| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | DvMF_1096 |
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| Symbol | |
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| ID | 7172997 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfovibrio vulgaris str. 'Miyazaki F' |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011769 |
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| Strand | + |
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| Start bp | 1337733 |
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| End bp | 1342379 |
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| Gene Length | 4647 bp |
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| Protein Length | 1548 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 643539607 |
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| Product | multi-sensor hybrid histidine kinase |
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| Protein accession | YP_002435518 |
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| Protein GI | 218886197 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG0642] Signal transduction histidine kinase |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 65 |
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| Fosmid unclonability p-value | 0.363033 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCCACCC CCCCGGGCCC CATGCTGTTC CGCCATCTTT CCGTCTTCCA GCGGCTGCTC
ATCTGCACGC TGCTCATCGT CGCCTTCAGC ATCGTCCTCG GGTACAGCAC CCTGAGCCTG
ATGCGCGACA TGGCCGAAGA CGCCAACACC GTCTACCGGC ACACCTTCAT CGCCACCAGC
AGTCTGCAGC AGGCCAAGGA AAGCGTGGAG CGCATGCGCG CGGCCATGCG CGAGCAGATC
ATCGAGGTGG ACGAGGCCAT CAAGGCCGAG CAGGTGGCCA CCCTGCGGCG AGAGGAACGC
CTGTTCCACG ACTGCGTGGA AGCCGTGCGC GCCAATTTCC GGGGCGAGCC GGCCCTCATA
GACGCCTTGG CAAGCCACTA CGACGACTTC CTGTCCATGC GTGACCGGGC CATGACCATG
TCCGAAAACC GCGAAATACA GGAAGCCTGG CGGCTTACCG AATCCTCGCC CCAGAACCCG
GCGGACCGTC TGCTGCACGC CATCGACGAC CTGATGCACG CGGCCCGCGC CACGGCAGAA
CATTTCTTCC AGTCCTCGGT GGCGGAAAAC CGGACCACAC AGCTCAAGGC CATTGCGGCG
TCCGGACTGT TCTGCGCCAT GGTCGTGGCC ATCACCTATC TTGTCAGCTG GAGCATCCGG
CGGCGCCTGC TGGCCCTGAC CGGCTGCGTC AAGGCCCTGG CCGACGGCGA CCTCGACGTG
CAGATCCCCT ACGGCGAGGA ACGCAACGAA ATGGGGGCCA TGGCCCGCTC GCTGCAAGTG
CTGCTGGGCG TTTCGCGCCA GATGGAACAG CAGCGCTGGA TCAAGGCCCA GATGTCCGAG
ACGGCCACCA CGCTGCAACA GGCGGGCGAC CTGGATTCCT TCGGCCAGCG ACTGTCCGCC
GTGGCCGCAC AGGTATCCGG CGCCCCCTAC GCGGCGCTGT ACGTGCCCAA CGACGACGGC
GTGCATCTCG ATCTGGTGGC CTCGCTGGGC GGCATCGTCG GCGGCCCACC CGCCAGCATA
CCCAAGGGCG GCGGGCTGGT GGGTCGTTGC GCCGCCACGC GCGCACCGGT GGAGCTCACG
CCGCCGGAAG GGGAAACCCT GCGCTTCGCC ACCGGGCTGG GCGACGTGCA CCCCGCTTCG
TTGCGGGCCT ATCCGCTGCT GCTGGGCGAA CGGTTGCTGG GCGTGCTGGA ACTGGCCACC
CTGGGGCCGC TGCCCCCGCG CGCCGCCACC CTGTTCGAGG ACATGCTGCC CATGGCCGCC
CTGTCGCAGG AAGTGCTGGA GCGCAACCTG CACACCCGCA GCCTGCTGGA CCAGACCCGC
AGGCAGGCAA CGGAACTGGA GGAAAGCCGC GAACTGCTGC GCCGCAGCGA GGCCTTCTTC
CGCGCCGTGT TCGAAACGGC GGGCATCGGC ATCGTCAGCG AGCGCAGGGG CCTTGGCATC
GACCGGGCCA ATCCCGCCTT CAGCGACTTC ATCGGCATCA GTGAACCGGA ACTGCGCGGG
CGCGACCTTG AGGATTTCTT TCACCCCGAC GACCGCGAGG CGCTGGAAGC CCTGCTGAGC
CGCCTGGACC CCGACAAGCT GGAATACGCC GTCCCGCGGC ACGGAAACCC GGAACGTGAC
GGGCTGGACG CCGGCGAGCC GGACCAGGCC CGCTCCACCA TCACGGTGCG GGCAGAGCAC
CGCTACCTGC GCCCCGACGG CGAGGTGCGC TGGGCCGACG TGCGTTGTGC GCTCATCGGA
GACAGGGACA TCACCCCCCG CCGGGTCACC CTGATCAACG ACATCACCGA ACTCAAGGAG
CAGCAGGCGG AACTGAAGGA TACCGAGGCC TGGTACCGGG GCATCGTGCA TTCGGCCCCG
GACGCCATGG TGGTGGTGGA CGGAGAAGGG CGCATCGTGC TGTGCAACCC GCAGCTTGAA
CGGCTGCTGG GTTATGAGAT GGGCGAACTT ACCGGACATC TGGTCGAACA GTTCCTGCCC
GAAGAAGTGC GTGAACGCCA CGTGAAGCTG CGCAACGACT TCCTGGCCTC GCCGCTACAG
GTCATCGGGC ATGAGCGCGA GGTGATTGGC GTGCGCAAGG ACGGCACCCG CCTGCCGCTG
GAAATCAGCC TCAGCAAGCT GCCCCCGTCC GACCGGCACC CCATGAGCGC CTGCGGCGCC
CTGCGCGACA TATCCCTGCG CAAGCGATCC GAGGCCGAAC TGCGCCGGGC CAAGGAAATG
GCCGAAGAAG CCACCCGGCT CAAAAGCGAC TTCCTGGCCA ACATGAGCCA CGAAATCCGC
ACCCCCATGA ACGCCATAAT CGGCATGGCC CACCTGGCCC TGAAGACGGA GCTGGACCCG
CGCCAGGCCG ACTACGTGCG CAAGATACGC GCCTCGGGCC AGCACCTGCT GGGCATCCTC
AACGACATCC TCGACTTCTC CAAGATCGAG GCGGGCAAGC TGACGGTGGA GAACACCGAG
TTCGAACTGG AAACCGTGCT CGACACCGTG GCCAACCTGG TTTCGGAAAA GGCCGCCACC
AAGGGGCTGG AATTCGTGCT CGATGTGGCC GCCAACGTGC CCCCCGTGCT GCGGGGCGAC
CCGTTGCGCC TGGGGCAGAT TCTCATCAAC TACGCCAACA ACGCGGTGAA GTTCACCGAG
CACGGCGAAA TCGTAATTCA TGTGGAAACG CTGGAAACGG GCGATACCGA CGTGCTGCTG
CGCTTTGCCG TGCGCGACAC GGGCATCGGA CTCACCGACG AGCAGAAGGC CCGGCTGTTC
GTCTCGTTCC AGCAGGCGGA CACGTCCACC ACCCGCAAGT ACGGCGGCAC CGGCCTTGGC
CTTGCCATCG CCAAGAAGCT GGCGGACCTG ATGGGCGGCG GCGTGGGCGT GGACAGCGTC
CCCGGCGGGG GCAGCACCTT CTGGTTCACG GCCCGGCTGG GCCTGGGCTC CGGACGGCGG
GCCCTGCTGC CGCGCATCGA CCTGCGCGGT TTGCGGGTGC TGGTGGTGGA CGACAACCCC
CAGGCCCGCA TGGTGCTGGC CCACATGCTG GAAGGCATGA CCTTCCGCCC GGTCATGGCG
GACGGCGGCG AGACCGCGCT GGACCTGCTG CGCGAAGCCC GGGACGCGGA CACCCCCTTC
GGCATGGTCT TCCTGGACTG GCAGATGCCC GGCATGGACG GGCTGGAGAC TGCCCGCAAC
ATCCGCACCC TGGCGCCGGA CCTGCCCGTG GCCATCGTCA CCGCTCACGG GCGCGAAGAG
ATTTTCGCCG CGTCCGAGGG AGTGGGAGTG TCCGCCGTGC TGGTGAAGCC GGTGCAGCCG
TCCCTGCTGT TCGACACGGC CATGCGTCTG CTGGGCGCGG TGCACCCGGC TCCGCGCGCC
GCCGTGCCCC CGCCGGATAC CCGCCCCGCC ATGCTCGACG GCGTGCGCGG CTCGCGCGTG
CTGCTGGTGG AGGACAACGA ACTGAACCGC GAGGTGGCCC TGGGGCTGCT GGCCGAGGCC
GGGCTTGTGC CCGATGCGGC GGAAGACGGG GCGCAGGCGG TGCGCATGGT CATGGAGGGT
GACTACGACC TCGTGCTGAT GGACGTGCAG ATGCCCGTCA TGGACGGATA CGAGGCCACC
CGCATCATCC GCCGCAGCCG GGAAGCCGAC AGCCTACCCA TAGTGGCCAT GACCGCCAAC
GCCATGCGGA GCGACCGCGA GGCGTGCCTG GCGGCGGGCA TGAACGACCA CGTGGCCAAA
CCCATCGATC CGGACGAACT GTTCGCGGCC CTGATCCGCT GGCTGCCCCG ACGGGGCGAG
GCGGAGCGGC AGCAGGATGC CGCAGACACC ACAGCCCCCG GCACACAGCC CGCCACGCAG
GCGGACACGT TGTCCGGCGC ATCCCCCGAC ACGTCGCCTG CCTCCGGTCC TGTCAGACAA
CACGGACAAA ACGGGCAGGG CAGGCAAAAC GGGCAGAACG ACGCCAGGCA CGTCCTCGAC
CCGGAAGCGG GACTGCGCCG GGTGCTGGGC AAGCAGGCCA CCTACCACAC ATTATTGCGG
CGCTTCGTTT CCCAGCACGC CGACGCGGCC ACGCGCATCG CCGGGTTCAT CCAGTCCGGC
GACGGAGCGG GGGCCACGCG CGAGGCGCAC ACCCTGAAAG GCGTGGCGGG CACCCTGGGC
GCCCGCGCGG TACAGTCCCA GGCCGCCGAC CTGGAAGCGG CACTGCGCCA CGCGGCCTCG
CAAGAGCACA CGACAGAGGT GCTGGCACTG CTGCGCATAT CGCTGGACGA GGCGGTGCGG
GCCATGCACC GCCTGCTGGA CGCCACACGG CCCGACCCGA ATGGCGCCGC ACCGGGCACC
GTGCCGGATG CCCCCGTTCG ACGCGATGCC GGATCAGGTG ACGCAGCAGG CGACGGGCAC
GAAGCCGGAC AAGACACCGG ACCGGAAAGG AACCTGGCAG ACAGCGATCT GTCCCGCGCA
CTGCCCGAAG GGCTTCTCGA CCAGTTGGAA ACGCTCATCG AGGAAGACGA CAGCGAGGCC
GTCGACCTCT TCAACACCCA CTCGGAAGCC CTGCGCGCCG CTCTGGGGCA GCCTCTGGTA
ACCGGCATGG GCGAGGCGTT GCGCGCCTTC GAATTCGAAA CCGCCCTGGA GATGCTGCGC
TCGGCCCGCC CACCGCACGA CGGCTGA
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| Protein sequence | MPTPPGPMLF RHLSVFQRLL ICTLLIVAFS IVLGYSTLSL MRDMAEDANT VYRHTFIATS
SLQQAKESVE RMRAAMREQI IEVDEAIKAE QVATLRREER LFHDCVEAVR ANFRGEPALI
DALASHYDDF LSMRDRAMTM SENREIQEAW RLTESSPQNP ADRLLHAIDD LMHAARATAE
HFFQSSVAEN RTTQLKAIAA SGLFCAMVVA ITYLVSWSIR RRLLALTGCV KALADGDLDV
QIPYGEERNE MGAMARSLQV LLGVSRQMEQ QRWIKAQMSE TATTLQQAGD LDSFGQRLSA
VAAQVSGAPY AALYVPNDDG VHLDLVASLG GIVGGPPASI PKGGGLVGRC AATRAPVELT
PPEGETLRFA TGLGDVHPAS LRAYPLLLGE RLLGVLELAT LGPLPPRAAT LFEDMLPMAA
LSQEVLERNL HTRSLLDQTR RQATELEESR ELLRRSEAFF RAVFETAGIG IVSERRGLGI
DRANPAFSDF IGISEPELRG RDLEDFFHPD DREALEALLS RLDPDKLEYA VPRHGNPERD
GLDAGEPDQA RSTITVRAEH RYLRPDGEVR WADVRCALIG DRDITPRRVT LINDITELKE
QQAELKDTEA WYRGIVHSAP DAMVVVDGEG RIVLCNPQLE RLLGYEMGEL TGHLVEQFLP
EEVRERHVKL RNDFLASPLQ VIGHEREVIG VRKDGTRLPL EISLSKLPPS DRHPMSACGA
LRDISLRKRS EAELRRAKEM AEEATRLKSD FLANMSHEIR TPMNAIIGMA HLALKTELDP
RQADYVRKIR ASGQHLLGIL NDILDFSKIE AGKLTVENTE FELETVLDTV ANLVSEKAAT
KGLEFVLDVA ANVPPVLRGD PLRLGQILIN YANNAVKFTE HGEIVIHVET LETGDTDVLL
RFAVRDTGIG LTDEQKARLF VSFQQADTST TRKYGGTGLG LAIAKKLADL MGGGVGVDSV
PGGGSTFWFT ARLGLGSGRR ALLPRIDLRG LRVLVVDDNP QARMVLAHML EGMTFRPVMA
DGGETALDLL REARDADTPF GMVFLDWQMP GMDGLETARN IRTLAPDLPV AIVTAHGREE
IFAASEGVGV SAVLVKPVQP SLLFDTAMRL LGAVHPAPRA AVPPPDTRPA MLDGVRGSRV
LLVEDNELNR EVALGLLAEA GLVPDAAEDG AQAVRMVMEG DYDLVLMDVQ MPVMDGYEAT
RIIRRSREAD SLPIVAMTAN AMRSDREACL AAGMNDHVAK PIDPDELFAA LIRWLPRRGE
AERQQDAADT TAPGTQPATQ ADTLSGASPD TSPASGPVRQ HGQNGQGRQN GQNDARHVLD
PEAGLRRVLG KQATYHTLLR RFVSQHADAA TRIAGFIQSG DGAGATREAH TLKGVAGTLG
ARAVQSQAAD LEAALRHAAS QEHTTEVLAL LRISLDEAVR AMHRLLDATR PDPNGAAPGT
VPDAPVRRDA GSGDAAGDGH EAGQDTGPER NLADSDLSRA LPEGLLDQLE TLIEEDDSEA
VDLFNTHSEA LRAALGQPLV TGMGEALRAF EFETALEMLR SARPPHDG
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