGGTTCATCC ATCGCGATGA AAACGGTGCG GTCTCCCATT ACGACTCATT TATCCTTGAT
GCGGCTTCTC ATGGTGGCAT TGAGCCATCC CTCTCATACA ATCGAAGGTT CGAGCGTCTC
GTTGCCACCC TGGCCAACCA GTTTATCAAC CTTCCTGCCC ACAGGATCGA CGAGATGGTC
AATCTTGCCC TCGAAAATAT CGGAAAGTTC GTACAGGCAG ACCGGAGTTA TATCTTTGAG
TACTACGACA ACCATCGCTT GATGGACAAT ACCCATGAGT GGTGCGCCGA GGGTATCGAG
CCGCAGATCC AGATCCTGCA GCATCTGCCA ACCGATCTGT TTGCATGGCT GACTGAAAAG
ATCAACATGA ATGAGGCAAT TATCGTACCG AGAGTATCGG AGCTGCCGGA GGAAGCTGCG
GCGGAAATGG AGATCCTCGA ACAGCAGGAT ATCCGATCGC TCATCATCAT TCCCCTCGCG
TCCGGTAATC TTCCGTTTGG CTATATCGGT TTCGATGCGG TTACCCAAGA GCGCCACTGG
CCACAGGAAA CCGTTTCGGT GCTTAAGCTC GCTGGAGGAA TCATCGCCAA CGCCCTTCAG
AGGAAGCAAG CTGAACGCAT GATCCAGTGT GAACTCGATC TTGCCCTGAA ATTGAGCGCA
TCGGCCTCAT TCGAGGAGAC TTTGAAAATT TGTCTGCAGA GTGCGCTTGA AATTTCAGGC
ATGGATTGTG GAGGGATCTA CCTCGTAAAC GAAGCCGATA AAAGCCTGAG TCTTGTCTAT
TCTGAAGGGC TTTCGGAATC GTTTGTCAGT AAAACAAATC ATTACAGCGG AGATTGCACC
CAGCAGCACA TCGTCTTCCA GGGTATACCA CTCTACAGTC GTTATACGGA AATCGAACTC
ACTACCGATC TACCAAGTCT GGATGACGAT CTGAAAGCAA TCGCGGTTGT TCCAGTCATG
AGCAAGAATG TTGTTGTAGC ATGTCTGAAT GTTGCATCCC ATTCGCTTAA CCAGGTACCG
GAATTTTCAC GCAAGGCGCT TGAGACTGTG GCTTCCCGGA TTGGCGCAGC TATTATTCAG
GCAAAACATG AGGAAAAGAT CAACGCAGCG AACAGGAACC TGGATGCACT ATTCAACACG
ATCGACGACA TGCTTTTCAT CGTCGGAGCT GATGAGATGG TCAAACACAC GAACTCTGCC
GTGCTCTCCC GCCTCGGCTA TACACAGGAA GAGGCATATC GAATGCATGT GCTTGACTTT
CATCCTCCGG CACAGCGGGA AGAGGCCAGA AGAAATATCG AAGGAATGCT TGCCGGCACT
GAACATGTCT GTCTTGTTCC CCTTATGACG AAAACAGCTT CCCTGATCCC TGTGGAAACG
ATTGCGACCC ATGGGAGCTG GGACGACCAA CCTGTGATTT TCGGCATTTC GAGGGATATT
ACTGAGCGCA TAAAACATGA ATCGACCGTC AAGGAAAGTG AAAGAAGGTT CAGAGAGCTC
ATAGAATTTC TTCCTCTTCC GGCTATTGAG GCTGACCTGG ATGGCGTGAT CACCTACTGC
AACAGGCAAG GGTTGCTCTT TTTCGGATAT GATGCGGGGG AAATGCAGAA CAATTCGGTA
TACACCCTGG TTAACCCCTC TGATTTGAGC TATTTGAAAA GTGTGCTGCA CGCCATCACC
CTTGAAGGTA AAAGGGTAAG TGTCGAGATG ACCGGGCTCA GGAAGGATGG AACTGAATTT
CAGGCGATGC TTTACGGTGC ACCGGTGTTC ACAGGAGGTG TGATCACTGG CGGGCGAGGG
GTTGTTGTAG ACCTTACGGA AATGAAAAAA AACGAGGCGG CGCTTGCGGC ATATACCCTG
CAGTCGAGGT TGCGTGAAGA GTTAAGCTCC ATTATCGATA ATATTCCTGG TGTCGTTTAC
CGACTCTCCG GTGACGGGAG CATCAAGTAT TTCAGCGGTT CGATCCATTC TGTTGCAAAC
GGACTTTTCC CTCAAATGAA TGGAAAGAAT TATGAAGCAA TGAGCCCCAT TCATCCCGAT
GACCGCGAAA AAGTTGAGCA GTCCAACAGA GAGCTCATGA GTAAAAAAAA TTCCCTGATC
ATCGTCTATC GGGTCATGGA TGAAAATGGT TCAGTCAAGT GGATCGAAGA CCGGAAAACC
TCGACCTTTT CCGAAGAGGG CCAGTTTTCT TTTATTGACG GCATCCTTTT TGACATTACC
GAGCGGGTCA ATGCACTGAA CAGTCAGAAT GAATTTGAAA GCCGCATGCG CAAGACCCAG
CGGCTTGAAA CCATAGGAAC ACTGGCCGGA GGTATCGCAC ACGATTTCAA CAATATTCTC
ACCCCCATCA TGGGCTATGC TGAAATGGGA TTGCTTACCC TTTCGGGTGA TGCTCCTCAG
CATGACTATT TTTCCGAAAT TGTCAACGCG GCAGACCGTG CCCAGAACCT CGTTTCACAG
ATTCTCACCT TCAGCAGGGC CCAGGAAAGT ACCCCTTCGG TTGTTTCTGT CCAGTCCATA
CTTCAGGAAG CGCTGAAATT GCTGCGTCCC TCCATCCCTG CAACGATCAG CATCAGCCAG
AACATTGAGA GGGAGTGCAG GAACATTCTT GCCGATCCCT CCAAAATCCA CCAGGTTGTC
GTTAACCTCT GTACCAACGC ATTCCAGGCA ATGGAGGGAA ATGGCGGGGA TCTGAGTATC
GAGCTTAAGG AGATCACTCT TGAGGGTGAA TTGGGGAAAG AACTGCCAAA AATCGGGCCG
GGGCGGTTTG TGAACCTGAC CGTTTCCGAT ACCGGCTGTG GTATGGATGA TGCAACCATG
GAACGTATTT TCGAGCCTTT TTTTACGACG AAATCGGTTA ACAAGGGTAC CGGGCTCGGA
CTTTCGGTGG TTCATGGCAT CATCAAGAGC TTTGGAGGCG AAATAACTGT TCAAAGCCGG
AAGGGGAATG GAAGCTCATT CAGCATTTTC CTGCCGGTTA TCGAAGAACA GCAAAAAAAA
TGTGAGCGTG AAGAAATCCC GATTCAGGGC TCTTGCCAAC TGCTCTTCAT AGACGATGAA
GTGAGCACCC TGAAAATGAT GTCAGCCTTG CTCACGCAAC TTGGGTTCAG GGTAAAGGTT
TTCAGTTCTC CCCTTAAGGC TCTTGAAGTT TTCCGCCAAG AGCCCGCTGC GTTCGACCTT
GTCATAACCG ATCTCACGAT GCCGGAGATG AACGGTATCG AGCTCGTCTC GGCATTGCAT
GAAATACGGG AGGATCTGCC GGTTATCCTT ATGACCGGTT ATGGCAAGGA GATCGAAAAC
AATGCCTCTC TGGCCCGCTA CGGTATCAGC AGACTTCTGA AAAAACCGGT CAAAATAGCC
CAGCTTAGCA GGGAGATCAA TGAGGTCATT TCAGCTCATT ACAAGGAACC CGTTCGGAAT
GAAAAAACTG CAGAAAGAGG TGGAAAAGCA GCGCCGCAGG ATTACGATAG TTATTTGTAA
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| Protein sequence | MDMMVEHVRE QEEEYLQMKA LLEEKDAKLA EYEKQVETLG LVIAGTNAGS WDWDISSGAV
AINNRWAEIA GYTKEELEPV TIETWMKFCD PDDLKRSTLL LERHFSGESD FYEIELRMRH
KNGDWVWVLD RGIVFERDRT GNPVRMVGTH QDITKRKHAE ERLLKERNMF MGGPVSVFRL
KNSPGWPIVD VTKNFGILPG YLPAELIGNV VGYTELIHPD DRTRVLGEVE AFAADNSRES
FEMEYRLQGK DGSEIEVYDF RFIHRDENGA VSHYDSFILD AASHGGIEPS LSYNRRFERL
VATLANQFIN LPAHRIDEMV NLALENIGKF VQADRSYIFE YYDNHRLMDN THEWCAEGIE
PQIQILQHLP TDLFAWLTEK INMNEAIIVP RVSELPEEAA AEMEILEQQD IRSLIIIPLA
SGNLPFGYIG FDAVTQERHW PQETVSVLKL AGGIIANALQ RKQAERMIQC ELDLALKLSA
SASFEETLKI CLQSALEISG MDCGGIYLVN EADKSLSLVY SEGLSESFVS KTNHYSGDCT
QQHIVFQGIP LYSRYTEIEL TTDLPSLDDD LKAIAVVPVM SKNVVVACLN VASHSLNQVP
EFSRKALETV ASRIGAAIIQ AKHEEKINAA NRNLDALFNT IDDMLFIVGA DEMVKHTNSA
VLSRLGYTQE EAYRMHVLDF HPPAQREEAR RNIEGMLAGT EHVCLVPLMT KTASLIPVET
IATHGSWDDQ PVIFGISRDI TERIKHESTV KESERRFREL IEFLPLPAIE ADLDGVITYC
NRQGLLFFGY DAGEMQNNSV YTLVNPSDLS YLKSVLHAIT LEGKRVSVEM TGLRKDGTEF
QAMLYGAPVF TGGVITGGRG VVVDLTEMKK NEAALAAYTL QSRLREELSS IIDNIPGVVY
RLSGDGSIKY FSGSIHSVAN GLFPQMNGKN YEAMSPIHPD DREKVEQSNR ELMSKKNSLI
IVYRVMDENG SVKWIEDRKT STFSEEGQFS FIDGILFDIT ERVNALNSQN EFESRMRKTQ
RLETIGTLAG GIAHDFNNIL TPIMGYAEMG LLTLSGDAPQ HDYFSEIVNA ADRAQNLVSQ
ILTFSRAQES TPSVVSVQSI LQEALKLLRP SIPATISISQ NIERECRNIL ADPSKIHQVV
VNLCTNAFQA MEGNGGDLSI ELKEITLEGE LGKELPKIGP GRFVNLTVSD TGCGMDDATM
ERIFEPFFTT KSVNKGTGLG LSVVHGIIKS FGGEITVQSR KGNGSSFSIF LPVIEEQQKK
CEREEIPIQG SCQLLFIDDE VSTLKMMSAL LTQLGFRVKV FSSPLKALEV FRQEPAAFDL
VITDLTMPEM NGIELVSALH EIREDLPVIL MTGYGKEIEN NASLARYGIS RLLKKPVKIA
QLSREINEVI SAHYKEPVRN EKTAERGGKA APQDYDSYL
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