Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ppha_0700 |
Symbol | |
ID | 6461511 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pelodictyon phaeoclathratiforme BU-1 |
Kingdom | Bacteria |
Replicon accession | NC_011060 |
Strand | + |
Start bp | 724585 |
End bp | 728844 |
Gene Length | 4260 bp |
Protein Length | 1419 aa |
Translation table | 11 |
GC content | 50% |
IMG OID | 642726957 |
Product | multi-sensor hybrid histidine kinase |
Protein accession | YP_002017612 |
Protein GI | 194335818 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG0642] Signal transduction histidine kinase [COG2204] Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains |
TIGRFAM ID | [TIGR00229] PAS domain S-box |
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Plasmid Coverage information |
Num covering plasmid clones | 3 |
Plasmid unclonability p-value | 0.81616 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGATATGA TGGTGGAACA CGTGCGAGAA CAGGAAGAGG AATATCTGCA GATGAAGGCT TTGCTGGAGG AAAAAGATGC GAAGCTGGCT GAATATGAAA AACAGGTTGA AACGCTGGGG CTGGTCATTG CCGGTACCAA TGCTGGTTCC TGGGACTGGG ATATCAGTTC GGGAGCAGTT GCCATAAACA ACCGCTGGGC GGAAATCGCA GGTTATACGA AAGAGGAACT CGAACCGGTC ACGATTGAAA CATGGATGAA GTTTTGTGAC CCTGACGATC TGAAGCGCTC AACACTCTTG CTCGAGAGGC ATTTCAGCGG GGAGTCTGAT TTCTATGAAA TCGAACTCAG AATGCGGCAT AAGAATGGTG ATTGGGTATG GGTGCTCGAC AGGGGTATTG TTTTCGAGCG TGACCGGACG GGAAATCCGG TTCGAATGGT AGGTACCCAT CAGGATATAA CCAAGAGAAA GCATGCCGAG GAAAGGCTTC TCAAGGAACG AAATATGTTC ATGGGGGGGC CGGTTTCGGT ATTTCGCCTG AAAAACAGTC CCGGTTGGCC TATAGTCGAT GTAACGAAGA ATTTTGGAAT ATTGCCTGGT TACCTGCCAG CCGAGTTGAT TGGCAATGTT GTCGGCTACA CAGAGCTTAT TCATCCGGAC GACAGAACAC GGGTTTTGGG GGAAGTTGAA GCGTTCGCCG CAGACAACAG CCGGGAATCG TTCGAGATGG AGTATCGGCT GCAGGGGAAA GATGGTTCCG AAATCGAGGT CTATGATTTC AGGTTCATCC ATCGCGATGA AAACGGTGCG GTCTCCCATT ACGACTCATT TATCCTTGAT GCGGCTTCTC ATGGTGGCAT TGAGCCATCC CTCTCATACA ATCGAAGGTT CGAGCGTCTC GTTGCCACCC TGGCCAACCA GTTTATCAAC CTTCCTGCCC ACAGGATCGA CGAGATGGTC AATCTTGCCC TCGAAAATAT CGGAAAGTTC GTACAGGCAG ACCGGAGTTA TATCTTTGAG TACTACGACA ACCATCGCTT GATGGACAAT ACCCATGAGT GGTGCGCCGA GGGTATCGAG CCGCAGATCC AGATCCTGCA GCATCTGCCA ACCGATCTGT TTGCATGGCT GACTGAAAAG ATCAACATGA ATGAGGCAAT TATCGTACCG AGAGTATCGG AGCTGCCGGA GGAAGCTGCG GCGGAAATGG AGATCCTCGA ACAGCAGGAT ATCCGATCGC TCATCATCAT TCCCCTCGCG TCCGGTAATC TTCCGTTTGG CTATATCGGT TTCGATGCGG TTACCCAAGA GCGCCACTGG CCACAGGAAA CCGTTTCGGT GCTTAAGCTC GCTGGAGGAA TCATCGCCAA CGCCCTTCAG AGGAAGCAAG CTGAACGCAT GATCCAGTGT GAACTCGATC TTGCCCTGAA ATTGAGCGCA TCGGCCTCAT TCGAGGAGAC TTTGAAAATT TGTCTGCAGA GTGCGCTTGA AATTTCAGGC ATGGATTGTG GAGGGATCTA CCTCGTAAAC GAAGCCGATA AAAGCCTGAG TCTTGTCTAT TCTGAAGGGC TTTCGGAATC GTTTGTCAGT AAAACAAATC ATTACAGCGG AGATTGCACC CAGCAGCACA TCGTCTTCCA GGGTATACCA CTCTACAGTC GTTATACGGA AATCGAACTC ACTACCGATC TACCAAGTCT GGATGACGAT CTGAAAGCAA TCGCGGTTGT TCCAGTCATG AGCAAGAATG TTGTTGTAGC ATGTCTGAAT GTTGCATCCC ATTCGCTTAA CCAGGTACCG GAATTTTCAC GCAAGGCGCT TGAGACTGTG GCTTCCCGGA TTGGCGCAGC TATTATTCAG GCAAAACATG AGGAAAAGAT CAACGCAGCG AACAGGAACC TGGATGCACT ATTCAACACG ATCGACGACA TGCTTTTCAT CGTCGGAGCT GATGAGATGG TCAAACACAC GAACTCTGCC GTGCTCTCCC GCCTCGGCTA TACACAGGAA GAGGCATATC GAATGCATGT GCTTGACTTT CATCCTCCGG CACAGCGGGA AGAGGCCAGA AGAAATATCG AAGGAATGCT TGCCGGCACT GAACATGTCT GTCTTGTTCC CCTTATGACG AAAACAGCTT CCCTGATCCC TGTGGAAACG ATTGCGACCC ATGGGAGCTG GGACGACCAA CCTGTGATTT TCGGCATTTC GAGGGATATT ACTGAGCGCA TAAAACATGA ATCGACCGTC AAGGAAAGTG AAAGAAGGTT CAGAGAGCTC ATAGAATTTC TTCCTCTTCC GGCTATTGAG GCTGACCTGG ATGGCGTGAT CACCTACTGC AACAGGCAAG GGTTGCTCTT TTTCGGATAT GATGCGGGGG AAATGCAGAA CAATTCGGTA TACACCCTGG TTAACCCCTC TGATTTGAGC TATTTGAAAA GTGTGCTGCA CGCCATCACC CTTGAAGGTA AAAGGGTAAG TGTCGAGATG ACCGGGCTCA GGAAGGATGG AACTGAATTT CAGGCGATGC TTTACGGTGC ACCGGTGTTC ACAGGAGGTG TGATCACTGG CGGGCGAGGG GTTGTTGTAG ACCTTACGGA AATGAAAAAA AACGAGGCGG CGCTTGCGGC ATATACCCTG CAGTCGAGGT TGCGTGAAGA GTTAAGCTCC ATTATCGATA ATATTCCTGG TGTCGTTTAC CGACTCTCCG GTGACGGGAG CATCAAGTAT TTCAGCGGTT CGATCCATTC TGTTGCAAAC GGACTTTTCC CTCAAATGAA TGGAAAGAAT TATGAAGCAA TGAGCCCCAT TCATCCCGAT GACCGCGAAA AAGTTGAGCA GTCCAACAGA GAGCTCATGA GTAAAAAAAA TTCCCTGATC ATCGTCTATC GGGTCATGGA TGAAAATGGT TCAGTCAAGT GGATCGAAGA CCGGAAAACC TCGACCTTTT CCGAAGAGGG CCAGTTTTCT TTTATTGACG GCATCCTTTT TGACATTACC GAGCGGGTCA ATGCACTGAA CAGTCAGAAT GAATTTGAAA GCCGCATGCG CAAGACCCAG CGGCTTGAAA CCATAGGAAC ACTGGCCGGA GGTATCGCAC ACGATTTCAA CAATATTCTC ACCCCCATCA TGGGCTATGC TGAAATGGGA TTGCTTACCC TTTCGGGTGA TGCTCCTCAG CATGACTATT TTTCCGAAAT TGTCAACGCG GCAGACCGTG CCCAGAACCT CGTTTCACAG ATTCTCACCT TCAGCAGGGC CCAGGAAAGT ACCCCTTCGG TTGTTTCTGT CCAGTCCATA CTTCAGGAAG CGCTGAAATT GCTGCGTCCC TCCATCCCTG CAACGATCAG CATCAGCCAG AACATTGAGA GGGAGTGCAG GAACATTCTT GCCGATCCCT CCAAAATCCA CCAGGTTGTC GTTAACCTCT GTACCAACGC ATTCCAGGCA ATGGAGGGAA ATGGCGGGGA TCTGAGTATC GAGCTTAAGG AGATCACTCT TGAGGGTGAA TTGGGGAAAG AACTGCCAAA AATCGGGCCG GGGCGGTTTG TGAACCTGAC CGTTTCCGAT ACCGGCTGTG GTATGGATGA TGCAACCATG GAACGTATTT TCGAGCCTTT TTTTACGACG AAATCGGTTA ACAAGGGTAC CGGGCTCGGA CTTTCGGTGG TTCATGGCAT CATCAAGAGC TTTGGAGGCG AAATAACTGT TCAAAGCCGG AAGGGGAATG GAAGCTCATT CAGCATTTTC CTGCCGGTTA TCGAAGAACA GCAAAAAAAA TGTGAGCGTG AAGAAATCCC GATTCAGGGC TCTTGCCAAC TGCTCTTCAT AGACGATGAA GTGAGCACCC TGAAAATGAT GTCAGCCTTG CTCACGCAAC TTGGGTTCAG GGTAAAGGTT TTCAGTTCTC CCCTTAAGGC TCTTGAAGTT TTCCGCCAAG AGCCCGCTGC GTTCGACCTT GTCATAACCG ATCTCACGAT GCCGGAGATG AACGGTATCG AGCTCGTCTC GGCATTGCAT GAAATACGGG AGGATCTGCC GGTTATCCTT ATGACCGGTT ATGGCAAGGA GATCGAAAAC AATGCCTCTC TGGCCCGCTA CGGTATCAGC AGACTTCTGA AAAAACCGGT CAAAATAGCC CAGCTTAGCA GGGAGATCAA TGAGGTCATT TCAGCTCATT ACAAGGAACC CGTTCGGAAT GAAAAAACTG CAGAAAGAGG TGGAAAAGCA GCGCCGCAGG ATTACGATAG TTATTTGTAA
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Protein sequence | MDMMVEHVRE QEEEYLQMKA LLEEKDAKLA EYEKQVETLG LVIAGTNAGS WDWDISSGAV AINNRWAEIA GYTKEELEPV TIETWMKFCD PDDLKRSTLL LERHFSGESD FYEIELRMRH KNGDWVWVLD RGIVFERDRT GNPVRMVGTH QDITKRKHAE ERLLKERNMF MGGPVSVFRL KNSPGWPIVD VTKNFGILPG YLPAELIGNV VGYTELIHPD DRTRVLGEVE AFAADNSRES FEMEYRLQGK DGSEIEVYDF RFIHRDENGA VSHYDSFILD AASHGGIEPS LSYNRRFERL VATLANQFIN LPAHRIDEMV NLALENIGKF VQADRSYIFE YYDNHRLMDN THEWCAEGIE PQIQILQHLP TDLFAWLTEK INMNEAIIVP RVSELPEEAA AEMEILEQQD IRSLIIIPLA SGNLPFGYIG FDAVTQERHW PQETVSVLKL AGGIIANALQ RKQAERMIQC ELDLALKLSA SASFEETLKI CLQSALEISG MDCGGIYLVN EADKSLSLVY SEGLSESFVS KTNHYSGDCT QQHIVFQGIP LYSRYTEIEL TTDLPSLDDD LKAIAVVPVM SKNVVVACLN VASHSLNQVP EFSRKALETV ASRIGAAIIQ AKHEEKINAA NRNLDALFNT IDDMLFIVGA DEMVKHTNSA VLSRLGYTQE EAYRMHVLDF HPPAQREEAR RNIEGMLAGT EHVCLVPLMT KTASLIPVET IATHGSWDDQ PVIFGISRDI TERIKHESTV KESERRFREL IEFLPLPAIE ADLDGVITYC NRQGLLFFGY DAGEMQNNSV YTLVNPSDLS YLKSVLHAIT LEGKRVSVEM TGLRKDGTEF QAMLYGAPVF TGGVITGGRG VVVDLTEMKK NEAALAAYTL QSRLREELSS IIDNIPGVVY RLSGDGSIKY FSGSIHSVAN GLFPQMNGKN YEAMSPIHPD DREKVEQSNR ELMSKKNSLI IVYRVMDENG SVKWIEDRKT STFSEEGQFS FIDGILFDIT ERVNALNSQN EFESRMRKTQ RLETIGTLAG GIAHDFNNIL TPIMGYAEMG LLTLSGDAPQ HDYFSEIVNA ADRAQNLVSQ ILTFSRAQES TPSVVSVQSI LQEALKLLRP SIPATISISQ NIERECRNIL ADPSKIHQVV VNLCTNAFQA MEGNGGDLSI ELKEITLEGE LGKELPKIGP GRFVNLTVSD TGCGMDDATM ERIFEPFFTT KSVNKGTGLG LSVVHGIIKS FGGEITVQSR KGNGSSFSIF LPVIEEQQKK CEREEIPIQG SCQLLFIDDE VSTLKMMSAL LTQLGFRVKV FSSPLKALEV FRQEPAAFDL VITDLTMPEM NGIELVSALH EIREDLPVIL MTGYGKEIEN NASLARYGIS RLLKKPVKIA QLSREINEVI SAHYKEPVRN EKTAERGGKA APQDYDSYL
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