More than 300 homologs were found in PanDaTox collection
for query gene CA2559_12543 on replicon NC_014230
Organism: Croceibacter atlanticus HTCC2559



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Replicon accession
Locus tag
Product
% identity
Alignment on query gene
Alignment on homolog gene
Length
Bit score

E-value
Organism name
Kingdom
Plasmid clonability
Plasmid unclonability p-value
Fosmid clonability
Fosmid unclonability p-value
Coverage Plot
PanDaTox homologs
Experimental validation
NC_014230  CA2559_12543  Transcriptional regulator  100 
 
 		 207 aa  414  9.999999999999999e-116  Croceibacter atlanticus HTCC2559  Bacteria  normal  0.204025  n/a   
 
 
-
 
NC_009457  VC0395_A0896  LuxR family transcriptional regulator  41.87 
 
 		 216 aa  159  3e-38  Vibrio cholerae O395  Bacteria  normal  1  n/a   
 
 
-
 
NC_013456  VEA_003136  transcriptional regulator LuxR family protein  40.89 
 
 		 212 aa  154  1e-36  Vibrio sp. Ex25  Bacteria  normal  0.12843  n/a   
 
 
-
 
NC_002936  DET1063  LuxR family DNA-binding response regulator  36.19 
 
 		 232 aa  141  5e-33  Dehalococcoides ethenogenes 195  Bacteria  normal  0.815436  n/a   
 
 
-
 
NC_006349  BMAA2071  LuxR family DNA-binding response regulator  37.19 
 
 		 215 aa  140  9.999999999999999e-33  Burkholderia mallei ATCC 23344  Bacteria  normal  1  n/a   
 
 
-
 
NC_007435  BURPS1710b_A1463  LuxR family DNA-binding response regulator  37.19 
 
 		 215 aa  140  9.999999999999999e-33  Burkholderia pseudomallei 1710b  Bacteria  normal  1  n/a   
 
 
-
 
NC_008784  BMASAVP1_1100  LuxR family DNA-binding response regulator  37.19 
 
 		 215 aa  140  9.999999999999999e-33  Burkholderia mallei SAVP1  Bacteria  normal  1  n/a   
 
 
-
 
NC_008835  BMA10229_1379  LuxR family DNA-binding response regulator  37.19 
 
 		 215 aa  140  9.999999999999999e-33  Burkholderia mallei NCTC 10229  Bacteria  normal  1  n/a   
 
 
-
 
NC_009075  BURPS668_A3248  LuxR family DNA-binding response regulator  37.19 
 
 		 215 aa  140  9.999999999999999e-33  Burkholderia pseudomallei 668  Bacteria  normal  0.780539  n/a   
 
 
-
 
NC_009079  BMA10247_A2364  LuxR family DNA-binding response regulator  37.19 
 
 		 215 aa  140  9.999999999999999e-33  Burkholderia mallei NCTC 10247  Bacteria  normal  1  n/a   
 
 
-
 
NC_007650  BTH_II2335  LuxR family DNA-binding response regulator  37.19 
 
 		 215 aa  140  1.9999999999999998e-32  Burkholderia thailandensis E264  Bacteria  normal  1  n/a   
 
 
-
 
NC_009455  DehaBAV1_0945  two component LuxR family transcriptional regulator  35.75 
 
 		 232 aa  139  1.9999999999999998e-32  Dehalococcoides sp. BAV1  Bacteria  normal  1  n/a   
 
 
-
 
NC_007644  Moth_0975  two component LuxR family transcriptional regulator  37.86 
 
 		 222 aa  139  3e-32  Moorella thermoacetica ATCC 39073  Bacteria  normal  1  normal  1 
 
 
-
 
NC_009972  Haur_0983  two component LuxR family transcriptional regulator  33.99 
 
 		 213 aa  139  3.9999999999999997e-32  Herpetosiphon aurantiacus ATCC 23779  Bacteria  normal  1  n/a   
 
 
-
 
NC_009078  BURPS1106A_A3133  LuxR family DNA-binding response regulator  36.68 
 
 		 215 aa  139  3.9999999999999997e-32  Burkholderia pseudomallei 1106a  Bacteria  normal  1  n/a   
 
 
-
 
NC_002976  SERP1981  transcriptional regulatory protein DegU, putative  36.32 
 
 		 218 aa  138  6e-32  Staphylococcus epidermidis RP62A  Bacteria  normal  1  n/a   
 
 
-
 
NC_013552  DhcVS_934  DNA-binding response regulator, LuxR family  35.71 
 
 		 232 aa  138  6e-32  Dehalococcoides sp. VS  Bacteria  normal  0.717523  n/a   
 
 
-
 
NC_013132  Cpin_2907  two component transcriptional regulator, LuxR family  34.78 
 
 		 222 aa  138  7e-32  Chitinophaga pinensis DSM 2588  Bacteria  normal  0.0590247  normal  1 
 
 
-
 
NC_012918  GM21_0467  two component transcriptional regulator, LuxR family  37.68 
 
 		 216 aa  138  7e-32  Geobacter sp. M21  Bacteria  n/a    hitchhiker  0.000507383 
 
 
-
 
NC_009943  Dole_0029  two component LuxR family transcriptional regulator  36.23 
 
 		 214 aa  137  8.999999999999999e-32  Desulfococcus oleovorans Hxd3  Bacteria  normal  0.317943  n/a   
 
 
-
 
NC_007511  Bcep18194_B0026  two component LuxR family transcriptional regulator  36.68 
 
 		 214 aa  137  1e-31  Burkholderia sp. 383  Bacteria  normal  1  normal  1 
 
 
-
 
NC_008061  Bcen_5187  two component LuxR family transcriptional regulator  36.68 
 
 		 214 aa  137  1e-31  Burkholderia cenocepacia AU 1054  Bacteria  normal  1  n/a   
 
 
-
 
NC_008391  Bamb_4946  two component LuxR family transcriptional regulator  36.68 
 
 		 214 aa  137  1e-31  Burkholderia ambifaria AMMD  Bacteria  normal  1  normal  0.0203352 
 
 
-
 
NC_008543  Bcen2424_5672  two component LuxR family transcriptional regulator  36.68 
 
 		 214 aa  137  1e-31  Burkholderia cenocepacia HI2424  Bacteria  normal  1  hitchhiker  0.00685344 
 
 
-
 
NC_010552  BamMC406_5498  two component LuxR family transcriptional regulator  36.68 
 
 		 214 aa  137  1e-31  Burkholderia ambifaria MC40-6  Bacteria  normal  1  hitchhiker  0.00509748 
 
 
-
 
NC_010515  Bcenmc03_4563  two component LuxR family transcriptional regulator  36.68 
 
 		 214 aa  137  1e-31  Burkholderia cenocepacia MC0-3  Bacteria  normal  1  normal  0.0560765 
 
 
-
 
NC_011146  Gbem_0451  two component transcriptional regulator, LuxR family  36.23 
 
 		 216 aa  136  2e-31  Geobacter bemidjiensis Bem  Bacteria  normal  1  n/a   
 
 
-
 
NC_008255  CHU_1317  response regulator  36.28 
 
 		 220 aa  136  2e-31  Cytophaga hutchinsonii ATCC 33406  Bacteria  normal  0.500574  normal  0.0503905 
 
 
-
 
NC_013730  Slin_0700  two component transcriptional regulator, LuxR family  34.88 
 
 		 218 aa  135  3.0000000000000003e-31  Spirosoma linguale DSM 74  Bacteria  hitchhiker  0.00980919  normal  0.316207 
 
 
-
 
NC_010002  Daci_5322  two component LuxR family transcriptional regulator  31.19 
 
 		 220 aa  135  5e-31  Delftia acidovorans SPH-1  Bacteria  normal  1  normal  0.929677 
 
 
-
 
NC_010625  Bphy_6469  two component LuxR family transcriptional regulator  36.68 
 
 		 213 aa  135  5e-31  Burkholderia phymatum STM815  Bacteria  normal  1  normal  0.53826 
 
 
-
 
NC_014212  Mesil_2510  two component transcriptional regulator, LuxR family  37.86 
 
 		 217 aa  135  6.0000000000000005e-31  Meiothermus silvanus DSM 9946  Bacteria  normal  1  normal  1 
 
 
-
 
NC_003910  CPS_1406  DNA-binding response regulator  37.62 
 
 		 215 aa  135  6.0000000000000005e-31  Colwellia psychrerythraea 34H  Bacteria  normal  0.253896  n/a   
 
 
-
 
NC_008009  Acid345_4290  two component LuxR family transcriptional regulator  34.47 
 
 		 218 aa  134  8e-31  Candidatus Koribacter versatilis Ellin345  Bacteria  normal  1  normal  1 
 
 
-
 
NC_013061  Phep_2962  response regulator receiver  33.01 
 
 		 206 aa  134  8e-31  Pedobacter heparinus DSM 2366  Bacteria  normal  0.117851  normal  1 
 
 
-
 
NC_002939  GSU0254  LuxR family DNA-binding response regulator  34.62 
 
 		 215 aa  133  9.999999999999999e-31  Geobacter sulfurreducens PCA  Bacteria  normal  1  n/a   
 
 
-
 
NC_009632  SaurJH1_2463  response regulator receiver  36.02 
 
 		 217 aa  134  9.999999999999999e-31  Staphylococcus aureus subsp. aureus JH1  Bacteria  normal  1  n/a   
 
 
-
 
NC_013946  Mrub_0806  two component LuxR family transcriptional regulator  37.86 
 
 		 216 aa  134  9.999999999999999e-31  Meiothermus ruber DSM 1279  Bacteria  normal  1  normal  1 
 
 
-
 
NC_013530  Xcel_0239  two component transcriptional regulator, LuxR family  35.32 
 
 		 230 aa  134  9.999999999999999e-31  Xylanimonas cellulosilytica DSM 15894  Bacteria  normal  1  n/a   
 
 
-
 
NC_009654  Mmwyl1_0679  two component LuxR family transcriptional regulator  33.82 
 
 		 213 aa  134  9.999999999999999e-31  Marinomonas sp. MWYL1  Bacteria  normal  1  normal  1 
 
 
-
 
NC_009487  SaurJH9_2415  two component LuxR family transcriptional regulator  36.02 
 
 		 217 aa  134  9.999999999999999e-31  Staphylococcus aureus subsp. aureus JH9  Bacteria  normal  1  n/a   
 
 
-
 
NC_014165  Tbis_0775  LuxR family two component transcriptional regulator  33.33 
 
 		 234 aa  133  1.9999999999999998e-30  Thermobispora bispora DSM 43833  Bacteria  normal  1  normal  0.336237 
 
 
-
 
NC_010627  Bphy_7761  two component LuxR family transcriptional regulator  34.17 
 
 		 213 aa  133  1.9999999999999998e-30  Burkholderia phymatum STM815  Bacteria  normal  1  normal  1 
 
 
-
 
NC_010086  Bmul_3186  two component LuxR family transcriptional regulator  36.68 
 
 		 214 aa  133  1.9999999999999998e-30  Burkholderia multivorans ATCC 17616  Bacteria  normal  1  normal  0.10411 
 
 
-
 
NC_011772  BCG9842_B5417  DNA-binding response regulator  34.93 
 
 		 215 aa  133  1.9999999999999998e-30  Bacillus cereus G9842  Bacteria  normal  1  normal  1 
 
 
-
 
NC_008228  Patl_2290  two component LuxR family transcriptional regulator  39.51 
 
 		 215 aa  132  1.9999999999999998e-30  Pseudoalteromonas atlantica T6c  Bacteria  normal  1  n/a   
 
 
-
 
NC_011884  Cyan7425_3249  two component transcriptional regulator, LuxR family  35 
 
 		 211 aa  132  1.9999999999999998e-30  Cyanothece sp. PCC 7425  Bacteria  normal  0.414819  normal  0.558116 
 
 
-
 
NC_013730  Slin_6441  two component transcriptional regulator, LuxR family  34.13 
 
 		 213 aa  133  1.9999999999999998e-30  Spirosoma linguale DSM 74  Bacteria  normal  1  normal  1 
 
 
-
 
NC_004310  BR0342  LuxR family DNA-binding response regulator  33.5 
 
 		 213 aa  132  3e-30  Brucella suis 1330  Bacteria  normal  0.0601944  n/a   
 
 
-
 
NC_009505  BOV_0358  LuxR family DNA-binding response regulator  33.5 
 
 		 213 aa  132  3e-30  Brucella ovis ATCC 25840  Bacteria  normal  0.363  n/a   
 
 
-
 
NC_007777  Francci3_1039  two component LuxR family transcriptional regulator  32.39 
 
 		 238 aa  132  3e-30  Frankia sp. CcI3  Bacteria  normal  1  normal  0.135118 
 
 
-
 
NC_011662  Tmz1t_1954  two component transcriptional regulator, LuxR family  34.3 
 
 		 220 aa  132  3e-30  Thauera sp. MZ1T  Bacteria  normal  0.228638  n/a   
 
 
-
 
NC_011830  Dhaf_1205  two component transcriptional regulator, LuxR family  35.61 
 
 		 212 aa  132  3.9999999999999996e-30  Desulfitobacterium hafniense DCB-2  Bacteria  normal  1  n/a   
 
 
-
 
NC_011368  Rleg2_4527  two component transcriptional regulator, LuxR family  33.33 
 
 		 223 aa  132  3.9999999999999996e-30  Rhizobium leguminosarum bv. trifolii WSM2304  Bacteria  normal  1  normal  0.658241 
 
 
-
 
NC_008554  Sfum_1664  two component LuxR family transcriptional regulator  34.78 
 
 		 218 aa  132  3.9999999999999996e-30  Syntrophobacter fumaroxidans MPOB  Bacteria  normal  0.49018  normal  1 
 
 
-
 
NC_011830  Dhaf_1194  two component transcriptional regulator, LuxR family  34.93 
 
 		 217 aa  132  5e-30  Desulfitobacterium hafniense DCB-2  Bacteria  normal  0.272513  n/a   
 
 
-
 
NC_011725  BCB4264_A5535  DNA-binding response regulator  35.41 
 
 		 215 aa  131  6.999999999999999e-30  Bacillus cereus B4264  Bacteria  normal  1  n/a   
 
 
-
 
NC_009441  Fjoh_1987  two component LuxR family transcriptional regulator  33.66 
 
 		 213 aa  131  6.999999999999999e-30  Flavobacterium johnsoniae UW101  Bacteria  normal  0.429674  n/a   
 
 
-
 
NC_010725  Mpop_3747  two component transcriptional regulator, LuxR family  32.7 
 
 		 221 aa  130  1.0000000000000001e-29  Methylobacterium populi BJ001  Bacteria  normal  1  normal  1 
 
 
-
 
NC_008255  CHU_1266  two-component response regulator  35.89 
 
 		 227 aa  130  1.0000000000000001e-29  Cytophaga hutchinsonii ATCC 33406  Bacteria  normal  0.847879  normal  0.913346 
 
 
-
 
NC_010505  Mrad2831_3042  two component LuxR family transcriptional regulator  32.86 
 
 		 222 aa  130  1.0000000000000001e-29  Methylobacterium radiotolerans JCM 2831  Bacteria  normal  1  normal  0.280021 
 
 
-
 
NC_011658  BCAH187_A5591  DNA-binding response regulator  34.93 
 
 		 215 aa  130  1.0000000000000001e-29  Bacillus cereus AH187  Bacteria  normal  1  n/a   
 
 
-
 
NC_002939  GSU0682  LuxR family DNA-binding response regulator  34.29 
 
 		 215 aa  129  2.0000000000000002e-29  Geobacter sulfurreducens PCA  Bacteria  normal  0.874366  n/a   
 
 
-
 
NC_003909  BCE_5540  DNA-binding response regulator  34.93 
 
 		 215 aa  129  2.0000000000000002e-29  Bacillus cereus ATCC 10987  Bacteria  normal  1  n/a   
 
 
-
 
NC_010571  Oter_1700  two component LuxR family transcriptional regulator  34.13 
 
 		 213 aa  130  2.0000000000000002e-29  Opitutus terrae PB90-1  Bacteria  normal  1  normal  0.226192 
 
 
-
 
NC_007519  Dde_0977  two component LuxR family transcriptional regulator  33.65 
 
 		 223 aa  130  2.0000000000000002e-29  Desulfovibrio desulfuricans subsp. desulfuricans str. G20  Bacteria  decreased coverage  0.00800748  n/a   
 
 
-
 
NC_009921  Franean1_5512  two component LuxR family transcriptional regulator  32.08 
 
 		 250 aa  129  2.0000000000000002e-29  Frankia sp. EAN1pec  Bacteria  normal  1  normal  0.631776 
 
 
-
 
NC_012034  Athe_2627  two component transcriptional regulator, LuxR family  36.1 
 
 		 211 aa  130  2.0000000000000002e-29  Anaerocellum thermophilum DSM 6725  Bacteria  normal  1  n/a   
 
 
-
 
NC_010524  Lcho_1782  two component LuxR family transcriptional regulator  35.47 
 
 		 214 aa  130  2.0000000000000002e-29  Leptothrix cholodnii SP-6  Bacteria  n/a    hitchhiker  0.000000360675 
 
 
-
 
NC_013730  Slin_4823  two component transcriptional regulator, LuxR family  31.37 
 
 		 214 aa  129  3e-29  Spirosoma linguale DSM 74  Bacteria  normal  0.103693  normal  0.11387 
 
 
-
 
NC_013132  Cpin_2387  two component transcriptional regulator, LuxR family  30.58 
 
 		 207 aa  129  3e-29  Chitinophaga pinensis DSM 2588  Bacteria  normal  0.132486  normal  0.384012 
 
 
-
 
NC_008825  Mpe_A1026  response regulator protein  33.5 
 
 		 217 aa  129  3e-29  Methylibium petroleiphilum PM1  Bacteria  normal  1  normal  1 
 
 
-
 
NC_002939  GSU1293  LuxR family DNA-binding response regulator  31.25 
 
 		 216 aa  129  4.0000000000000003e-29  Geobacter sulfurreducens PCA  Bacteria  normal  1  n/a   
 
 
-
 
NC_012856  Rpic12D_3406  two component transcriptional regulator, LuxR family  34.33 
 
 		 214 aa  129  4.0000000000000003e-29  Ralstonia pickettii 12D  Bacteria  normal  0.588591  normal  1 
 
 
-
 
NC_010184  BcerKBAB4_5205  two component LuxR family transcriptional regulator  35.1 
 
 		 215 aa  129  4.0000000000000003e-29  Bacillus weihenstephanensis KBAB4  Bacteria  normal  1  n/a   
 
 
-
 
NC_013730  Slin_5409  two component transcriptional regulator, LuxR family  34.09 
 
 		 223 aa  129  4.0000000000000003e-29  Spirosoma linguale DSM 74  Bacteria  hitchhiker  0.00220575  normal  1 
 
 
-
 
NC_013510  Tcur_2302  two component transcriptional regulator, LuxR family  34.58 
 
 		 226 aa  129  4.0000000000000003e-29  Thermomonospora curvata DSM 43183  Bacteria  normal  0.0191252  n/a   
 
 
-
 
NC_010682  Rpic_3729  two component transcriptional regulator, LuxR family  33.83 
 
 		 214 aa  128  5.0000000000000004e-29  Ralstonia pickettii 12J  Bacteria  normal  1  normal  1 
 
 
-
 
NC_013510  Tcur_0154  two component transcriptional regulator, LuxR family  33.81 
 
 		 244 aa  128  6e-29  Thermomonospora curvata DSM 43183  Bacteria  normal  1  n/a   
 
 
-
 
NC_010511  M446_5717  two component LuxR family transcriptional regulator  31.73 
 
 		 220 aa  128  6e-29  Methylobacterium sp. 4-46  Bacteria  normal  0.873964  hitchhiker  0.00405289 
 
 
-
 
NC_013739  Cwoe_1616  two component transcriptional regulator, LuxR family  32.84 
 
 		 229 aa  128  7.000000000000001e-29  Conexibacter woesei DSM 14684  Bacteria  normal  1  normal  1 
 
 
-
 
NC_009675  Anae109_1810  two component LuxR family transcriptional regulator  35.1 
 
 		 218 aa  128  7.000000000000001e-29  Anaeromyxobacter sp. Fw109-5  Bacteria  normal  1  normal  1 
 
 
-
 
NC_005945  BAS5263  DNA-binding response regulator  34.45 
 
 		 215 aa  127  9.000000000000001e-29  Bacillus anthracis str. Sterne  Bacteria  normal  0.24037  n/a   
 
 
-
 
NC_005957  BT9727_5091  response regulator  34.45 
 
 		 215 aa  127  9.000000000000001e-29  Bacillus thuringiensis serovar konkukian str. 97-27  Bacteria  normal  1  n/a   
 
 
-
 
NC_011773  BCAH820_5506  DNA-binding response regulator  34.45 
 
 		 215 aa  127  9.000000000000001e-29  Bacillus cereus AH820  Bacteria  n/a    normal  1 
 
 
-
 
NC_006274  BCZK5108  response regulator  34.45 
 
 		 215 aa  127  9.000000000000001e-29  Bacillus cereus E33L  Bacteria  decreased coverage  0.00235048  n/a   
 
 
-
 
NC_007530  GBAA_5661  DNA-binding response regulator  34.45 
 
 		 215 aa  127  9.000000000000001e-29  Bacillus anthracis str. 'Ames Ancestor'  Bacteria  normal  1  n/a   
 
 
-
 
NC_007347  Reut_A3419  LuxR response regulator receiver  33.5 
 
 		 231 aa  127  1.0000000000000001e-28  Ralstonia eutropha JMP134  Bacteria  normal  0.393456  n/a   
 
 
-
 
NC_010676  Bphyt_4476  two component transcriptional regulator, LuxR family  35.68 
 
 		 215 aa  127  1.0000000000000001e-28  Burkholderia phytofirmans PsJN  Bacteria  normal  1  normal  1 
 
 
-
 
NC_008148  Rxyl_2629  two component LuxR family transcriptional regulator  31.25 
 
 		 232 aa  127  1.0000000000000001e-28  Rubrobacter xylanophilus DSM 9941  Bacteria  normal  0.312922  n/a   
 
 
-
 
NC_013595  Sros_0553  response regulator receiver protein  35.75 
 
 		 213 aa  127  1.0000000000000001e-28  Streptosporangium roseum DSM 43021  Bacteria  normal  0.82888  normal  1 
 
 
-
 
NC_013093  Amir_6235  two component transcriptional regulator, LuxR family  34.76 
 
 		 215 aa  126  2.0000000000000002e-28  Actinosynnema mirum DSM 43827  Bacteria  normal  0.502704  n/a   
 
 
-
 
NC_008609  Ppro_3163  two component LuxR family transcriptional regulator  35.82 
 
 		 203 aa  126  2.0000000000000002e-28  Pelobacter propionicus DSM 2379  Bacteria  normal  0.932633  n/a   
 
 
-
 
NC_013595  Sros_1417  response regulator receiver protein  33.33 
 
 		 234 aa  127  2.0000000000000002e-28  Streptosporangium roseum DSM 43021  Bacteria  normal  1  normal  0.0224272 
 
 
-
 
NC_009441  Fjoh_0036  two component LuxR family transcriptional regulator  36.02 
 
 		 221 aa  126  2.0000000000000002e-28  Flavobacterium johnsoniae UW101  Bacteria  normal  0.0464925  n/a   
 
 
-
 
NC_009483  Gura_2780  two component LuxR family transcriptional regulator  33.98 
 
 		 226 aa  126  3e-28  Geobacter uraniireducens Rf4  Bacteria  normal  1  n/a   
 
 
-
 
NC_013525  Tter_0300  two component transcriptional regulator, LuxR family  33.17 
 
 		 224 aa  125  3e-28  Thermobaculum terrenum ATCC BAA-798  Bacteria  n/a    n/a   
 
 
-
 
NC_008044  TM1040_0876  two component LuxR family transcriptional regulator  35.82 
 
 		 233 aa  125  3e-28  Ruegeria sp. TM1040  Bacteria  normal  0.481499  normal  0.345787 
 
 
-
 
NC_013205  Aaci_0385  two component transcriptional regulator, LuxR family  32.35 
 
 		 224 aa  125  3e-28  Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446  Bacteria  normal  1  n/a   
 
 
-
 
NC_008255  CHU_0105  two component LuxR family transcriptional regulator  34.78 
 
 		 215 aa  125  3e-28  Cytophaga hutchinsonii ATCC 33406  Bacteria  normal  0.0303042  normal  0.309888 
 
 
-
 
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