More than 300 homologs were found in PanDaTox collection
for query gene Gura_1326 on replicon NC_009483
Organism: Geobacter uraniireducens Rf4



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_009483  Gura_1326  response regulator receiver protein  100 
 
 
122 aa  247  3e-65  Geobacter uraniireducens Rf4  Bacteria  hitchhiker  0.00000300613  n/a   
 
 
-
 
NC_007517  Gmet_1220  response regulator receiver domain-containing protein  43.93 
 
 
143 aa  87.8  5e-17  Geobacter metallireducens GS-15  Bacteria  normal  hitchhiker  0.000878383 
 
 
-
 
NC_002939  GSU1417  response regulator  40.74 
 
 
141 aa  84.7  4e-16  Geobacter sulfurreducens PCA  Bacteria  normal  n/a   
 
 
-
 
NC_002939  GSU2693  response regulator  39.29 
 
 
128 aa  84.7  4e-16  Geobacter sulfurreducens PCA  Bacteria  normal  n/a   
 
 
-
 
NC_007512  Plut_0891  response regulator receiver domain-containing protein  33.61 
 
 
137 aa  77.4  0.00000000000005  Chlorobium luteolum DSM 273  Bacteria  normal  normal 
 
 
-
 
NC_009675  Anae109_1530  response regulator receiver protein  37.61 
 
 
127 aa  76.3  0.0000000000001  Anaeromyxobacter sp. Fw109-5  Bacteria  normal  0.754323  normal 
 
 
-
 
NC_011989  Avi_3746  chemotaxis response regulator  38.61 
 
 
121 aa  75.5  0.0000000000002  Agrobacterium vitis S4  Bacteria  normal  0.193057  n/a   
 
 
-
 
NC_009455  DehaBAV1_1106  response regulator receiver protein  33.94 
 
 
180 aa  75.5  0.0000000000003  Dehalococcoides sp. BAV1  Bacteria  normal  0.0674112  n/a   
 
 
-
 
NC_009972  Haur_1267  response regulator receiver sensor signal transduction histidine kinase  40.2 
 
 
542 aa  75.1  0.0000000000003  Herpetosiphon aurantiacus ATCC 23779  Bacteria  normal  n/a   
 
 
-
 
NC_009523  RoseRS_0338  response regulator receiver modulated metal dependent phosphohydrolase  39.25 
 
 
513 aa  74.7  0.0000000000004  Roseiflexus sp. RS-1  Bacteria  normal  normal  0.102838 
 
 
-
 
NC_009636  Smed_2719  response regulator receiver protein  37.86 
 
 
120 aa  74.7  0.0000000000004  Sinorhizobium medicae WSM419  Bacteria  normal  0.0959171  normal 
 
 
-
 
NC_011369  Rleg2_3325  response regulator receiver protein  38.61 
 
 
120 aa  74.3  0.0000000000005  Rhizobium leguminosarum bv. trifolii WSM2304  Bacteria  normal  normal  0.745241 
 
 
-
 
NC_012850  Rleg_3624  response regulator receiver protein  38.61 
 
 
120 aa  74.3  0.0000000000005  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  normal 
 
 
-
 
NC_013552  DhcVS_1078  DNA-binding response regulator  32.46 
 
 
180 aa  73.9  0.0000000000007  Dehalococcoides sp. VS  Bacteria  unclonable  0.00000000000063084  n/a   
 
 
-
 
NC_007796  Mhun_0315  response regulator receiver domain-containing protein  38.83 
 
 
122 aa  73.9  0.0000000000007  Methanospirillum hungatei JF-1  Archaea  normal  0.48267  normal  0.327834 
 
 
-
 
NC_013889  TK90_0988  two component, sigma54 specific, transcriptional regulator, Fis family  36.79 
 
 
468 aa  73.6  0.0000000000008  Thioalkalivibrio sp. K90mix  Bacteria  normal  normal 
 
 
-
 
NC_009720  Xaut_2816  response regulator receiver protein  39.6 
 
 
120 aa  73.6  0.0000000000009  Xanthobacter autotrophicus Py2  Bacteria  normal  0.101903  normal  0.104606 
 
 
-
 
NC_004311  BRA0043  response regulator  39.6 
 
 
120 aa  73.2  0.000000000001  Brucella suis 1330  Bacteria  normal  0.868286  n/a   
 
 
-
 
NC_009504  BOV_A0040  response regulator  39.6 
 
 
120 aa  73.2  0.000000000001  Brucella ovis ATCC 25840  Bacteria  normal  n/a   
 
 
-
 
NC_007406  Nwi_2946  response regulator receiver  37.04 
 
 
135 aa  73.2  0.000000000001  Nitrobacter winogradskyi Nb-255  Bacteria  normal  normal 
 
 
-
 
NC_007509  Bcep18194_C7223  response regulator receiver modulated metal dependent phosphohydrolase  37.25 
 
 
473 aa  73.2  0.000000000001  Burkholderia sp. 383  Bacteria  normal  0.58817  normal  0.218696 
 
 
-
 
NC_007517  Gmet_2924  two component, sigma54 specific, Fis family transcriptional regulator  33.64 
 
 
470 aa  73.2  0.000000000001  Geobacter metallireducens GS-15  Bacteria  normal  0.777319  hitchhiker  0.0000000000564278 
 
 
-
 
NC_007519  Dde_0324  response regulator receiver domain-containing protein  39 
 
 
127 aa  73.2  0.000000000001  Desulfovibrio desulfuricans subsp. desulfuricans str. G20  Bacteria  normal  0.581793  n/a   
 
 
-
 
NC_013501  Rmar_2408  PAS/PAC sensor hybrid histidine kinase  39.29 
 
 
647 aa  72.8  0.000000000001  Rhodothermus marinus DSM 4252  Bacteria  normal  0.385618  n/a   
 
 
-
 
NC_007964  Nham_1143  response regulator receiver domain-containing protein  37.04 
 
 
119 aa  73.2  0.000000000001  Nitrobacter hamburgensis X14  Bacteria  normal  n/a   
 
 
-
 
NC_009668  Oant_4284  response regulator receiver protein  39.6 
 
 
130 aa  73.2  0.000000000001  Ochrobactrum anthropi ATCC 49188  Bacteria  normal  n/a   
 
 
-
 
NC_010511  M446_5217  response regulator receiver protein  36.45 
 
 
118 aa  72.8  0.000000000002  Methylobacterium sp. 4-46  Bacteria  normal  0.0686971  normal  0.0287673 
 
 
-
 
NC_011891  A2cp1_1620  response regulator receiver protein  37.96 
 
 
127 aa  72.4  0.000000000002  Anaeromyxobacter dehalogenans 2CP-1  Bacteria  normal  0.0904485  n/a   
 
 
-
 
NC_011894  Mnod_5952  response regulator receiver protein  36.45 
 
 
118 aa  72.8  0.000000000002  Methylobacterium nodulans ORS 2060  Bacteria  normal  0.0493294  n/a   
 
 
-
 
NC_010814  Glov_2786  two component, sigma54 specific, transcriptional regulator, Fis family  37.62 
 
 
480 aa  72.8  0.000000000002  Geobacter lovleyi SZ  Bacteria  normal  0.543097  n/a   
 
 
-
 
NC_007760  Adeh_2344  response regulator receiver domain-containing protein  37.96 
 
 
135 aa  72.4  0.000000000002  Anaeromyxobacter dehalogenans 2CP-C  Bacteria  normal  n/a   
 
 
-
 
NC_007778  RPB_4515  response regulator receiver domain-containing protein  37.04 
 
 
119 aa  72.8  0.000000000002  Rhodopseudomonas palustris HaA2  Bacteria  normal  0.403365  normal  0.643653 
 
 
-
 
NC_007925  RPC_0781  response regulator receiver domain-containing protein  37.04 
 
 
119 aa  72.4  0.000000000002  Rhodopseudomonas palustris BisB18  Bacteria  normal  normal  0.394955 
 
 
-
 
NC_011145  AnaeK_1525  response regulator receiver protein  37.96 
 
 
127 aa  72.4  0.000000000002  Anaeromyxobacter sp. K  Bacteria  normal  n/a   
 
 
-
 
NC_007958  RPD_4356  response regulator receiver  37.04 
 
 
119 aa  72.8  0.000000000002  Rhodopseudomonas palustris BisB5  Bacteria  hitchhiker  0.00220083  normal 
 
 
-
 
NC_009485  BBta_1391  putative response regulator receiver (CheY-like protein)  37.04 
 
 
119 aa  72.4  0.000000000002  Bradyrhizobium sp. BTAi1  Bacteria  hitchhiker  0.00446889  normal  0.206531 
 
 
-
 
NC_010172  Mext_3276  response regulator receiver  37.62 
 
 
118 aa  71.6  0.000000000003  Methylobacterium extorquens PA1  Bacteria  normal  normal 
 
 
-
 
NC_011004  Rpal_0976  response regulator receiver protein  37.04 
 
 
119 aa  71.6  0.000000000003  Rhodopseudomonas palustris TIE-1  Bacteria  normal  0.351318  n/a   
 
 
-
 
NC_010725  Mpop_3474  response regulator receiver protein  37.62 
 
 
118 aa  71.6  0.000000000003  Methylobacterium populi BJ001  Bacteria  normal  normal  0.790484 
 
 
-
 
NC_011757  Mchl_3600  response regulator receiver protein  37.62 
 
 
118 aa  71.6  0.000000000003  Methylobacterium chloromethanicum CM4  Bacteria  normal  0.11211  normal 
 
 
-
 
NC_009943  Dole_2331  response regulator receiver protein  36 
 
 
142 aa  71.6  0.000000000003  Desulfococcus oleovorans Hxd3  Bacteria  hitchhiker  0.00000000425244  n/a   
 
 
-
 
NC_010505  Mrad2831_0043  response regulator receiver protein  37.62 
 
 
118 aa  71.6  0.000000000003  Methylobacterium radiotolerans JCM 2831  Bacteria  normal  0.0842812  normal 
 
 
-
 
NC_011666  Msil_1234  response regulator receiver protein  37.86 
 
 
138 aa  72  0.000000000003  Methylocella silvestris BL2  Bacteria  n/a    normal  0.0344647 
 
 
-
 
NC_002936  DET1294  DNA-binding response regulator  32.11 
 
 
180 aa  71.2  0.000000000004  Dehalococcoides ethenogenes 195  Bacteria  unclonable  0.00000125664  n/a   
 
 
-
 
NC_008639  Cpha266_0165  multi-sensor hybrid histidine kinase  41.24 
 
 
826 aa  71.2  0.000000000004  Chlorobium phaeobacteroides DSM 266  Bacteria  normal  n/a   
 
 
-
 
NC_013173  Dbac_2666  two component, sigma54 specific, transcriptional regulator, Fis family  38.61 
 
 
459 aa  71.2  0.000000000004  Desulfomicrobium baculatum DSM 4028  Bacteria  normal  n/a   
 
 
-
 
NC_008751  Dvul_1117  two component, sigma54 specific, Fis family transcriptional regulator  34.51 
 
 
462 aa  70.9  0.000000000005  Desulfovibrio vulgaris DP4  Bacteria  normal  0.144471  normal  0.173796 
 
 
-
 
NC_011901  Tgr7_1854  response regulator receiver protein  36.75 
 
 
445 aa  70.9  0.000000000005  Thioalkalivibrio sp. HL-EbGR7  Bacteria  normal  0.654411  n/a   
 
 
-
 
NC_011830  Dhaf_4841  response regulator receiver protein  30.77 
 
 
118 aa  70.9  0.000000000006  Desulfitobacterium hafniense DCB-2  Bacteria  normal  0.202718  n/a   
 
 
-
 
NC_008254  Meso_2750  response regulator receiver protein  36.45 
 
 
120 aa  70.9  0.000000000006  Chelativorans sp. BNC1  Bacteria  hitchhiker  0.000684047  n/a   
 
 
-
 
NC_008783  BARBAKC583_0612  response regulator  37.38 
 
 
120 aa  70.1  0.000000000008  Bartonella bacilliformis KC583  Bacteria  normal  0.124392  n/a   
 
 
-
 
NC_007519  Dde_2355  two component Fis family transcriptional regulator  35.14 
 
 
465 aa  70.5  0.000000000008  Desulfovibrio desulfuricans subsp. desulfuricans str. G20  Bacteria  normal  0.658958  n/a   
 
 
-
 
NC_009784  VIBHAR_06169  histidine kinase  33.88 
 
 
1225 aa  70.5  0.000000000008  Vibrio harveyi ATCC BAA-1116  Bacteria  n/a    n/a   
 
 
-
 
NC_009675  Anae109_0614  putative GAF sensor protein  35.65 
 
 
622 aa  70.1  0.000000000009  Anaeromyxobacter sp. Fw109-5  Bacteria  decreased coverage  0.00376401  normal 
 
 
-
 
NC_009675  Anae109_4152  two component, sigma54 specific, Fis family transcriptional regulator  37.61 
 
 
480 aa  69.7  0.00000000001  Anaeromyxobacter sp. Fw109-5  Bacteria  normal  normal  0.038607 
 
 
-
 
NC_008789  Hhal_0366  multi-sensor hybrid histidine kinase  37.14 
 
 
1266 aa  70.1  0.00000000001  Halorhodospira halophila SL1  Bacteria  normal  0.926091  n/a   
 
 
-
 
NC_007908  Rfer_2738  response regulator receiver domain-containing protein  37.62 
 
 
194 aa  70.1  0.00000000001  Rhodoferax ferrireducens T118  Bacteria  hitchhiker  0.000186206  n/a   
 
 
-
 
NC_009511  Swit_3860  integral membrane sensor hybrid histidine kinase  40.59 
 
 
520 aa  69.7  0.00000000001  Sphingomonas wittichii RW1  Bacteria  normal  normal 
 
 
-
 
NC_011769  DvMF_2748  two component, sigma54 specific, transcriptional regulator, Fis family  35.19 
 
 
542 aa  70.1  0.00000000001  Desulfovibrio vulgaris str. 'Miyazaki F'  Bacteria  n/a    normal 
 
 
-
 
NC_002939  GSU0837  response regulator  35.24 
 
 
136 aa  68.9  0.00000000002  Geobacter sulfurreducens PCA  Bacteria  normal  0.0958978  n/a   
 
 
-
 
NC_011769  DvMF_2109  two component, sigma54 specific, transcriptional regulator, Fis family  38.53 
 
 
515 aa  69.3  0.00000000002  Desulfovibrio vulgaris str. 'Miyazaki F'  Bacteria  n/a    normal 
 
 
-
 
NC_007512  Plut_2011  PAS/PAC sensor hybrid histidine kinase  36.19 
 
 
814 aa  68.9  0.00000000002  Chlorobium luteolum DSM 273  Bacteria  normal  normal  0.866808 
 
 
-
 
NC_009972  Haur_0852  GAF sensor hybrid histidine kinase  34.65 
 
 
1055 aa  69.3  0.00000000002  Herpetosiphon aurantiacus ATCC 23779  Bacteria  normal  n/a   
 
 
-
 
NC_007912  Sde_0519  putative CheA signal transduction histidine kinases  32.17 
 
 
1029 aa  68.9  0.00000000002  Saccharophagus degradans 2-40  Bacteria  normal  normal 
 
 
-
 
NC_008554  Sfum_0821  response regulator receiver modulated FAD-dependent pyridine nucleotide-disulphide oxidoreductase  33.66 
 
 
1139 aa  69.3  0.00000000002  Syntrophobacter fumaroxidans MPOB  Bacteria  normal  normal  0.187038 
 
 
-
 
NC_002939  GSU0598  sigma-54 dependent DNA-binding response regulator  31.78 
 
 
470 aa  68.6  0.00000000003  Geobacter sulfurreducens PCA  Bacteria  normal  0.885444  n/a   
 
 
-
 
NC_010512  Bcenmc03_6441  response regulator receiver modulated metal dependent phosphohydrolase  35.29 
 
 
470 aa  68.6  0.00000000003  Burkholderia cenocepacia MC0-3  Bacteria  normal  normal 
 
 
-
 
NC_009675  Anae109_2439  response regulator receiver protein  36.52 
 
 
238 aa  68.2  0.00000000003  Anaeromyxobacter sp. Fw109-5  Bacteria  normal  0.762702  normal  0.846145 
 
 
-
 
NC_011146  Gbem_0671  two component, sigma54 specific, transcriptional regulator, Fis family  33.33 
 
 
469 aa  68.2  0.00000000003  Geobacter bemidjiensis Bem  Bacteria  normal  n/a   
 
 
-
 
NC_012918  GM21_0684  two component, sigma54 specific, transcriptional regulator, Fis family  33.33 
 
 
469 aa  68.6  0.00000000003  Geobacter sp. M21  Bacteria  n/a    hitchhiker  0.0000000000150794 
 
 
-
 
NC_011769  DvMF_2107  response regulator receiver protein  33.91 
 
 
768 aa  68.6  0.00000000003  Desulfovibrio vulgaris str. 'Miyazaki F'  Bacteria  n/a    normal 
 
 
-
 
NC_009675  Anae109_0732  two component, sigma54 specific, Fis family transcriptional regulator  37 
 
 
471 aa  68.2  0.00000000004  Anaeromyxobacter sp. Fw109-5  Bacteria  normal  0.121473  normal 
 
 
-
 
NC_007298  Daro_2923  two component, sigma54 specific, Fis family transcriptional regulator  33.33 
 
 
450 aa  68.2  0.00000000004  Dechloromonas aromatica RCB  Bacteria  normal  normal  0.726219 
 
 
-
 
NC_010581  Bind_3644  response regulator receiver protein  36.63 
 
 
127 aa  68.2  0.00000000004  Beijerinckia indica subsp. indica ATCC 9039  Bacteria  hitchhiker  0.00272169  normal  0.799381 
 
 
-
 
NC_007908  Rfer_1375  CheA signal transduction histidine kinases  35.4 
 
 
1888 aa  68.2  0.00000000004  Rhodoferax ferrireducens T118  Bacteria  normal  n/a   
 
 
-
 
NC_008009  Acid345_2604  two component, sigma54 specific, Fis family transcriptional regulator  35.29 
 
 
459 aa  68.2  0.00000000004  Candidatus Koribacter versatilis Ellin345  Bacteria  normal  normal 
 
 
-
 
NC_008346  Swol_2412  response regulator receiver protein  34.62 
 
 
123 aa  68.2  0.00000000004  Syntrophomonas wolfei subsp. wolfei str. Goettingen  Bacteria  normal  0.18168  n/a   
 
 
-
 
NC_011146  Gbem_2805  two component, sigma54 specific, transcriptional regulator, Fis family  34.91 
 
 
478 aa  67.8  0.00000000005  Geobacter bemidjiensis Bem  Bacteria  normal  0.228775  n/a   
 
 
-
 
NC_012918  GM21_1405  two component, sigma54 specific, transcriptional regulator, Fis family  34.91 
 
 
478 aa  67.8  0.00000000005  Geobacter sp. M21  Bacteria  n/a    hitchhiker  0.0000117702 
 
 
-
 
NC_010424  Daud_1908  histidine kinase  33.96 
 
 
772 aa  67.8  0.00000000005  Candidatus Desulforudis audaxviator MP104C  Bacteria  normal  0.0199543  n/a   
 
 
-
 
NC_007298  Daro_0966  type II secretion system protein E  34.31 
 
 
746 aa  67.4  0.00000000006  Dechloromonas aromatica RCB  Bacteria  normal  normal  0.783688 
 
 
-
 
NC_009483  Gura_1886  diguanylate cyclase  35 
 
 
462 aa  67.4  0.00000000006  Geobacter uraniireducens Rf4  Bacteria  normal  n/a   
 
 
-
 
NC_009512  Pput_3749  histidine kinase  37.39 
 
 
935 aa  67.4  0.00000000006  Pseudomonas putida F1  Bacteria  normal  normal 
 
 
-
 
NC_007519  Dde_2370  multi-sensor hybrid histidine kinase  36.07 
 
 
795 aa  67.4  0.00000000006  Desulfovibrio desulfuricans subsp. desulfuricans str. G20  Bacteria  normal  0.0114838  n/a   
 
 
-
 
NC_002939  GSU1003  nitrogen regulation protein NR(I)  36.63 
 
 
481 aa  67.4  0.00000000007  Geobacter sulfurreducens PCA  Bacteria  normal  0.158383  n/a   
 
 
-
 
NC_007517  Gmet_2453  two component, sigma54 specific, Fis family transcriptional regulator  33.66 
 
 
461 aa  67.4  0.00000000007  Geobacter metallireducens GS-15  Bacteria  hitchhiker  0.0000196128  normal 
 
 
-
 
NC_008062  Bcen_5575  response regulator receiver modulated metal dependent phosphohydrolase  34.31 
 
 
472 aa  67.4  0.00000000007  Burkholderia cenocepacia AU 1054  Bacteria  normal  n/a   
 
 
-
 
NC_008544  Bcen2424_5939  response regulator receiver modulated metal dependent phosphohydrolase  34.31 
 
 
472 aa  67.4  0.00000000007  Burkholderia cenocepacia HI2424  Bacteria  normal  normal  0.862183 
 
 
-
 
NC_011145  AnaeK_0606  response regulator receiver modulated GAF sensor protein  37.29 
 
 
622 aa  67  0.00000000008  Anaeromyxobacter sp. K  Bacteria  normal  n/a   
 
 
-
 
NC_013216  Dtox_1973  response regulator receiver protein  31.9 
 
 
127 aa  67  0.00000000008  Desulfotomaculum acetoxidans DSM 771  Bacteria  hitchhiker  0.00115006  hitchhiker  0.0000141072 
 
 
-
 
NC_009483  Gura_0916  two component, sigma-54 specific, Fis family transcriptional regulator  33.96 
 
 
480 aa  67  0.00000000008  Geobacter uraniireducens Rf4  Bacteria  normal  n/a   
 
 
-
 
NC_007760  Adeh_0571  putative GAF sensor protein  37.29 
 
 
622 aa  67  0.00000000009  Anaeromyxobacter dehalogenans 2CP-C  Bacteria  normal  n/a   
 
 
-
 
NC_007760  Adeh_2009  two component, sigma54 specific, Fis family transcriptional regulator  34.65 
 
 
463 aa  67  0.00000000009  Anaeromyxobacter dehalogenans 2CP-C  Bacteria  normal  n/a   
 
 
-
 
NC_011891  A2cp1_0598  response regulator receiver modulated GAF sensor protein  37.29 
 
 
622 aa  67  0.00000000009  Anaeromyxobacter dehalogenans 2CP-1  Bacteria  normal  0.592678  n/a   
 
 
-
 
NC_013173  Dbac_1382  histidine kinase  32.48 
 
 
912 aa  67  0.00000000009  Desulfomicrobium baculatum DSM 4028  Bacteria  normal  n/a   
 
 
-
 
NC_008347  Mmar10_2507  response regulator receiver protein  35.78 
 
 
121 aa  67  0.00000000009  Maricaulis maris MCS10  Bacteria  normal  normal 
 
 
-
 
NC_007005  Psyr_0492  response regulator receiver:CheW-like protein:ATP-binding region, ATPase-like:Hpt  35.4 
 
 
1992 aa  66.2  0.0000000001  Pseudomonas syringae pv. syringae B728a  Bacteria  normal  normal 
 
 
-
 
NC_007650  BTH_II0731  response regulator  38.46 
 
 
476 aa  66.6  0.0000000001  Burkholderia thailandensis E264  Bacteria  normal  n/a   
 
 
-
 
NC_008554  Sfum_3765  two component, sigma54 specific, Fis family transcriptional regulator  36.45 
 
 
463 aa  66.2  0.0000000001  Syntrophobacter fumaroxidans MPOB  Bacteria  decreased coverage  0.000821276  normal 
 
 
-
 
NC_011992  Dtpsy_2897  CheA signal transduction histidine kinase  34.51 
 
 
2026 aa  66.2  0.0000000001  Acidovorax ebreus TPSY  Bacteria  normal  0.855039  n/a   
 
 
-
 
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